RNA–Protein interactions for RNA: ENST00000621897.1

BRCA1-229, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 375 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-229ENST00000621897 DHRSXQ8N5I4 330 aa2.84□□□□□ -1.95
BRCA1-229ENST00000621897 TRAM1L1Q8N609 369 aa2.84□□□□□ -1.95
BRCA1-229ENST00000621897 NOXO1Q8NFA2 376 aa2.84□□□□□ -1.95
BRCA1-229ENST00000621897 OR56A4Q8NGH8 313 aa2.84□□□□□ -1.95
BRCA1-229ENST00000621897 OR2Y1Q8NGV0 311 aa2.84□□□□□ -1.95
BRCA1-229ENST00000621897 ACTL9Q8TC94 416 aa2.84□□□□□ -1.95
BRCA1-229ENST00000621897 DTD1Q8TEA8 209 aa2.84□□□□□ -1.95
BRCA1-229ENST00000621897 PYDC1Q8WXC3 89 aa2.84□□□□□ -1.95
BRCA1-229ENST00000621897 PACRGQ96M98 296 aaPredicted RBP2.84□□□□□ -1.95
BRCA1-229ENST00000621897 RNF145Q96MT1 663 aa2.84□□□□□ -1.95
BRCA1-229ENST00000621897 UCK2Q9BZX2 261 aa2.84□□□□□ -1.95
BRCA1-229ENST00000621897 NXF5Q9H1B4 397 aaKnown RBP2.84□□□□□ -1.95
BRCA1-229ENST00000621897 PPA2Q9H2U2 334 aa2.84□□□□□ -1.95
BRCA1-229ENST00000621897 ALG9Q9H6U8 611 aa2.84□□□□□ -1.95
BRCA1-229ENST00000621897 PLEKHJ1Q9NW61 149 aa2.84□□□□□ -1.95
BRCA1-229ENST00000621897 TUBGCP4Q9UGJ1 667 aa2.84□□□□□ -1.95
BRCA1-229ENST00000621897 STOML2Q9UJZ1 356 aa2.84□□□□□ -1.95
BRCA1-229ENST00000621897 SLC17A4Q9Y2C5 497 aa2.84□□□□□ -1.95
BRCA1-229ENST00000621897 AP3M1Q9Y2T2 418 aa2.84□□□□□ -1.95
BRCA1-229ENST00000621897 EIF3AQ14152 1382 aaKnown RBP2.84□□□□□ -1.96
BRCA1-229ENST00000621897 RAB3GAP2Q9H2M9 1393 aa2.84□□□□□ -1.96
BRCA1-229ENST00000621897 SYNJ2O15056 1496 aa2.84□□□□□ -1.96
BRCA1-229ENST00000621897 GTF3C1Q12789 2109 aa2.83□□□□□ -1.96
BRCA1-229ENST00000621897 SLC5A10A0PJK1 596 aa2.83□□□□□ -1.96
BRCA1-229ENST00000621897 FUOMA2VDF0 154 aa2.83□□□□□ -1.96
BRCA1-229ENST00000621897 PSMB11A5LHX3 300 aa2.83□□□□□ -1.96
BRCA1-229ENST00000621897 B4DXG7 233 aa2.83□□□□□ -1.96
BRCA1-229ENST00000621897 TMEM238C9JI98 176 aa2.83□□□□□ -1.96
BRCA1-229ENST00000621897 G3V3Y1 287 aa2.83□□□□□ -1.96
BRCA1-229ENST00000621897 DCTN6O00399 190 aa2.83□□□□□ -1.96
BRCA1-229ENST00000621897 CASKO14936 926 aa2.83□□□□□ -1.96
BRCA1-229ENST00000621897 SLC16A4O15374 487 aa2.83□□□□□ -1.96
BRCA1-229ENST00000621897 EFNA2O43921 213 aa2.83□□□□□ -1.96
BRCA1-229ENST00000621897 EIF4E2O60573 245 aaKnown RBP2.83□□□□□ -1.96
BRCA1-229ENST00000621897 SNAPINO95295 136 aa2.83□□□□□ -1.96
BRCA1-229ENST00000621897 PLEKHA8P1O95397 391 aa2.83□□□□□ -1.96
BRCA1-229ENST00000621897 CD160O95971 181 aa2.83□□□□□ -1.96
BRCA1-229ENST00000621897 IFNA5P01569 189 aa2.83□□□□□ -1.96
BRCA1-229ENST00000621897 MMP1P03956 469 aa2.83□□□□□ -1.96
BRCA1-229ENST00000621897 HSPB1P04792 205 aaKnown RBP2.83□□□□□ -1.96
BRCA1-229ENST00000621897 PSMC3P17980 439 aa2.83□□□□□ -1.96
BRCA1-229ENST00000621897 ZP3P21754 424 aa2.83□□□□□ -1.96
BRCA1-229ENST00000621897 DTYMKP23919 212 aa2.83□□□□□ -1.96
BRCA1-229ENST00000621897 CMA1P23946 247 aa2.83□□□□□ -1.96
BRCA1-229ENST00000621897 HMGB2P26583 209 aaKnown RBP2.83□□□□□ -1.96
BRCA1-229ENST00000621897 G0S2P27469 103 aa2.83□□□□□ -1.96
BRCA1-229ENST00000621897 COILP38432 576 aaPredicted RBP2.83□□□□□ -1.96
BRCA1-229ENST00000621897 VHLP40337 213 aa2.83□□□□□ -1.96
BRCA1-229ENST00000621897 OPRD1P41143 372 aa2.83□□□□□ -1.96
BRCA1-229ENST00000621897 XCR1P46094 333 aa2.83□□□□□ -1.96
BRCA1-229ENST00000621897 OR1D4P47884 311 aa2.83□□□□□ -1.96
BRCA1-229ENST00000621897 QARSP47897 775 aaKnown RBP2.83□□□□□ -1.96
BRCA1-229ENST00000621897 P2RY4P51582 365 aa2.83□□□□□ -1.96
BRCA1-229ENST00000621897 RAP1GDS1P52306 607 aa2.83□□□□□ -1.96
BRCA1-229ENST00000621897 EFNA3P52797 238 aa2.83□□□□□ -1.96
BRCA1-229ENST00000621897 PKNOX1P55347 436 aa2.83□□□□□ -1.96
BRCA1-229ENST00000621897 WNT4P56705 351 aa2.83□□□□□ -1.96
BRCA1-229ENST00000621897 GNB2P62879 340 aa2.83□□□□□ -1.96
BRCA1-229ENST00000621897 ZNF85Q03923 595 aa2.83□□□□□ -1.96
BRCA1-229ENST00000621897 SCRN3Q0VDG4 424 aa2.83□□□□□ -1.96
BRCA1-229ENST00000621897 PDIA2Q13087 525 aaKnown RBP2.83□□□□□ -1.96
BRCA1-229ENST00000621897 GUK1Q16774 197 aa2.83□□□□□ -1.96
BRCA1-229ENST00000621897 KCTD19Q17RG1 926 aaPredicted RBP2.83□□□□□ -1.96
BRCA1-229ENST00000621897 RPEL1Q2QD12 228 aa2.83□□□□□ -1.96
BRCA1-229ENST00000621897 TMEM249Q2WGJ8 235 aa2.83□□□□□ -1.96
BRCA1-229ENST00000621897 RBM48Q5RL73 367 aaKnown RBP2.83□□□□□ -1.96
BRCA1-229ENST00000621897 BEND6Q5SZJ8 279 aaPredicted RBP2.83□□□□□ -1.96
BRCA1-229ENST00000621897 PRR5LQ6MZQ0 368 aa2.83□□□□□ -1.96
BRCA1-229ENST00000621897 ACSM5Q6NUN0 579 aa2.83□□□□□ -1.96
BRCA1-229ENST00000621897 MBOAT1Q6ZNC8 495 aa2.83□□□□□ -1.96
BRCA1-229ENST00000621897 STOX1Q6ZVD7 989 aa2.83□□□□□ -1.96
BRCA1-229ENST00000621897 SLC51BQ86UW2 128 aa2.83□□□□□ -1.96
BRCA1-229ENST00000621897 UNC93AQ86WB7 457 aa2.83□□□□□ -1.96
BRCA1-229ENST00000621897 CYP4Z2PQ8N1L4 340 aa2.83□□□□□ -1.96
BRCA1-229ENST00000621897 KIF2BQ8N4N8 673 aa2.83□□□□□ -1.96
BRCA1-229ENST00000621897 OR5B17Q8NGF7 314 aa2.83□□□□□ -1.96
BRCA1-229ENST00000621897 OR6K2Q8NGY2 324 aa2.83□□□□□ -1.96
BRCA1-229ENST00000621897 OR5AK3PQ8NH89 298 aa2.83□□□□□ -1.96
BRCA1-229ENST00000621897 TFGQ92734 400 aaPredicted RBP2.83□□□□□ -1.96
BRCA1-229ENST00000621897 RORBQ92753 470 aa2.83□□□□□ -1.96
BRCA1-229ENST00000621897 DLX4Q92988 240 aaPredicted RBP2.83□□□□□ -1.96
BRCA1-229ENST00000621897 ART4Q93070 314 aa2.83□□□□□ -1.96
BRCA1-229ENST00000621897 NTAN1Q96AB6 310 aa2.83□□□□□ -1.96
BRCA1-229ENST00000621897 RPEQ96AT9 228 aa2.83□□□□□ -1.96
BRCA1-229ENST00000621897 CGREF1Q99674 301 aa2.83□□□□□ -1.96
BRCA1-229ENST00000621897 PRRT1Q99946 306 aa2.83□□□□□ -1.96
BRCA1-229ENST00000621897 UTP23Q9BRU9 249 aaKnown RBP2.83□□□□□ -1.96
BRCA1-229ENST00000621897 RAB34Q9BZG1 259 aa2.83□□□□□ -1.96
BRCA1-229ENST00000621897 ZYG11BQ9C0D3 744 aa2.83□□□□□ -1.96
BRCA1-229ENST00000621897 ACTR3CQ9C0K3 210 aaPredicted RBP2.83□□□□□ -1.96
BRCA1-229ENST00000621897 PORCNQ9H237 461 aa2.83□□□□□ -1.96
BRCA1-229ENST00000621897 PATZ1Q9HBE1 687 aaKnown RBP2.83□□□□□ -1.96
BRCA1-229ENST00000621897 NRN1Q9NPD7 142 aa2.83□□□□□ -1.96
BRCA1-229ENST00000621897 DCAF13Q9NV06 445 aaKnown RBP2.83□□□□□ -1.96
BRCA1-229ENST00000621897 PURGQ9UJV8 347 aaKnown RBP2.83□□□□□ -1.96
BRCA1-229ENST00000621897 AK6Q9Y3D8 172 aaKnown RBP2.83□□□□□ -1.96
BRCA1-229ENST00000621897 POLR3HQ9Y535 204 aaPredicted RBP2.83□□□□□ -1.96
BRCA1-229ENST00000621897 WIF1Q9Y5W5 379 aa2.83□□□□□ -1.96
BRCA1-229ENST00000621897 ALG6Q9Y672 507 aa2.83□□□□□ -1.96
BRCA1-229ENST00000621897 MRPS18BQ9Y676 258 aaKnown RBP2.83□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms