RNA–Protein interactions for RNA: ENST00000616154.1

CDX1-202, Transcript of caudal type homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene CDX1, Length 1,343 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDX1-202ENST00000616154 TXNDC12O95881 172 aa16.13■□□□□ 0.17
CDX1-202ENST00000616154 CST2P09228 141 aa16.13■□□□□ 0.17
CDX1-202ENST00000616154 ERVK-25P63136 954 aa16.13■□□□□ 0.17
CDX1-202ENST00000616154 MOGQ16653 247 aa16.13■□□□□ 0.17
CDX1-202ENST00000616154 MESTQ5EB52 335 aa16.13■□□□□ 0.17
CDX1-202ENST00000616154 GPR139Q6DWJ6 353 aa16.13■□□□□ 0.17
CDX1-202ENST00000616154 TMEM179BQ7Z7N9 219 aa16.13■□□□□ 0.17
CDX1-202ENST00000616154 AMIGO2Q86SJ2 522 aa16.13■□□□□ 0.17
CDX1-202ENST00000616154 CPEB3Q8NE35 698 aaKnown RBP16.13■□□□□ 0.17
CDX1-202ENST00000616154 GPA33Q99795 319 aa16.13■□□□□ 0.17
CDX1-202ENST00000616154 KRCC1Q9NPI7 259 aaPredicted RBP16.13■□□□□ 0.17
CDX1-202ENST00000616154 GRHPRQ9UBQ7 328 aa16.13■□□□□ 0.17
CDX1-202ENST00000616154 NKX1-2Q9UD57 310 aaPredicted RBP16.13■□□□□ 0.17
CDX1-202ENST00000616154 SAMHD1Q9Y3Z3 626 aaKnown RBP16.13■□□□□ 0.17
CDX1-202ENST00000616154 TANC2Q9HCD6 1990 aa16.12■□□□□ 0.17
CDX1-202ENST00000616154 IGHV1-69-2A0A0G2JMI3 117 aa16.12■□□□□ 0.17
CDX1-202ENST00000616154 PRSS37A4D1T9 235 aa16.12■□□□□ 0.17
CDX1-202ENST00000616154 ARRDC5A6NEK1 342 aa16.12■□□□□ 0.17
CDX1-202ENST00000616154 TNFRSF11BO00300 401 aa16.12■□□□□ 0.17
CDX1-202ENST00000616154 CASQ2O14958 399 aaPredicted RBP16.12■□□□□ 0.17
CDX1-202ENST00000616154 ATP6V1G2O95670 118 aa16.12■□□□□ 0.17
CDX1-202ENST00000616154 IGHV3-13P01766 116 aa16.12■□□□□ 0.17
CDX1-202ENST00000616154 MT-ND5P03915 603 aa16.12■□□□□ 0.17
CDX1-202ENST00000616154 ZNF32P17041 273 aa16.12■□□□□ 0.17
CDX1-202ENST00000616154 SDHAP31040 664 aa16.12■□□□□ 0.17
CDX1-202ENST00000616154 APLNRP35414 380 aa16.12■□□□□ 0.17
CDX1-202ENST00000616154 MVKQ03426 396 aa16.12■□□□□ 0.17
CDX1-202ENST00000616154 HSF2Q03933 536 aa16.12■□□□□ 0.17
CDX1-202ENST00000616154 PABPC1L2AQ5JQF8 200 aa16.12■□□□□ 0.17
CDX1-202ENST00000616154 AVPI1Q5T686 147 aa16.12■□□□□ 0.17
CDX1-202ENST00000616154 ZNF770Q6IQ21 691 aaPredicted RBP16.12■□□□□ 0.17
CDX1-202ENST00000616154 ACSM5Q6NUN0 579 aa16.12■□□□□ 0.17
CDX1-202ENST00000616154 FAHD2BQ6P2I3 314 aaPredicted RBP16.12■□□□□ 0.17
CDX1-202ENST00000616154 THSD4Q6ZMP0 1018 aa16.12■□□□□ 0.17
CDX1-202ENST00000616154 ZER1Q7Z7L7 766 aa16.12■□□□□ 0.17
CDX1-202ENST00000616154 SYT9Q86SS6 491 aa16.12■□□□□ 0.17
CDX1-202ENST00000616154 LRRC18Q8N456 261 aa16.12■□□□□ 0.17
CDX1-202ENST00000616154 ICA1LQ8NDH6 482 aa16.12■□□□□ 0.17
CDX1-202ENST00000616154 ZNF418Q8TF45 676 aaPredicted RBP16.12■□□□□ 0.17
CDX1-202ENST00000616154 NSMAFQ92636 917 aa16.12■□□□□ 0.17
CDX1-202ENST00000616154 RAB39BQ96DA2 213 aa16.12■□□□□ 0.17
CDX1-202ENST00000616154 FAHD2AQ96GK7 314 aa16.12■□□□□ 0.17
CDX1-202ENST00000616154 POM121L2Q96KW2 1035 aa16.12■□□□□ 0.17
CDX1-202ENST00000616154 Q96M85 177 aa16.12■□□□□ 0.17
CDX1-202ENST00000616154 KCNN2Q9H2S1 579 aa16.12■□□□□ 0.17
CDX1-202ENST00000616154 CFPP27918 469 aa16.11■□□□□ 0.17
CDX1-202ENST00000616154 RPL4P36578 427 aaKnown RBP16.11■□□□□ 0.17
CDX1-202ENST00000616154 ENDOGQ14249 297 aaKnown RBP16.11■□□□□ 0.17
CDX1-202ENST00000616154 DPY19L2P2Q6ZN68 376 aa16.11■□□□□ 0.17
CDX1-202ENST00000616154 C1orf229Q6ZS94 237 aaPredicted RBP16.11■□□□□ 0.17
CDX1-202ENST00000616154 USP51Q70EK9 711 aa16.11■□□□□ 0.17
CDX1-202ENST00000616154 ADCK1Q86TW2 530 aa16.11■□□□□ 0.17
CDX1-202ENST00000616154 OR1J1Q8NGS3 322 aa16.11■□□□□ 0.17
CDX1-202ENST00000616154 OR5K1Q8NHB7 308 aa16.11■□□□□ 0.17
CDX1-202ENST00000616154 GTF3AQ92664 365 aaKnown RBP16.11■□□□□ 0.17
CDX1-202ENST00000616154 ZNF570Q96NI8 536 aa16.11■□□□□ 0.17
CDX1-202ENST00000616154 CCNB1IP1Q9NPC3 277 aa16.11■□□□□ 0.17
CDX1-202ENST00000616154 POLE4Q9NR33 117 aa16.11■□□□□ 0.17
CDX1-202ENST00000616154 DECR2Q9NUI1 292 aa16.11■□□□□ 0.17
CDX1-202ENST00000616154 VSX1Q9NZR4 365 aaPredicted RBP16.11■□□□□ 0.17
CDX1-202ENST00000616154 TEX13CA0A0J9YWL9 993 aa16.1■□□□□ 0.17
CDX1-202ENST00000616154 CLDN25C9JDP6 229 aa16.1■□□□□ 0.17
CDX1-202ENST00000616154 XKRYO14609 159 aa16.1■□□□□ 0.17
CDX1-202ENST00000616154 GNGT2O14610 69 aa16.1■□□□□ 0.17
CDX1-202ENST00000616154 MPZL1O95297 269 aa16.1■□□□□ 0.17
CDX1-202ENST00000616154 EPHA1P21709 976 aa16.1■□□□□ 0.17
CDX1-202ENST00000616154 MSR1P21757 451 aa16.1■□□□□ 0.17
CDX1-202ENST00000616154 FPR3P25089 353 aa16.1■□□□□ 0.17
CDX1-202ENST00000616154 STOMP27105 288 aa16.1■□□□□ 0.17
CDX1-202ENST00000616154 LAP3P28838 519 aa16.1■□□□□ 0.17
CDX1-202ENST00000616154 PCBD1P61457 104 aa16.1■□□□□ 0.17
CDX1-202ENST00000616154 PSG4Q00888 419 aa16.1■□□□□ 0.17
CDX1-202ENST00000616154 GLO1Q04760 184 aa16.1■□□□□ 0.17
CDX1-202ENST00000616154 SLC34A1Q06495 639 aa16.1■□□□□ 0.17
CDX1-202ENST00000616154 KRR1Q13601 381 aaKnown RBP16.1■□□□□ 0.17
CDX1-202ENST00000616154 SGCAQ16586 387 aa16.1■□□□□ 0.17
CDX1-202ENST00000616154 MICAQ29983 383 aa16.1■□□□□ 0.17
CDX1-202ENST00000616154 FAM209AQ5JX71 171 aa16.1■□□□□ 0.17
CDX1-202ENST00000616154 USP43Q70EL4 1123 aa16.1■□□□□ 0.17
CDX1-202ENST00000616154 LINC00471Q8N535 108 aa16.1■□□□□ 0.17
CDX1-202ENST00000616154 OR52J3Q8NH60 311 aa16.1■□□□□ 0.17
CDX1-202ENST00000616154 OR2H1Q9GZK4 316 aa16.1■□□□□ 0.17
CDX1-202ENST00000616154 GABARAPL1Q9H0R8 117 aa16.1■□□□□ 0.17
CDX1-202ENST00000616154 WNT5BQ9H1J7 359 aa16.1■□□□□ 0.17
CDX1-202ENST00000616154 SAP30LQ9HAJ7 183 aa16.1■□□□□ 0.17
CDX1-202ENST00000616154 PCDHB10Q9UN67 800 aa16.1■□□□□ 0.17
CDX1-202ENST00000616154 WIPI2Q9Y4P8 454 aa16.1■□□□□ 0.17
CDX1-202ENST00000616154 U3KQV3 271 aa16.1■□□□□ 0.17
CDX1-202ENST00000616154 LOC100509620A0A075B734 347 aa16.09■□□□□ 0.17
CDX1-202ENST00000616154 LOC105371242A0A075B767 164 aa16.09■□□□□ 0.17
CDX1-202ENST00000616154 A0A0G2JMP0 313 aa16.09■□□□□ 0.17
CDX1-202ENST00000616154 A0A0X1KG70 313 aa16.09■□□□□ 0.17
CDX1-202ENST00000616154 UNC119BA6NIH7 251 aa16.09■□□□□ 0.17
CDX1-202ENST00000616154 H7C1C5 153 aa16.09■□□□□ 0.17
CDX1-202ENST00000616154 TPD52L2O43399 206 aaKnown RBP16.09■□□□□ 0.17
CDX1-202ENST00000616154 PLPP2O43688 288 aa16.09■□□□□ 0.17
CDX1-202ENST00000616154 BAG2O95816 211 aa16.09■□□□□ 0.17
CDX1-202ENST00000616154 AVPP01185 164 aa16.09■□□□□ 0.17
CDX1-202ENST00000616154 IGHV2-5P01817 119 aa16.09■□□□□ 0.17
CDX1-202ENST00000616154 CTLA4P16410 223 aa16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms