RNA–Protein interactions for RNA: ENST00000621271.4

CLTCL1-211, Transcript of clathrin heavy chain like 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLTCL1, Length 5,313 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-211ENST00000621271 OR52H1Q8NGJ2 320 aa8.9□□□□□ -0.98
CLTCL1-211ENST00000621271 RND1Q92730 232 aa8.9□□□□□ -0.98
CLTCL1-211ENST00000621271 FRZBQ92765 325 aa8.9□□□□□ -0.98
CLTCL1-211ENST00000621271 TMEM30AQ9NV96 361 aa8.9□□□□□ -0.98
CLTCL1-211ENST00000621271 NECAP2Q9NVZ3 263 aa8.9□□□□□ -0.98
CLTCL1-211ENST00000621271 SLCO1B1Q9Y6L6 691 aa8.9□□□□□ -0.98
CLTCL1-211ENST00000621271 SIPA1L3O60292 1781 aaPredicted RBP8.9□□□□□ -0.98
CLTCL1-211ENST00000621271 TNRC6CQ9HCJ0 1690 aaKnown RBP8.9□□□□□ -0.98
CLTCL1-211ENST00000621271 MYO5AQ9Y4I1 1855 aaKnown RBP8.9□□□□□ -0.98
CLTCL1-211ENST00000621271 A0A1W2PS29 197 aa8.9□□□□□ -0.98
CLTCL1-211ENST00000621271 PRKNO60260 465 aaPredicted RBP8.9□□□□□ -0.98
CLTCL1-211ENST00000621271 UBL3O95164 117 aa8.9□□□□□ -0.98
CLTCL1-211ENST00000621271 ZIC2O95409 532 aaPredicted RBP8.9□□□□□ -0.98
CLTCL1-211ENST00000621271 GABRA1P14867 456 aa8.9□□□□□ -0.98
CLTCL1-211ENST00000621271 ID4P47928 161 aa8.9□□□□□ -0.98
CLTCL1-211ENST00000621271 CLDN12P56749 244 aa8.9□□□□□ -0.98
CLTCL1-211ENST00000621271 HFEQ30201 348 aa8.9□□□□□ -0.98
CLTCL1-211ENST00000621271 EMC4Q5J8M3 183 aa8.9□□□□□ -0.98
CLTCL1-211ENST00000621271 FAM122CQ6P4D5 195 aa8.9□□□□□ -0.98
CLTCL1-211ENST00000621271 ANGPTL5Q86XS5 388 aa8.9□□□□□ -0.98
CLTCL1-211ENST00000621271 CARFQ8N187 725 aa8.9□□□□□ -0.98
CLTCL1-211ENST00000621271 ARIH2OSQ8N7S6 290 aa8.9□□□□□ -0.98
CLTCL1-211ENST00000621271 TP53I13Q8NBR0 393 aaPredicted RBP8.9□□□□□ -0.98
CLTCL1-211ENST00000621271 FN3KRPQ9HA64 309 aa8.9□□□□□ -0.98
CLTCL1-211ENST00000621271 FSCN3Q9NQT6 498 aa8.9□□□□□ -0.98
CLTCL1-211ENST00000621271 SERGEFQ9UGK8 458 aa8.9□□□□□ -0.98
CLTCL1-211ENST00000621271 BOLA1Q9Y3E2 137 aa8.9□□□□□ -0.98
CLTCL1-211ENST00000621271 E9PI62 339 aa8.9□□□□□ -0.99
CLTCL1-211ENST00000621271 NUPL2O15504 423 aaKnown RBP8.9□□□□□ -0.99
CLTCL1-211ENST00000621271 DHHO43323 396 aa8.9□□□□□ -0.99
CLTCL1-211ENST00000621271 ALX3O95076 343 aa8.9□□□□□ -0.99
CLTCL1-211ENST00000621271 FOLR1P15328 257 aa8.9□□□□□ -0.99
CLTCL1-211ENST00000621271 ACHEP22303 614 aa8.9□□□□□ -0.99
CLTCL1-211ENST00000621271 PRPH2P23942 346 aa8.9□□□□□ -0.99
CLTCL1-211ENST00000621271 GPR12P47775 334 aa8.9□□□□□ -0.99
CLTCL1-211ENST00000621271 ZNF83P51522 516 aa8.9□□□□□ -0.99
CLTCL1-211ENST00000621271 FOXF1Q12946 379 aa8.9□□□□□ -0.99
CLTCL1-211ENST00000621271 SHBQ15464 509 aa8.9□□□□□ -0.99
CLTCL1-211ENST00000621271 ZNF674Q2M3X9 581 aa8.9□□□□□ -0.99
CLTCL1-211ENST00000621271 SMIM21Q3B7S5 101 aa8.9□□□□□ -0.99
CLTCL1-211ENST00000621271 PRAMEF5Q5TYX0 476 aa8.9□□□□□ -0.99
CLTCL1-211ENST00000621271 PRAMEF6Q5VXH4 476 aa8.9□□□□□ -0.99
CLTCL1-211ENST00000621271 H2BFWTQ7Z2G1 175 aa8.9□□□□□ -0.99
CLTCL1-211ENST00000621271 OR1L3Q8NH93 324 aa8.9□□□□□ -0.99
CLTCL1-211ENST00000621271 LHX9Q9NQ69 397 aa8.9□□□□□ -0.99
CLTCL1-211ENST00000621271 C19orf12Q9NSK7 152 aa8.9□□□□□ -0.99
CLTCL1-211ENST00000621271 GPR55Q9Y2T6 319 aaPredicted RBP8.9□□□□□ -0.99
CLTCL1-211ENST00000621271 A6NIN4 97 aa8.9□□□□□ -0.99
CLTCL1-211ENST00000621271 F6UZH7 168 aa8.9□□□□□ -0.99
CLTCL1-211ENST00000621271 SELENOFO60613 162 aa8.9□□□□□ -0.99
CLTCL1-211ENST00000621271 GABRA5P31644 462 aa8.9□□□□□ -0.99
CLTCL1-211ENST00000621271 SLC6A12P48065 614 aa8.9□□□□□ -0.99
CLTCL1-211ENST00000621271 DLX5P56178 289 aa8.9□□□□□ -0.99
CLTCL1-211ENST00000621271 RPS16P62249 146 aaKnown RBP8.9□□□□□ -0.99
CLTCL1-211ENST00000621271 DUSP8Q13202 625 aa8.9□□□□□ -0.99
CLTCL1-211ENST00000621271 HABP2Q14520 560 aaPredicted RBP8.9□□□□□ -0.99
CLTCL1-211ENST00000621271 CPEB4Q17RY0 729 aaKnown RBP eCLIP8.9□□□□□ -0.99
CLTCL1-211ENST00000621271 ALKBH6Q3KRA9 238 aa8.9□□□□□ -0.99
CLTCL1-211ENST00000621271 GLYATL3Q5SZD4 288 aa8.9□□□□□ -0.99
CLTCL1-211ENST00000621271 SAXO2Q658L1 398 aa8.9□□□□□ -0.99
CLTCL1-211ENST00000621271 NANPQ8TBE9 248 aa8.9□□□□□ -0.99
CLTCL1-211ENST00000621271 ATF6BQ99941 703 aa8.9□□□□□ -0.99
CLTCL1-211ENST00000621271 RAB1BQ9H0U4 201 aa8.9□□□□□ -0.99
CLTCL1-211ENST00000621271 RAB22AQ9UL26 194 aa8.9□□□□□ -0.99
CLTCL1-211ENST00000621271 ZNF254O75437 659 aa8.89□□□□□ -0.99
CLTCL1-211ENST00000621271 CTXN2P0C2S0 81 aa8.89□□□□□ -0.99
CLTCL1-211ENST00000621271 OR8U8P0C7N1 319 aa8.89□□□□□ -0.99
CLTCL1-211ENST00000621271 NAGAP17050 411 aa8.89□□□□□ -0.99
CLTCL1-211ENST00000621271 ACVR1Q04771 509 aa8.89□□□□□ -0.99
CLTCL1-211ENST00000621271 PLK5Q496M5 336 aa8.89□□□□□ -0.99
CLTCL1-211ENST00000621271 FAM74A1Q5RGS3 127 aa8.89□□□□□ -0.99
CLTCL1-211ENST00000621271 STPG1Q5TH74 334 aa8.89□□□□□ -0.99
CLTCL1-211ENST00000621271 SLC36A1Q7Z2H8 476 aa8.89□□□□□ -0.99
CLTCL1-211ENST00000621271 MRPS24Q96EL2 167 aaKnown RBP8.89□□□□□ -0.99
CLTCL1-211ENST00000621271 SLC35E1Q96K37 410 aa8.89□□□□□ -0.99
CLTCL1-211ENST00000621271 GABRG3Q99928 467 aa8.89□□□□□ -0.99
CLTCL1-211ENST00000621271 C11orf54Q9H0W9 315 aaPredicted RBP8.89□□□□□ -0.99
CLTCL1-211ENST00000621271 ASF1BQ9NVP2 202 aa8.89□□□□□ -0.99
CLTCL1-211ENST00000621271 MED29Q9NX70 200 aa8.89□□□□□ -0.99
CLTCL1-211ENST00000621271 ASIC5Q9NY37 505 aa8.89□□□□□ -0.99
CLTCL1-211ENST00000621271 KNTC1P50748 2209 aa8.89□□□□□ -0.99
CLTCL1-211ENST00000621271 A0A1W2PPC1 479 aa8.89□□□□□ -0.99
CLTCL1-211ENST00000621271 PHF1O43189 567 aaPredicted RBP8.89□□□□□ -0.99
CLTCL1-211ENST00000621271 GALR2O43603 387 aaPredicted RBP8.89□□□□□ -0.99
CLTCL1-211ENST00000621271 B4GALT3O60512 393 aa8.89□□□□□ -0.99
CLTCL1-211ENST00000621271 COL9A1P20849 921 aa8.89□□□□□ -0.99
CLTCL1-211ENST00000621271 TRIM23P36406 574 aa8.89□□□□□ -0.99
CLTCL1-211ENST00000621271 BTN1A1Q13410 526 aa8.89□□□□□ -0.99
CLTCL1-211ENST00000621271 COL13A1Q5TAT6 717 aaPredicted RBP8.89□□□□□ -0.99
CLTCL1-211ENST00000621271 KDM4DQ6B0I6 523 aa8.89□□□□□ -0.99
CLTCL1-211ENST00000621271 DPPA2Q7Z7J5 298 aa8.89□□□□□ -0.99
CLTCL1-211ENST00000621271 ADGRE4PQ86SQ3 457 aa8.89□□□□□ -0.99
CLTCL1-211ENST00000621271 CATSPERDQ86XM0 798 aa8.89□□□□□ -0.99
CLTCL1-211ENST00000621271 KLHDC8BQ8IXV7 354 aa8.89□□□□□ -0.99
CLTCL1-211ENST00000621271 NT5CQ8TCD5 201 aa8.89□□□□□ -0.99
CLTCL1-211ENST00000621271 SLAMF9Q96A28 289 aa8.89□□□□□ -0.99
CLTCL1-211ENST00000621271 KCTD12Q96CX2 325 aaKnown RBP8.89□□□□□ -0.99
CLTCL1-211ENST00000621271 CNTNAP3BQ96NU0 1288 aa8.89□□□□□ -0.99
CLTCL1-211ENST00000621271 OPALINQ96PE5 141 aa8.89□□□□□ -0.99
CLTCL1-211ENST00000621271 JAM3Q9BX67 310 aa8.89□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms