RNA–Protein interactions for RNA: ENST00000614678.1

CPNE3-208, Transcript of copine 3, humanhuman

TSL 1 (best)

Gene CPNE3, Length 4,201 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-208ENST00000614678 OR10H5Q8NGA6 315 aa4.86□□□□□ -1.63
CPNE3-208ENST00000614678 OR6K6Q8NGW6 343 aa4.86□□□□□ -1.63
CPNE3-208ENST00000614678 GIPC3Q8TF64 312 aa4.86□□□□□ -1.63
CPNE3-208ENST00000614678 PKP2Q99959 881 aa4.86□□□□□ -1.63
CPNE3-208ENST00000614678 TRIM15Q9C019 465 aa4.86□□□□□ -1.63
CPNE3-208ENST00000614678 CCNB1IP1Q9NPC3 277 aa4.86□□□□□ -1.63
CPNE3-208ENST00000614678 HINT3Q9NQE9 182 aaKnown RBP4.86□□□□□ -1.63
CPNE3-208ENST00000614678 NDE1Q9NXR1 346 aa4.86□□□□□ -1.63
CPNE3-208ENST00000614678 COMMD3-BMI1R4GMX3 469 aa4.86□□□□□ -1.63
CPNE3-208ENST00000614678 SGCEO43556 437 aa4.86□□□□□ -1.63
CPNE3-208ENST00000614678 E2F6O75461 281 aa4.86□□□□□ -1.63
CPNE3-208ENST00000614678 FARS2O95363 451 aaKnown RBP4.86□□□□□ -1.63
CPNE3-208ENST00000614678 NAA10P41227 235 aaPredicted RBP4.86□□□□□ -1.63
CPNE3-208ENST00000614678 MMP15P51511 669 aa4.86□□□□□ -1.63
CPNE3-208ENST00000614678 TEKQ02763 1124 aa4.86□□□□□ -1.63
CPNE3-208ENST00000614678 GINS1Q14691 196 aa4.86□□□□□ -1.63
CPNE3-208ENST00000614678 OR2T2Q6IF00 324 aa4.86□□□□□ -1.63
CPNE3-208ENST00000614678 SLC18B1Q6NT16 456 aa4.86□□□□□ -1.63
CPNE3-208ENST00000614678 ZNF544Q6NX49 715 aa4.86□□□□□ -1.63
CPNE3-208ENST00000614678 SHFQ7M4L6 423 aa4.86□□□□□ -1.63
CPNE3-208ENST00000614678 JAZF1Q86VZ6 243 aa4.86□□□□□ -1.63
CPNE3-208ENST00000614678 EGFL6Q8IUX8 553 aa4.86□□□□□ -1.63
CPNE3-208ENST00000614678 GLB1L2Q8IW92 636 aa4.86□□□□□ -1.63
CPNE3-208ENST00000614678 C10orf105Q8TEF2 133 aa4.86□□□□□ -1.63
CPNE3-208ENST00000614678 C4orf45Q96LM5 186 aa4.86□□□□□ -1.63
CPNE3-208ENST00000614678 ALG12Q9BV10 488 aa4.86□□□□□ -1.63
CPNE3-208ENST00000614678 LRMDAQ9H2I8 198 aa4.86□□□□□ -1.63
CPNE3-208ENST00000614678 PTTG3PQ9NZH4 202 aa4.86□□□□□ -1.63
CPNE3-208ENST00000614678 MGAT4BQ9UQ53 548 aa4.86□□□□□ -1.63
CPNE3-208ENST00000614678 TMEM5Q9Y2B1 443 aa4.86□□□□□ -1.63
CPNE3-208ENST00000614678 A0A1W2PPW3 197 aa4.85□□□□□ -1.63
CPNE3-208ENST00000614678 H7C417 338 aa4.85□□□□□ -1.63
CPNE3-208ENST00000614678 PRKYO43930 277 aa4.85□□□□□ -1.63
CPNE3-208ENST00000614678 RGS9O75916 674 aaPredicted RBP4.85□□□□□ -1.63
CPNE3-208ENST00000614678 F12P00748 615 aaPredicted RBP4.85□□□□□ -1.63
CPNE3-208ENST00000614678 TFF1P04155 84 aa4.85□□□□□ -1.63
CPNE3-208ENST00000614678 DAOP14920 347 aa4.85□□□□□ -1.63
CPNE3-208ENST00000614678 SPI1P17947 270 aa4.85□□□□□ -1.63
CPNE3-208ENST00000614678 SLC6A6P31641 620 aa4.85□□□□□ -1.63
CPNE3-208ENST00000614678 GLRXP35754 106 aa4.85□□□□□ -1.63
CPNE3-208ENST00000614678 PRKXP51817 358 aa4.85□□□□□ -1.63
CPNE3-208ENST00000614678 POU4F2Q12837 409 aa4.85□□□□□ -1.63
CPNE3-208ENST00000614678 TRAP1Q12931 704 aaKnown RBP4.85□□□□□ -1.63
CPNE3-208ENST00000614678 RASSF6Q6ZTQ3 369 aa4.85□□□□□ -1.63
CPNE3-208ENST00000614678 DPY19L4Q7Z388 723 aa4.85□□□□□ -1.63
CPNE3-208ENST00000614678 PROKR2Q8NFJ6 384 aa4.85□□□□□ -1.63
CPNE3-208ENST00000614678 ZNF420Q8TAQ5 688 aaPredicted RBP4.85□□□□□ -1.63
CPNE3-208ENST00000614678 CIB1Q99828 191 aa4.85□□□□□ -1.63
CPNE3-208ENST00000614678 MAGIXQ9H6Y5 334 aa4.85□□□□□ -1.63
CPNE3-208ENST00000614678 CDH20Q9HBT6 801 aa4.85□□□□□ -1.63
CPNE3-208ENST00000614678 DYNLRB1Q9NP97 96 aa4.85□□□□□ -1.63
CPNE3-208ENST00000614678 OBP2BQ9NPH6 170 aa4.85□□□□□ -1.63
CPNE3-208ENST00000614678 TMEFF2Q9UIK5 374 aaPredicted RBP4.85□□□□□ -1.63
CPNE3-208ENST00000614678 OAZ3Q9UMX2 235 aa4.85□□□□□ -1.63
CPNE3-208ENST00000614678 CMAHPQ9Y471 501 aa4.85□□□□□ -1.63
CPNE3-208ENST00000614678 NPIPB13A6NJU9 1138 aa4.85□□□□□ -1.63
CPNE3-208ENST00000614678 AQP12BA6NM10 295 aa4.85□□□□□ -1.63
CPNE3-208ENST00000614678 NPIPB4C9JG80 1138 aa4.85□□□□□ -1.63
CPNE3-208ENST00000614678 KRT36O76013 467 aa4.85□□□□□ -1.63
CPNE3-208ENST00000614678 CST2P09228 141 aa4.85□□□□□ -1.63
CPNE3-208ENST00000614678 PAX1P15863 534 aa4.85□□□□□ -1.63
CPNE3-208ENST00000614678 RPS6KA3P51812 740 aa4.85□□□□□ -1.63
CPNE3-208ENST00000614678 ZIK1Q3SY52 487 aaPredicted RBP4.85□□□□□ -1.63
CPNE3-208ENST00000614678 DNAL1Q4LDG9 190 aa4.85□□□□□ -1.63
CPNE3-208ENST00000614678 SHEQ5VZ18 495 aa4.85□□□□□ -1.63
CPNE3-208ENST00000614678 RGS7BPQ6MZT1 257 aaPredicted RBP4.85□□□□□ -1.63
CPNE3-208ENST00000614678 DCXRQ7Z4W1 244 aa4.85□□□□□ -1.63
CPNE3-208ENST00000614678 ZBTB46Q86UZ6 589 aa4.85□□□□□ -1.63
CPNE3-208ENST00000614678 CPOQ8IVL8 374 aa4.85□□□□□ -1.63
CPNE3-208ENST00000614678 AQP12AQ8IXF9 295 aa4.85□□□□□ -1.63
CPNE3-208ENST00000614678 LRRC75A-AS1Q8N1F1 130 aa4.85□□□□□ -1.63
CPNE3-208ENST00000614678 FAM168AQ92567 244 aa4.85□□□□□ -1.63
CPNE3-208ENST00000614678 SEH1LQ96EE3 360 aa4.85□□□□□ -1.63
CPNE3-208ENST00000614678 TRMT61AQ96FX7 289 aaKnown RBP4.85□□□□□ -1.63
CPNE3-208ENST00000614678 IL4I1Q96RQ9 567 aa4.85□□□□□ -1.63
CPNE3-208ENST00000614678 CHODLQ9H9P2 273 aa4.85□□□□□ -1.63
CPNE3-208ENST00000614678 CYB5R1Q9UHQ9 305 aa4.85□□□□□ -1.63
CPNE3-208ENST00000614678 TIMM10BQ9Y5J6 103 aa4.85□□□□□ -1.63
CPNE3-208ENST00000614678 ARPC3O15145 178 aa4.85□□□□□ -1.63
CPNE3-208ENST00000614678 ABHD16AO95870 558 aa4.85□□□□□ -1.63
CPNE3-208ENST00000614678 SPARCP09486 303 aa4.85□□□□□ -1.63
CPNE3-208ENST00000614678 APLNRP35414 380 aa4.85□□□□□ -1.63
CPNE3-208ENST00000614678 EFNA4P52798 201 aa4.85□□□□□ -1.63
CPNE3-208ENST00000614678 SEC61A1P61619 476 aaKnown RBP4.85□□□□□ -1.63
CPNE3-208ENST00000614678 PPP1CBP62140 327 aa4.85□□□□□ -1.63
CPNE3-208ENST00000614678 SNRPD2P62316 118 aaKnown RBP4.85□□□□□ -1.63
CPNE3-208ENST00000614678 MVKQ03426 396 aa4.85□□□□□ -1.63
CPNE3-208ENST00000614678 TBC1D28Q2M2D7 210 aa4.85□□□□□ -1.63
CPNE3-208ENST00000614678 ATG16L2Q8NAA4 619 aa4.85□□□□□ -1.63
CPNE3-208ENST00000614678 PAPD5Q8NDF8 572 aaKnown RBP4.85□□□□□ -1.63
CPNE3-208ENST00000614678 CMBLQ96DG6 245 aa4.85□□□□□ -1.63
CPNE3-208ENST00000614678 SLC29A1Q99808 456 aa4.85□□□□□ -1.63
CPNE3-208ENST00000614678 NMNAT2Q9BZQ4 307 aa4.85□□□□□ -1.63
CPNE3-208ENST00000614678 TVP23BQ9NYZ1 205 aa4.85□□□□□ -1.63
CPNE3-208ENST00000614678 POLR1DQ9Y2S0 133 aa4.85□□□□□ -1.63
CPNE3-208ENST00000614678 IQCMA0A1B0GVH7 501 aa4.84□□□□□ -1.63
CPNE3-208ENST00000614678 OR6C6A6NF89 314 aa4.84□□□□□ -1.63
CPNE3-208ENST00000614678 A6NIN4 97 aa4.84□□□□□ -1.63
CPNE3-208ENST00000614678 A6NIZ1 184 aa4.84□□□□□ -1.63
CPNE3-208ENST00000614678 B9A039 149 aa4.84□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms