RNA–Protein interactions for RNA: ENST00000607482.5

CTSA-217, Transcript of cathepsin A, humanhuman

TSL 3

Gene CTSA, Length 403 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-217ENST00000607482 TREM2Q9NZC2 230 aa16.39■□□□□ 0.21
CTSA-217ENST00000607482 TMEFF2Q9UIK5 374 aaPredicted RBP16.39■□□□□ 0.21
CTSA-217ENST00000607482 ZDHHC8Q9ULC8 765 aa16.39■□□□□ 0.21
CTSA-217ENST00000607482 RNF212BA8MTL3 300 aa16.38■□□□□ 0.21
CTSA-217ENST00000607482 IDH3BO43837 385 aa16.38■□□□□ 0.21
CTSA-217ENST00000607482 TXNDC12O95881 172 aa16.38■□□□□ 0.21
CTSA-217ENST00000607482 TFP02787 698 aa16.38■□□□□ 0.21
CTSA-217ENST00000607482 CRYBB2P43320 205 aa16.38■□□□□ 0.21
CTSA-217ENST00000607482 TSPAN31Q12999 210 aa16.38■□□□□ 0.21
CTSA-217ENST00000607482 CR1LQ2VPA4 569 aa16.38■□□□□ 0.21
CTSA-217ENST00000607482 SLC36A3Q495N2 470 aa16.38■□□□□ 0.21
CTSA-217ENST00000607482 FAM209AQ5JX71 171 aa16.38■□□□□ 0.21
CTSA-217ENST00000607482 CLEC12AQ5QGZ9 265 aa16.38■□□□□ 0.21
CTSA-217ENST00000607482 RPL13AP3Q6NVV1 102 aa16.38■□□□□ 0.21
CTSA-217ENST00000607482 GLCCI1Q86VQ1 547 aa16.38■□□□□ 0.21
CTSA-217ENST00000607482 OR5L1Q8NGL2 311 aa16.38■□□□□ 0.21
CTSA-217ENST00000607482 OR2AJ1Q8NGZ0 328 aa16.38■□□□□ 0.21
CTSA-217ENST00000607482 CLDND2Q8NHS1 167 aa16.38■□□□□ 0.21
CTSA-217ENST00000607482 GTF3AQ92664 365 aaKnown RBP16.38■□□□□ 0.21
CTSA-217ENST00000607482 RAB1CQ92928 201 aa16.38■□□□□ 0.21
CTSA-217ENST00000607482 POP5Q969H6 163 aaKnown RBP16.38■□□□□ 0.21
CTSA-217ENST00000607482 TSSK2Q96PF2 358 aa16.38■□□□□ 0.21
CTSA-217ENST00000607482 DIRC2Q96SL1 478 aa16.38■□□□□ 0.21
CTSA-217ENST00000607482 MDFIQ99750 246 aa16.38■□□□□ 0.21
CTSA-217ENST00000607482 FUZQ9BT04 418 aa16.38■□□□□ 0.21
CTSA-217ENST00000607482 LPAR2Q9HBW0 351 aa16.38■□□□□ 0.21
CTSA-217ENST00000607482 RPRD1BQ9NQG5 326 aaKnown RBP16.38■□□□□ 0.21
CTSA-217ENST00000607482 TBCCD1Q9NVR7 557 aa16.38■□□□□ 0.21
CTSA-217ENST00000607482 OR6C6A6NF89 314 aa16.37■□□□□ 0.21
CTSA-217ENST00000607482 CCNB2O95067 398 aa16.37■□□□□ 0.21
CTSA-217ENST00000607482 IGHV1-46P01743 117 aa16.37■□□□□ 0.21
CTSA-217ENST00000607482 ANPEPP15144 967 aa16.37■□□□□ 0.21
CTSA-217ENST00000607482 HIST1H1CP16403 213 aaKnown RBP16.37■□□□□ 0.21
CTSA-217ENST00000607482 FXYD6P3P58550 94 aa16.37■□□□□ 0.21
CTSA-217ENST00000607482 SLC3A1Q07837 685 aa16.37■□□□□ 0.21
CTSA-217ENST00000607482 SLC35F1Q5T1Q4 408 aa16.37■□□□□ 0.21
CTSA-217ENST00000607482 AVPI1Q5T686 147 aa16.37■□□□□ 0.21
CTSA-217ENST00000607482 OR52E2Q8NGJ4 325 aa16.37■□□□□ 0.21
CTSA-217ENST00000607482 SOX7Q9BT81 388 aa16.37■□□□□ 0.21
CTSA-217ENST00000607482 REEP1Q9H902 201 aa16.37■□□□□ 0.21
CTSA-217ENST00000607482 MSL2Q9HCI7 577 aa16.37■□□□□ 0.21
CTSA-217ENST00000607482 B9D1Q9UPM9 204 aa16.37■□□□□ 0.21
CTSA-217ENST00000607482 ISPDA4D126 451 aa16.36■□□□□ 0.21
CTSA-217ENST00000607482 ARPC3O15145 178 aa16.36■□□□□ 0.21
CTSA-217ENST00000607482 RER1O15258 196 aa16.36■□□□□ 0.21
CTSA-217ENST00000607482 ZNF823P16415 610 aa16.36■□□□□ 0.21
CTSA-217ENST00000607482 ATP6V1B2P21281 511 aa16.36■□□□□ 0.21
CTSA-217ENST00000607482 RGS6P49758 472 aa16.36■□□□□ 0.21
CTSA-217ENST00000607482 MMP15P51511 669 aa16.36■□□□□ 0.21
CTSA-217ENST00000607482 TRIM25Q14258 630 aaKnown RBP16.36■□□□□ 0.21
CTSA-217ENST00000607482 PGBD2Q6P3X8 592 aa16.36■□□□□ 0.21
CTSA-217ENST00000607482 TMEM158Q8WZ71 300 aa16.36■□□□□ 0.21
CTSA-217ENST00000607482 SLC7A6Q92536 515 aa16.36■□□□□ 0.21
CTSA-217ENST00000607482 CCDC124Q96CT7 223 aaKnown RBP16.36■□□□□ 0.21
CTSA-217ENST00000607482 RAB39BQ96DA2 213 aa16.36■□□□□ 0.21
CTSA-217ENST00000607482 CMBLQ96DG6 245 aa16.36■□□□□ 0.21
CTSA-217ENST00000607482 PITX2Q99697 317 aa16.36■□□□□ 0.21
CTSA-217ENST00000607482 TRIM15Q9C019 465 aa16.36■□□□□ 0.21
CTSA-217ENST00000607482 MAGIXQ9H6Y5 334 aa16.36■□□□□ 0.21
CTSA-217ENST00000607482 PRPF19Q9UMS4 504 aaKnown RBP16.36■□□□□ 0.21
CTSA-217ENST00000607482 YLPM1P49750 1951 aaKnown RBP16.36■□□□□ 0.21
CTSA-217ENST00000607482 ICMTO60725 284 aa16.35■□□□□ 0.21
CTSA-217ENST00000607482 RP2O75695 350 aa16.35■□□□□ 0.21
CTSA-217ENST00000607482 GPANK1O95872 356 aa16.35■□□□□ 0.21
CTSA-217ENST00000607482 GSSP48637 474 aa16.35■□□□□ 0.21
CTSA-217ENST00000607482 DVL1P1P54792 670 aaPredicted RBP16.35■□□□□ 0.21
CTSA-217ENST00000607482 TNFAIP6P98066 277 aaPredicted RBP16.35■□□□□ 0.21
CTSA-217ENST00000607482 KHDRBS1Q07666 443 aaKnown RBP eCLIP16.35■□□□□ 0.21
CTSA-217ENST00000607482 PSG7Q13046 419 aa16.35■□□□□ 0.21
CTSA-217ENST00000607482 KCNMB1Q16558 191 aa16.35■□□□□ 0.21
CTSA-217ENST00000607482 MEP1BQ16820 701 aa16.35■□□□□ 0.21
CTSA-217ENST00000607482 SHQ1Q6PI26 577 aaKnown RBP16.35■□□□□ 0.21
CTSA-217ENST00000607482 ZNF620Q6ZNG0 422 aa16.35■□□□□ 0.21
CTSA-217ENST00000607482 RINLQ6ZS11 566 aa16.35■□□□□ 0.21
CTSA-217ENST00000607482 CXXC5Q7LFL8 322 aaKnown RBP16.35■□□□□ 0.21
CTSA-217ENST00000607482 OR6V1Q8N148 313 aa16.35■□□□□ 0.21
CTSA-217ENST00000607482 SDR9C7Q8NEX9 313 aa16.35■□□□□ 0.21
CTSA-217ENST00000607482 PROKR2Q8NFJ6 384 aa16.35■□□□□ 0.21
CTSA-217ENST00000607482 OR2Z1Q8NG97 314 aa16.35■□□□□ 0.21
CTSA-217ENST00000607482 OR51F2Q8NH61 342 aa16.35■□□□□ 0.21
CTSA-217ENST00000607482 PTP4A1Q93096 173 aa16.35■□□□□ 0.21
CTSA-217ENST00000607482 DCLRE1CQ96SD1 692 aaKnown RBP16.35■□□□□ 0.21
CTSA-217ENST00000607482 HDHD2Q9H0R4 259 aa16.35■□□□□ 0.21
CTSA-217ENST00000607482 EGLN3Q9H6Z9 239 aa16.35■□□□□ 0.21
CTSA-217ENST00000607482 TBC1D23Q9NUY8 699 aa16.35■□□□□ 0.21
CTSA-217ENST00000607482 SAMHD1Q9Y3Z3 626 aaKnown RBP16.35■□□□□ 0.21
CTSA-217ENST00000607482 LYVE1Q9Y5Y7 322 aa16.35■□□□□ 0.21
CTSA-217ENST00000607482 CDH10Q9Y6N8 788 aa16.35■□□□□ 0.21
CTSA-217ENST00000607482 U3KQV3 271 aa16.35■□□□□ 0.21
CTSA-217ENST00000607482 ZSCAN5BA6NJL1 495 aa16.34■□□□□ 0.21
CTSA-217ENST00000607482 GNGT2O14610 69 aa16.34■□□□□ 0.21
CTSA-217ENST00000607482 SURF4O15260 269 aa16.34■□□□□ 0.21
CTSA-217ENST00000607482 MSMBP08118 114 aa16.34■□□□□ 0.21
CTSA-217ENST00000607482 CCDC92Q53HC0 331 aaPredicted RBP16.34■□□□□ 0.21
CTSA-217ENST00000607482 CORO6Q6QEF8 472 aa16.34■□□□□ 0.21
CTSA-217ENST00000607482 AQP11Q8NBQ7 271 aa16.34■□□□□ 0.21
CTSA-217ENST00000607482 OR9Q2Q8NGE9 314 aa16.34■□□□□ 0.21
CTSA-217ENST00000607482 GAL3ST1Q99999 423 aa16.34■□□□□ 0.21
CTSA-217ENST00000607482 FN3KQ9H479 309 aa16.34■□□□□ 0.21
CTSA-217ENST00000607482 HIF1ANQ9NWT6 349 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms