RNA–Protein interactions for RNA: ENST00000614659.1

SNPH-203, Transcript of syntaphilin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SNPH, Length 5,354 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNPH-203ENST00000614659 EXOSC3Q9NQT5 275 aaKnown RBP13.39□□□□□ -0.27
SNPH-203ENST00000614659 ZNF346Q9UL40 294 aaKnown RBP13.39□□□□□ -0.27
SNPH-203ENST00000614659 TRBV5-3A0A0A0MS03 114 aa13.38□□□□□ -0.27
SNPH-203ENST00000614659 A0A0U1RQK1 487 aa13.38□□□□□ -0.27
SNPH-203ENST00000614659 TGM1P22735 817 aa13.38□□□□□ -0.27
SNPH-203ENST00000614659 SLC25A1P53007 311 aa13.38□□□□□ -0.27
SNPH-203ENST00000614659 MEX3BQ6ZN04 569 aaKnown RBP13.38□□□□□ -0.27
SNPH-203ENST00000614659 PCNPQ8WW12 178 aaKnown RBP13.38□□□□□ -0.27
SNPH-203ENST00000614659 PIGCQ92535 297 aa13.38□□□□□ -0.27
SNPH-203ENST00000614659 ERVMER34-1Q9H9K5 563 aa13.38□□□□□ -0.27
SNPH-203ENST00000614659 NECAP2Q9NVZ3 263 aa13.38□□□□□ -0.27
SNPH-203ENST00000614659 MPPED1O15442 326 aa13.38□□□□□ -0.27
SNPH-203ENST00000614659 B3GALNT1O75752 331 aa13.38□□□□□ -0.27
SNPH-203ENST00000614659 OR2F2O95006 317 aa13.38□□□□□ -0.27
SNPH-203ENST00000614659 BLVRBP30043 206 aaPredicted RBP13.38□□□□□ -0.27
SNPH-203ENST00000614659 OR2F1Q13607 317 aa13.38□□□□□ -0.27
SNPH-203ENST00000614659 FZD2Q14332 565 aa13.38□□□□□ -0.27
SNPH-203ENST00000614659 SLC9A3R2Q15599 337 aa13.38□□□□□ -0.27
SNPH-203ENST00000614659 SLC16A12Q6ZSM3 486 aa13.38□□□□□ -0.27
SNPH-203ENST00000614659 SIRT6Q8N6T7 355 aa13.38□□□□□ -0.27
SNPH-203ENST00000614659 OR4D6Q8NGJ1 314 aa13.38□□□□□ -0.27
SNPH-203ENST00000614659 OR52I2Q8NH67 350 aa13.38□□□□□ -0.27
SNPH-203ENST00000614659 PSMF1Q92530 271 aa13.38□□□□□ -0.27
SNPH-203ENST00000614659 SAMD10Q9BYL1 202 aa13.38□□□□□ -0.27
SNPH-203ENST00000614659 SMLR1H3BR10 107 aa13.38□□□□□ -0.27
SNPH-203ENST00000614659 CD160O95971 181 aa13.38□□□□□ -0.27
SNPH-203ENST00000614659 SCAND1P57086 179 aa13.38□□□□□ -0.27
SNPH-203ENST00000614659 BBS1Q8NFJ9 593 aa13.38□□□□□ -0.27
SNPH-203ENST00000614659 OR1M1Q8NGA1 313 aa13.38□□□□□ -0.27
SNPH-203ENST00000614659 C16orf52Q8NHV5 167 aa13.38□□□□□ -0.27
SNPH-203ENST00000614659 EID2BQ96D98 161 aa13.38□□□□□ -0.27
SNPH-203ENST00000614659 COX14Q96I36 57 aa13.38□□□□□ -0.27
SNPH-203ENST00000614659 GDF15Q99988 308 aa13.38□□□□□ -0.27
SNPH-203ENST00000614659 POFUT1Q9H488 388 aa13.38□□□□□ -0.27
SNPH-203ENST00000614659 OCEL1Q9H607 264 aa13.38□□□□□ -0.27
SNPH-203ENST00000614659 R4GMQ9 66 aa13.38□□□□□ -0.27
SNPH-203ENST00000614659 NKX2-2O95096 273 aa13.38□□□□□ -0.27
SNPH-203ENST00000614659 HBE1P02100 147 aa13.38□□□□□ -0.27
SNPH-203ENST00000614659 SERPINA7P05543 415 aa13.38□□□□□ -0.27
SNPH-203ENST00000614659 EIF4EP06730 217 aaKnown RBP13.38□□□□□ -0.27
SNPH-203ENST00000614659 ZNF728P0DKX0 622 aa13.38□□□□□ -0.27
SNPH-203ENST00000614659 RPL18Q07020 188 aaKnown RBP13.38□□□□□ -0.27
SNPH-203ENST00000614659 FAM122BQ7Z309 247 aa13.38□□□□□ -0.27
SNPH-203ENST00000614659 BORCS7Q96B45 105 aa13.38□□□□□ -0.27
SNPH-203ENST00000614659 NKX3-1Q99801 234 aaPredicted RBP13.38□□□□□ -0.27
SNPH-203ENST00000614659 SELENOIQ9C0D9 397 aa13.38□□□□□ -0.27
SNPH-203ENST00000614659 LOC107986453A0A1B0GWG9 222 aa13.37□□□□□ -0.27
SNPH-203ENST00000614659 PRSS37A4D1T9 235 aa13.37□□□□□ -0.27
SNPH-203ENST00000614659 MCRIP1C9JLW8 97 aa13.37□□□□□ -0.27
SNPH-203ENST00000614659 PPT1P50897 306 aa13.37□□□□□ -0.27
SNPH-203ENST00000614659 ACSM1Q08AH1 577 aa13.37□□□□□ -0.27
SNPH-203ENST00000614659 DHRS13Q6UX07 377 aa13.37□□□□□ -0.27
SNPH-203ENST00000614659 CCL27Q9Y4X3 112 aa13.37□□□□□ -0.27
SNPH-203ENST00000614659 HOXB5P09067 269 aa13.37□□□□□ -0.27
SNPH-203ENST00000614659 ITGB8P26012 769 aa13.37□□□□□ -0.27
SNPH-203ENST00000614659 DGCR2P98153 550 aa13.37□□□□□ -0.27
SNPH-203ENST00000614659 HIST2H3PS2Q5TEC6 136 aa13.37□□□□□ -0.27
SNPH-203ENST00000614659 GLIPR1L1Q6UWM5 242 aa13.37□□□□□ -0.27
SNPH-203ENST00000614659 OCSTAMPQ9BR26 566 aa13.37□□□□□ -0.27
SNPH-203ENST00000614659 SLC17A5Q9NRA2 495 aa13.37□□□□□ -0.27
SNPH-203ENST00000614659 A0A0B4J2A0 478 aa13.37□□□□□ -0.27
SNPH-203ENST00000614659 FAM166BA8MTA8 275 aa13.37□□□□□ -0.27
SNPH-203ENST00000614659 PRICKLE3O43900 615 aaPredicted RBP13.37□□□□□ -0.27
SNPH-203ENST00000614659 SSPNQ14714 243 aa13.37□□□□□ -0.27
SNPH-203ENST00000614659 LINC00346Q8IVM7 164 aa13.37□□□□□ -0.27
SNPH-203ENST00000614659 PAPOLGQ9BWT3 736 aaKnown RBP13.37□□□□□ -0.27
SNPH-203ENST00000614659 SHPKQ9UHJ6 478 aa13.37□□□□□ -0.27
SNPH-203ENST00000614659 TRGV8A0A0C4DH27 118 aa13.37□□□□□ -0.27
SNPH-203ENST00000614659 FBXO24O75426 580 aa13.37□□□□□ -0.27
SNPH-203ENST00000614659 SRP9P49458 86 aaKnown RBP13.37□□□□□ -0.27
SNPH-203ENST00000614659 ACKR1Q16570 336 aa13.37□□□□□ -0.27
SNPH-203ENST00000614659 ZNF813Q6ZN06 617 aa13.37□□□□□ -0.27
SNPH-203ENST00000614659 ZC3HAV1Q7Z2W4 902 aaKnown RBP13.37□□□□□ -0.27
SNPH-203ENST00000614659 MRGPRX4Q96LA9 322 aa13.37□□□□□ -0.27
SNPH-203ENST00000614659 RPP25Q9BUL9 199 aaKnown RBP13.37□□□□□ -0.27
SNPH-203ENST00000614659 GPR87Q9BY21 358 aa13.37□□□□□ -0.27
SNPH-203ENST00000614659 HRASLSQ9HDD0 168 aa13.37□□□□□ -0.27
SNPH-203ENST00000614659 SLC22A11Q9NSA0 550 aa13.37□□□□□ -0.27
SNPH-203ENST00000614659 FOXJ3Q9UPW0 622 aa13.37□□□□□ -0.27
SNPH-203ENST00000614659 A0A0A6YYJ9 748 aa13.36□□□□□ -0.27
SNPH-203ENST00000614659 A0A0B4J2E0 115 aa13.36□□□□□ -0.27
SNPH-203ENST00000614659 A0A1B0GX12 115 aa13.36□□□□□ -0.27
SNPH-203ENST00000614659 ZC3H12DA2A288 527 aaKnown RBP13.36□□□□□ -0.27
SNPH-203ENST00000614659 TAAR5O14804 337 aa13.36□□□□□ -0.27
SNPH-203ENST00000614659 MSR1P21757 451 aa13.36□□□□□ -0.27
SNPH-203ENST00000614659 ZIC1Q15915 447 aa13.36□□□□□ -0.27
SNPH-203ENST00000614659 COL13A1Q5TAT6 717 aaPredicted RBP13.36□□□□□ -0.27
SNPH-203ENST00000614659 GFRALQ6UXV0 394 aa13.36□□□□□ -0.27
SNPH-203ENST00000614659 SMIM4Q8WVI0 70 aa13.36□□□□□ -0.27
SNPH-203ENST00000614659 DBHP09172 617 aa13.36□□□□□ -0.27
SNPH-203ENST00000614659 AVPR2P30518 371 aa13.36□□□□□ -0.27
SNPH-203ENST00000614659 EMDP50402 254 aa13.36□□□□□ -0.27
SNPH-203ENST00000614659 SEC61A1P61619 476 aaKnown RBP13.36□□□□□ -0.27
SNPH-203ENST00000614659 CATR1Q13166 79 aa13.36□□□□□ -0.27
SNPH-203ENST00000614659 SLC17A1Q14916 467 aa13.36□□□□□ -0.27
SNPH-203ENST00000614659 MAML2Q8IZL2 1156 aaPredicted RBP13.36□□□□□ -0.27
SNPH-203ENST00000614659 PLPP7Q8NBV4 271 aa13.36□□□□□ -0.27
SNPH-203ENST00000614659 PATE1Q8WXA2 126 aa13.36□□□□□ -0.27
SNPH-203ENST00000614659 UPRTQ96BW1 309 aa13.36□□□□□ -0.27
SNPH-203ENST00000614659 SEC22CQ9BRL7 303 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms