RNA–Protein interactions for RNA: ENST00000617246.4

LPP-220, Transcript of LIM domain containing preferred translocation partner in lipoma, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LPP, Length 18,220 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPP-220ENST00000617246 GK2Q14410 553 aaPredicted RBP3.02□□□□□ -1.93
LPP-220ENST00000617246 COL19A1Q14993 1142 aa3.02□□□□□ -1.93
LPP-220ENST00000617246 DDI2Q5TDH0 399 aa3.02□□□□□ -1.93
LPP-220ENST00000617246 RANBP10Q6VN20 620 aa3.02□□□□□ -1.93
LPP-220ENST00000617246 INSM2Q96T92 566 aaPredicted RBP3.02□□□□□ -1.93
LPP-220ENST00000617246 NME2P1O60361 137 aa3.02□□□□□ -1.93
LPP-220ENST00000617246 NME2P22392 152 aa3.02□□□□□ -1.93
LPP-220ENST00000617246 TAS2R45P59539 299 aa3.02□□□□□ -1.93
LPP-220ENST00000617246 GGNBP1Q5YKI7 109 aa3.02□□□□□ -1.93
LPP-220ENST00000617246 FCAMRQ8WWV6 532 aa3.02□□□□□ -1.93
LPP-220ENST00000617246 FOXB1Q99853 325 aa3.02□□□□□ -1.93
LPP-220ENST00000617246 HAPLN2Q9GZV7 340 aa3.02□□□□□ -1.93
LPP-220ENST00000617246 ISYNA1Q9NPH2 558 aa3.02□□□□□ -1.93
LPP-220ENST00000617246 TRAPPC13A5PLN9 417 aa3.02□□□□□ -1.93
LPP-220ENST00000617246 CEBPZOSA8MTT3 80 aa3.02□□□□□ -1.93
LPP-220ENST00000617246 H0Y980 276 aa3.02□□□□□ -1.93
LPP-220ENST00000617246 FBXO24O75426 580 aa3.02□□□□□ -1.93
LPP-220ENST00000617246 EML2O95834 649 aa3.02□□□□□ -1.93
LPP-220ENST00000617246 GNAO1P09471 354 aa3.02□□□□□ -1.93
LPP-220ENST00000617246 WNT7BP56706 349 aa3.02□□□□□ -1.93
LPP-220ENST00000617246 TAS2R31P59538 309 aa3.02□□□□□ -1.93
LPP-220ENST00000617246 DGUOKQ16854 277 aa3.02□□□□□ -1.93
LPP-220ENST00000617246 CLEC12AQ5QGZ9 265 aa3.02□□□□□ -1.93
LPP-220ENST00000617246 ASRGL1Q7L266 308 aa3.02□□□□□ -1.93
LPP-220ENST00000617246 NOXO1Q8NFA2 376 aa3.02□□□□□ -1.93
LPP-220ENST00000617246 MMP27Q9H306 513 aa3.02□□□□□ -1.93
LPP-220ENST00000617246 TPK1Q9H3S4 243 aa3.02□□□□□ -1.93
LPP-220ENST00000617246 C7orf69Q9H7B7 122 aa3.02□□□□□ -1.93
LPP-220ENST00000617246 ADAMTS6Q9UKP5 1117 aa3.02□□□□□ -1.93
LPP-220ENST00000617246 KIR2DS1A0A191URI9 304 aa3.02□□□□□ -1.93
LPP-220ENST00000617246 C5orf49A4QMS7 147 aa3.02□□□□□ -1.93
LPP-220ENST00000617246 UBOX5O94941 541 aa3.02□□□□□ -1.93
LPP-220ENST00000617246 SDC1P18827 310 aa3.02□□□□□ -1.93
LPP-220ENST00000617246 IVDP26440 423 aa3.02□□□□□ -1.93
LPP-220ENST00000617246 KIR2DS4P43632 304 aa3.02□□□□□ -1.93
LPP-220ENST00000617246 DUSP2Q05923 314 aa3.02□□□□□ -1.93
LPP-220ENST00000617246 KIR2DS1Q14954 304 aa3.02□□□□□ -1.93
LPP-220ENST00000617246 ACTBL2Q562R1 376 aa3.02□□□□□ -1.93
LPP-220ENST00000617246 RUNDC3AQ59EK9 446 aa3.02□□□□□ -1.93
LPP-220ENST00000617246 KRBOX4Q5JUW0 171 aa3.02□□□□□ -1.93
LPP-220ENST00000617246 ZNF626Q68DY1 528 aa3.02□□□□□ -1.93
LPP-220ENST00000617246 Q6ZPB1 254 aaPredicted RBP3.02□□□□□ -1.93
LPP-220ENST00000617246 DNASE2BQ8WZ79 361 aa3.02□□□□□ -1.93
LPP-220ENST00000617246 IGHV1-69-2A0A0G2JMI3 117 aa3.02□□□□□ -1.93
LPP-220ENST00000617246 LCMT2O60294 686 aaKnown RBP3.02□□□□□ -1.93
LPP-220ENST00000617246 SERPINE2P07093 398 aa3.02□□□□□ -1.93
LPP-220ENST00000617246 TAGLNQ01995 201 aaKnown RBP3.02□□□□□ -1.93
LPP-220ENST00000617246 ZNF616Q08AN1 781 aa3.02□□□□□ -1.93
LPP-220ENST00000617246 PRAMEF9Q5VWM5 478 aa3.02□□□□□ -1.93
LPP-220ENST00000617246 ACOT11Q8WXI4 607 aaPredicted RBP3.02□□□□□ -1.93
LPP-220ENST00000617246 ERGIC1Q969X5 290 aa3.02□□□□□ -1.93
LPP-220ENST00000617246 C8orf44Q96CB5 159 aa3.02□□□□□ -1.93
LPP-220ENST00000617246 ZBTB10Q96DT7 871 aa3.02□□□□□ -1.93
LPP-220ENST00000617246 PRRC2BQ5JSZ5 2229 aaKnown RBP3.02□□□□□ -1.93
LPP-220ENST00000617246 H3BSH0 61 aa3.02□□□□□ -1.93
LPP-220ENST00000617246 LHBP01229 141 aa3.02□□□□□ -1.93
LPP-220ENST00000617246 HIST1H1BP16401 226 aaKnown RBP3.02□□□□□ -1.93
LPP-220ENST00000617246 AQP5P55064 265 aa3.02□□□□□ -1.93
LPP-220ENST00000617246 TAS2R30P59541 319 aa3.02□□□□□ -1.93
LPP-220ENST00000617246 HSD17B12Q53GQ0 312 aa3.02□□□□□ -1.93
LPP-220ENST00000617246 C9orf66Q5T8R8 295 aa3.02□□□□□ -1.93
LPP-220ENST00000617246 GPRIN1Q7Z2K8 1008 aa3.02□□□□□ -1.93
LPP-220ENST00000617246 CA13Q8N1Q1 262 aa3.02□□□□□ -1.93
LPP-220ENST00000617246 NEIL3Q8TAT5 605 aa3.02□□□□□ -1.93
LPP-220ENST00000617246 GTF3AQ92664 365 aaKnown RBP3.02□□□□□ -1.93
LPP-220ENST00000617246 FBXO7Q9Y3I1 522 aa3.02□□□□□ -1.93
LPP-220ENST00000617246 ARHGEF15O94989 841 aa3.02□□□□□ -1.93
LPP-220ENST00000617246 GFERP55789 205 aa3.02□□□□□ -1.93
LPP-220ENST00000617246 ZNF239Q16600 458 aaKnown RBP3.02□□□□□ -1.93
LPP-220ENST00000617246 ECSCRQ19T08 205 aa3.02□□□□□ -1.93
LPP-220ENST00000617246 OR5D18Q8NGL1 313 aa3.02□□□□□ -1.93
LPP-220ENST00000617246 GLYATL2Q8WU03 294 aa3.02□□□□□ -1.93
LPP-220ENST00000617246 LIPHQ8WWY8 451 aa3.02□□□□□ -1.93
LPP-220ENST00000617246 KTI12Q96EK9 354 aaPredicted RBP3.02□□□□□ -1.93
LPP-220ENST00000617246 APOBEC3GQ9HC16 384 aaKnown RBP3.02□□□□□ -1.93
LPP-220ENST00000617246 TAGLN3Q9UI15 199 aa3.02□□□□□ -1.93
LPP-220ENST00000617246 TOX4O94842 621 aa3.02□□□□□ -1.93
LPP-220ENST00000617246 C1orf105O95561 183 aa3.02□□□□□ -1.93
LPP-220ENST00000617246 CHRM2P08172 466 aa3.02□□□□□ -1.93
LPP-220ENST00000617246 THRBP10828 461 aa3.02□□□□□ -1.93
LPP-220ENST00000617246 AADACP22760 399 aa3.02□□□□□ -1.93
LPP-220ENST00000617246 SNRPD3P62318 126 aaKnown RBP3.02□□□□□ -1.93
LPP-220ENST00000617246 TAS1R1Q7RTX1 841 aa3.02□□□□□ -1.93
LPP-220ENST00000617246 OR8H2Q8N162 312 aa3.02□□□□□ -1.93
LPP-220ENST00000617246 DNAJC22Q8N4W6 341 aa3.02□□□□□ -1.93
LPP-220ENST00000617246 AMER2Q8N7J2 671 aa3.02□□□□□ -1.93
LPP-220ENST00000617246 PLA2G2FQ9BZM2 168 aa3.02□□□□□ -1.93
LPP-220ENST00000617246 GOLT1BQ9Y3E0 138 aa3.02□□□□□ -1.93
LPP-220ENST00000617246 COL4A5P29400 1685 aa3.02□□□□□ -1.93
LPP-220ENST00000617246 MEGF11A6BM72 1044 aa3.02□□□□□ -1.93
LPP-220ENST00000617246 LYZL6O75951 148 aa3.02□□□□□ -1.93
LPP-220ENST00000617246 FAM157BP0CG42 384 aa3.02□□□□□ -1.93
LPP-220ENST00000617246 MDH1P40925 334 aaKnown RBP3.02□□□□□ -1.93
LPP-220ENST00000617246 GPR50Q13585 617 aa3.02□□□□□ -1.93
LPP-220ENST00000617246 WSCD2Q2TBF2 565 aa3.02□□□□□ -1.93
LPP-220ENST00000617246 FBXW12Q6X9E4 464 aa3.02□□□□□ -1.93
LPP-220ENST00000617246 OR5AS1Q8N127 324 aa3.02□□□□□ -1.93
LPP-220ENST00000617246 C15orf53Q8NAA6 179 aa3.02□□□□□ -1.93
LPP-220ENST00000617246 CHRDL1Q9BU40 450 aa3.02□□□□□ -1.93
LPP-220ENST00000617246 KIF25Q9UIL4 384 aa3.02□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms