RNA–Protein interactions for RNA: ENST00000618395.4

COL5A1-208, Transcript of collagen type V alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL5A1, Length 8,437 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-208ENST00000618395 KLHDC8AQ8IYD2 350 aa13.83□□□□□ -0.2
COL5A1-208ENST00000618395 IL21Q9HBE4 155 aa13.83□□□□□ -0.2
COL5A1-208ENST00000618395 DMRT1Q9Y5R6 373 aa13.83□□□□□ -0.2
COL5A1-208ENST00000618395 HMSDA8MTL9 139 aa13.83□□□□□ -0.2
COL5A1-208ENST00000618395 NRASP01111 189 aa13.83□□□□□ -0.2
COL5A1-208ENST00000618395 HRASP01112 189 aa13.83□□□□□ -0.2
COL5A1-208ENST00000618395 KRASP01116 189 aa13.83□□□□□ -0.2
COL5A1-208ENST00000618395 TREML2Q5T2D2 321 aa13.83□□□□□ -0.2
COL5A1-208ENST00000618395 CYHR1Q6ZMK1 362 aa13.83□□□□□ -0.2
COL5A1-208ENST00000618395 FAM57BQ71RH2 274 aa13.83□□□□□ -0.2
COL5A1-208ENST00000618395 EMG1Q92979 244 aaKnown RBP13.83□□□□□ -0.2
COL5A1-208ENST00000618395 LRFN3Q9BTN0 628 aa13.83□□□□□ -0.2
COL5A1-208ENST00000618395 CA12O43570 354 aa13.83□□□□□ -0.2
COL5A1-208ENST00000618395 GPR32P1Q8NGA4 272 aa13.83□□□□□ -0.2
COL5A1-208ENST00000618395 OR5D13Q8NGL4 314 aa13.83□□□□□ -0.2
COL5A1-208ENST00000618395 EDAQ92838 391 aa13.83□□□□□ -0.2
COL5A1-208ENST00000618395 CDCA4Q9BXL8 241 aa13.83□□□□□ -0.2
COL5A1-208ENST00000618395 DOK5Q9P104 306 aa13.83□□□□□ -0.2
COL5A1-208ENST00000618395 MAP1LC3B2A6NCE7 125 aa13.83□□□□□ -0.2
COL5A1-208ENST00000618395 IL5P05113 134 aa13.83□□□□□ -0.2
COL5A1-208ENST00000618395 FHITP49789 147 aa13.83□□□□□ -0.2
COL5A1-208ENST00000618395 CSNK1G2P78368 415 aa13.83□□□□□ -0.2
COL5A1-208ENST00000618395 TBPL2Q6SJ96 375 aa13.83□□□□□ -0.2
COL5A1-208ENST00000618395 DCXRQ7Z4W1 244 aa13.83□□□□□ -0.2
COL5A1-208ENST00000618395 SYT9Q86SS6 491 aa13.83□□□□□ -0.2
COL5A1-208ENST00000618395 SERINC5Q86VE9 423 aa13.83□□□□□ -0.2
COL5A1-208ENST00000618395 CBLN2Q8IUK8 224 aa13.83□□□□□ -0.2
COL5A1-208ENST00000618395 ARL14EPQ8N8R7 260 aaPredicted RBP13.83□□□□□ -0.2
COL5A1-208ENST00000618395 MAP1LC3BQ9GZQ8 125 aa13.83□□□□□ -0.2
COL5A1-208ENST00000618395 Q9N2K0 584 aa13.83□□□□□ -0.2
COL5A1-208ENST00000618395 NID2Q14112 1375 aa13.83□□□□□ -0.2
COL5A1-208ENST00000618395 NSG1A0A0A6YYJ2 146 aa13.82□□□□□ -0.2
COL5A1-208ENST00000618395 GYPAP02724 150 aa13.82□□□□□ -0.2
COL5A1-208ENST00000618395 UBE2V2Q15819 145 aa13.82□□□□□ -0.2
COL5A1-208ENST00000618395 AWAT1Q58HT5 328 aa13.82□□□□□ -0.2
COL5A1-208ENST00000618395 USP50Q70EL3 339 aaPredicted RBP13.82□□□□□ -0.2
COL5A1-208ENST00000618395 ADAT3Q96EY9 351 aaPredicted RBP13.82□□□□□ -0.2
COL5A1-208ENST00000618395 ATP5SQ99766 215 aa13.82□□□□□ -0.2
COL5A1-208ENST00000618395 FAM87AP0C7U9 286 aa13.82□□□□□ -0.2
COL5A1-208ENST00000618395 SEC13P55735 322 aa13.82□□□□□ -0.2
COL5A1-208ENST00000618395 BPIFB3P59826 476 aa13.82□□□□□ -0.2
COL5A1-208ENST00000618395 TEAD2Q15562 447 aa13.82□□□□□ -0.2
COL5A1-208ENST00000618395 ZNF385CQ66K41 422 aaPredicted RBP13.82□□□□□ -0.2
COL5A1-208ENST00000618395 BCO2Q9BYV7 579 aa13.82□□□□□ -0.2
COL5A1-208ENST00000618395 ZNF593O00488 134 aaPredicted RBP13.82□□□□□ -0.2
COL5A1-208ENST00000618395 GPR37O15354 613 aa13.82□□□□□ -0.2
COL5A1-208ENST00000618395 IGHG1P01857 330 aa13.82□□□□□ -0.2
COL5A1-208ENST00000618395 SULT1A1P50225 295 aa13.82□□□□□ -0.2
COL5A1-208ENST00000618395 PGGT1BP53609 377 aa13.82□□□□□ -0.2
COL5A1-208ENST00000618395 UBE2MP61081 183 aaKnown RBP13.82□□□□□ -0.2
COL5A1-208ENST00000618395 PPP2CBP62714 309 aa13.82□□□□□ -0.2
COL5A1-208ENST00000618395 PAX5Q02548 391 aa13.82□□□□□ -0.2
COL5A1-208ENST00000618395 VGLL4Q14135 290 aa13.82□□□□□ -0.2
COL5A1-208ENST00000618395 MANEAQ5SRI9 462 aa13.82□□□□□ -0.2
COL5A1-208ENST00000618395 HERPUD2Q9BSE4 406 aa13.82□□□□□ -0.2
COL5A1-208ENST00000618395 ABLIM3O94929 683 aa13.82□□□□□ -0.2
COL5A1-208ENST00000618395 CST4P01036 141 aa13.82□□□□□ -0.2
COL5A1-208ENST00000618395 SDC1P18827 310 aa13.82□□□□□ -0.2
COL5A1-208ENST00000618395 FOXA1P55317 472 aa13.82□□□□□ -0.2
COL5A1-208ENST00000618395 CYB5R2Q6BCY4 276 aa13.82□□□□□ -0.2
COL5A1-208ENST00000618395 DDA1Q9BW61 102 aa13.82□□□□□ -0.2
COL5A1-208ENST00000618395 ACPTQ9BZG2 426 aa13.82□□□□□ -0.2
COL5A1-208ENST00000618395 WDR61Q9GZS3 305 aaKnown RBP13.82□□□□□ -0.2
COL5A1-208ENST00000618395 FRS3O43559 492 aa13.82□□□□□ -0.2
COL5A1-208ENST00000618395 CDC34P49427 236 aaPredicted RBP13.82□□□□□ -0.2
COL5A1-208ENST00000618395 AESQ08117 197 aa13.82□□□□□ -0.2
COL5A1-208ENST00000618395 SRPK3Q9UPE1 567 aa13.82□□□□□ -0.2
COL5A1-208ENST00000618395 FZD6O60353 706 aa13.82□□□□□ -0.2
COL5A1-208ENST00000618395 GCGP01275 180 aa13.82□□□□□ -0.2
COL5A1-208ENST00000618395 CD79AP11912 226 aa13.82□□□□□ -0.2
COL5A1-208ENST00000618395 ARRB1P49407 418 aaPredicted RBP13.82□□□□□ -0.2
COL5A1-208ENST00000618395 DPH7Q9BTV6 452 aa13.82□□□□□ -0.2
COL5A1-208ENST00000618395 CTSFQ9UBX1 484 aa13.82□□□□□ -0.2
COL5A1-208ENST00000618395 LPAR3Q9UBY5 353 aa13.82□□□□□ -0.2
COL5A1-208ENST00000618395 FAM186AA6NE01 2351 aa13.82□□□□□ -0.2
COL5A1-208ENST00000618395 CCL23P55773 120 aa13.82□□□□□ -0.2
COL5A1-208ENST00000618395 WBP2NLQ6ICG8 309 aa13.82□□□□□ -0.2
COL5A1-208ENST00000618395 MOB3CQ70IA8 216 aa13.82□□□□□ -0.2
COL5A1-208ENST00000618395 NUDCD2Q8WVJ2 157 aa13.82□□□□□ -0.2
COL5A1-208ENST00000618395 CNN1P51911 297 aaKnown RBP13.81□□□□□ -0.2
COL5A1-208ENST00000618395 SRSF9Q13242 221 aaKnown RBP eCLIP13.81□□□□□ -0.2
COL5A1-208ENST00000618395 VGLL2Q8N8G2 317 aa13.81□□□□□ -0.2
COL5A1-208ENST00000618395 CYB5D2Q8WUJ1 264 aa13.81□□□□□ -0.2
COL5A1-208ENST00000618395 SLC35E1Q96K37 410 aa13.81□□□□□ -0.2
COL5A1-208ENST00000618395 ZNF426Q9BUY5 554 aa13.81□□□□□ -0.2
COL5A1-208ENST00000618395 TGIF2-C20orf24A0A0A6YYL0 155 aa13.81□□□□□ -0.2
COL5A1-208ENST00000618395 CEBPBP17676 345 aa13.81□□□□□ -0.2
COL5A1-208ENST00000618395 POU3F3P20264 500 aaPredicted RBP13.81□□□□□ -0.2
COL5A1-208ENST00000618395 GNG4P50150 75 aa13.81□□□□□ -0.2
COL5A1-208ENST00000618395 SERTAD2Q14140 314 aa13.81□□□□□ -0.2
COL5A1-208ENST00000618395 ANGPTL5Q86XS5 388 aa13.81□□□□□ -0.2
COL5A1-208ENST00000618395 APCDD1Q8J025 514 aa13.81□□□□□ -0.2
COL5A1-208ENST00000618395 FBXO22Q8NEZ5 403 aa13.81□□□□□ -0.2
COL5A1-208ENST00000618395 FAM234AQ9H0X4 552 aa13.81□□□□□ -0.2
COL5A1-208ENST00000618395 KIF13BQ9NQT8 1826 aa13.81□□□□□ -0.2
COL5A1-208ENST00000618395 ABHD16AO95870 558 aa13.81□□□□□ -0.2
COL5A1-208ENST00000618395 ARG1P05089 322 aa13.81□□□□□ -0.2
COL5A1-208ENST00000618395 ISL1P61371 349 aa13.81□□□□□ -0.2
COL5A1-208ENST00000618395 SNRPNP63162 240 aaKnown RBP13.81□□□□□ -0.2
COL5A1-208ENST00000618395 TGFBR3Q03167 851 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms