RNA–Protein interactions for RNA: ENST00000612497.1

SSX3-204, Transcript of SSX family member 3, humanhuman

TSL 5 BASIC

Gene SSX3, Length 1,030 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX3-204ENST00000612497 A0A1W2PRG6 482 aa8.42□□□□□ -1.06
SSX3-204ENST00000612497 NPFFO15130 113 aa8.42□□□□□ -1.06
SSX3-204ENST00000612497 ADAM20O43506 726 aa8.42□□□□□ -1.06
SSX3-204ENST00000612497 TRMUO75648 421 aaKnown RBP8.42□□□□□ -1.06
SSX3-204ENST00000612497 ANP32DO95626 131 aa8.42□□□□□ -1.06
SSX3-204ENST00000612497 F13BP05160 661 aa8.42□□□□□ -1.06
SSX3-204ENST00000612497 UMPSP11172 480 aa8.42□□□□□ -1.06
SSX3-204ENST00000612497 ACADSP16219 412 aa8.42□□□□□ -1.06
SSX3-204ENST00000612497 LAP3P28838 519 aa8.42□□□□□ -1.06
SSX3-204ENST00000612497 RPL4P36578 427 aaKnown RBP8.42□□□□□ -1.06
SSX3-204ENST00000612497 SERPINB5P36952 375 aa8.42□□□□□ -1.06
SSX3-204ENST00000612497 PCBD1P61457 104 aa8.42□□□□□ -1.06
SSX3-204ENST00000612497 UFM1P61960 85 aa8.42□□□□□ -1.06
SSX3-204ENST00000612497 SLC35A2P78381 396 aa8.42□□□□□ -1.06
SSX3-204ENST00000612497 GUCA2AQ02747 115 aa8.42□□□□□ -1.06
SSX3-204ENST00000612497 PRB3Q04118 309 aaPredicted RBP8.42□□□□□ -1.06
SSX3-204ENST00000612497 LRRC74AQ0VAA2 488 aa8.42□□□□□ -1.06
SSX3-204ENST00000612497 DCTN2Q13561 401 aaKnown RBP8.42□□□□□ -1.06
SSX3-204ENST00000612497 KCNJ8Q15842 424 aa8.42□□□□□ -1.06
SSX3-204ENST00000612497 ZNF74Q16587 644 aa8.42□□□□□ -1.06
SSX3-204ENST00000612497 CDONQ4KMG0 1287 aa8.42□□□□□ -1.06
SSX3-204ENST00000612497 SFRP4Q6FHJ7 346 aaPredicted RBP8.42□□□□□ -1.06
SSX3-204ENST00000612497 C1orf94Q6P1W5 598 aa8.42□□□□□ -1.06
SSX3-204ENST00000612497 BTN2A1Q7KYR7 527 aa8.42□□□□□ -1.06
SSX3-204ENST00000612497 RNF144BQ7Z419 303 aa8.42□□□□□ -1.06
SSX3-204ENST00000612497 RANBP3LQ86VV4 465 aaPredicted RBP8.42□□□□□ -1.06
SSX3-204ENST00000612497 BOLLQ8N9W6 283 aaKnown RBP8.42□□□□□ -1.06
SSX3-204ENST00000612497 OR8G5Q8NG78 346 aa8.42□□□□□ -1.06
SSX3-204ENST00000612497 OR11L1Q8NGX0 322 aa8.42□□□□□ -1.06
SSX3-204ENST00000612497 BBS10Q8TAM1 723 aa8.42□□□□□ -1.06
SSX3-204ENST00000612497 MAL2Q969L2 176 aa8.42□□□□□ -1.06
SSX3-204ENST00000612497 ZIM3Q96PE6 472 aa8.42□□□□□ -1.06
SSX3-204ENST00000612497 SEPHS2Q99611 448 aa8.42□□□□□ -1.06
SSX3-204ENST00000612497 RANBP3Q9H6Z4 567 aaPredicted RBP8.42□□□□□ -1.06
SSX3-204ENST00000612497 SMURF1Q9HCE7 757 aa8.42□□□□□ -1.06
SSX3-204ENST00000612497 BCL2L10Q9HD36 194 aa8.42□□□□□ -1.06
SSX3-204ENST00000612497 THUMPD1Q9NXG2 353 aaKnown RBP8.42□□□□□ -1.06
SSX3-204ENST00000612497 ONECUT1Q9UBC0 465 aa8.42□□□□□ -1.06
SSX3-204ENST00000612497 DNAJB11Q9UBS4 358 aa8.42□□□□□ -1.06
SSX3-204ENST00000612497 KPTNQ9Y664 436 aa8.42□□□□□ -1.06
SSX3-204ENST00000612497 IGKV1D-43A0A0B4J1Z2 117 aa8.41□□□□□ -1.06
SSX3-204ENST00000612497 A0A1W2PRX2 142 aa8.41□□□□□ -1.06
SSX3-204ENST00000612497 MEIOCA2RUB1 952 aa8.41□□□□□ -1.06
SSX3-204ENST00000612497 SMIM23A6NLE4 172 aa8.41□□□□□ -1.06
SSX3-204ENST00000612497 CENPBD1B2RD01 187 aa8.41□□□□□ -1.06
SSX3-204ENST00000612497 C5orf58C9J3I9 102 aa8.41□□□□□ -1.06
SSX3-204ENST00000612497 BLOC1S5-TXNDC5H3BN57 136 aa8.41□□□□□ -1.06
SSX3-204ENST00000612497 MLNRO43193 412 aa8.41□□□□□ -1.06
SSX3-204ENST00000612497 TPST1O60507 370 aa8.41□□□□□ -1.06
SSX3-204ENST00000612497 FMO6PO60774 539 aa8.41□□□□□ -1.06
SSX3-204ENST00000612497 CST2P09228 141 aa8.41□□□□□ -1.06
SSX3-204ENST00000612497 PF4V1P10720 104 aa8.41□□□□□ -1.06
SSX3-204ENST00000612497 RAC2P15153 192 aa8.41□□□□□ -1.06
SSX3-204ENST00000612497 HOXD3P31249 432 aaPredicted RBP8.41□□□□□ -1.06
SSX3-204ENST00000612497 GUCA1AP43080 201 aaPredicted RBP8.41□□□□□ -1.06
SSX3-204ENST00000612497 ZNF133P52736 654 aaPredicted RBP8.41□□□□□ -1.06
SSX3-204ENST00000612497 RGS8P57771 180 aaPredicted RBP8.41□□□□□ -1.06
SSX3-204ENST00000612497 HOXA4Q00056 320 aaPredicted RBP8.41□□□□□ -1.06
SSX3-204ENST00000612497 FMODQ06828 376 aa8.41□□□□□ -1.06
SSX3-204ENST00000612497 CKAP4Q07065 602 aaKnown RBP8.41□□□□□ -1.06
SSX3-204ENST00000612497 CD47Q08722 323 aa8.41□□□□□ -1.06
SSX3-204ENST00000612497 OR2T2Q6IF00 324 aa8.41□□□□□ -1.06
SSX3-204ENST00000612497 HDDC2Q7Z4H3 204 aa8.41□□□□□ -1.06
SSX3-204ENST00000612497 DTX3Q8N9I9 347 aa8.41□□□□□ -1.06
SSX3-204ENST00000612497 PAPD5Q8NDF8 572 aaKnown RBP8.41□□□□□ -1.06
SSX3-204ENST00000612497 MUC7Q8TAX7 377 aa8.41□□□□□ -1.06
SSX3-204ENST00000612497 ASB10Q8WXI3 467 aa8.41□□□□□ -1.06
SSX3-204ENST00000612497 COG8Q96MW5 612 aa8.41□□□□□ -1.06
SSX3-204ENST00000612497 ZNF582Q96NG8 517 aaPredicted RBP8.41□□□□□ -1.06
SSX3-204ENST00000612497 SSX3Q99909 188 aa8.41□□□□□ -1.06
SSX3-204ENST00000612497 NPFFR1Q9GZQ6 430 aa8.41□□□□□ -1.06
SSX3-204ENST00000612497 FAM234AQ9H0X4 552 aa8.41□□□□□ -1.06
SSX3-204ENST00000612497 SMURF2Q9HAU4 748 aa8.41□□□□□ -1.06
SSX3-204ENST00000612497 TPT1P8Q9HAU6 139 aa8.41□□□□□ -1.06
SSX3-204ENST00000612497 SIRT7Q9NRC8 400 aa8.41□□□□□ -1.06
SSX3-204ENST00000612497 SLC13A4Q9UKG4 626 aa8.41□□□□□ -1.06
SSX3-204ENST00000612497 MAB21L2Q9Y586 359 aa8.41□□□□□ -1.06
SSX3-204ENST00000612497 KPNA4O00629 521 aaPredicted RBP8.4□□□□□ -1.06
SSX3-204ENST00000612497 FAM20BO75063 409 aa8.4□□□□□ -1.06
SSX3-204ENST00000612497 PEX14O75381 377 aa8.4□□□□□ -1.06
SSX3-204ENST00000612497 ECDO95905 644 aaPredicted RBP8.4□□□□□ -1.06
SSX3-204ENST00000612497 HLA-DPB1P04440 258 aa8.4□□□□□ -1.06
SSX3-204ENST00000612497 ETS2P15036 469 aa8.4□□□□□ -1.06
SSX3-204ENST00000612497 LBPP18428 481 aa8.4□□□□□ -1.06
SSX3-204ENST00000612497 IL12AP29459 219 aa8.4□□□□□ -1.06
SSX3-204ENST00000612497 SAA4P35542 130 aa8.4□□□□□ -1.06
SSX3-204ENST00000612497 HTR5AP47898 357 aa8.4□□□□□ -1.06
SSX3-204ENST00000612497 DAP3P51398 398 aaKnown RBP8.4□□□□□ -1.06
SSX3-204ENST00000612497 EGFEM1PQ0D2K5 195 aa8.4□□□□□ -1.06
SSX3-204ENST00000612497 OR8B8Q15620 311 aa8.4□□□□□ -1.06
SSX3-204ENST00000612497 SWT1Q5T5J6 900 aaKnown RBP8.4□□□□□ -1.06
SSX3-204ENST00000612497 METAP1DQ6UB28 335 aaPredicted RBP8.4□□□□□ -1.06
SSX3-204ENST00000612497 NANOGNBQ7Z5D8 188 aa8.4□□□□□ -1.06
SSX3-204ENST00000612497 PNKDQ8N490 385 aa8.4□□□□□ -1.06
SSX3-204ENST00000612497 CLDN22Q8N7P3 220 aa8.4□□□□□ -1.06
SSX3-204ENST00000612497 BHLHE23Q8NDY6 225 aa8.4□□□□□ -1.06
SSX3-204ENST00000612497 DPF1Q92782 380 aa8.4□□□□□ -1.06
SSX3-204ENST00000612497 RCC1LQ96I51 464 aaKnown RBP8.4□□□□□ -1.06
SSX3-204ENST00000612497 NKX3-1Q99801 234 aaPredicted RBP8.4□□□□□ -1.06
SSX3-204ENST00000612497 PCDHAC1Q9H158 963 aa8.4□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms