RNA–Protein interactions for RNA: ENST00000600659.2

RPS28-203, Transcript of ribosomal protein S28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPS28, Length 1,326 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-203ENST00000600659 ATPIF1Q9UII2 106 aa13.48□□□□□ -0.25
RPS28-203ENST00000600659 NDRG4Q9ULP0 352 aaKnown RBP13.48□□□□□ -0.25
RPS28-203ENST00000600659 TANC2Q9HCD6 1990 aa13.48□□□□□ -0.25
RPS28-203ENST00000600659 VSTM5A8MXK1 200 aa13.47□□□□□ -0.25
RPS28-203ENST00000600659 DEAF1O75398 565 aaPredicted RBP13.47□□□□□ -0.25
RPS28-203ENST00000600659 E2F6O75461 281 aa13.47□□□□□ -0.25
RPS28-203ENST00000600659 NCR1O76036 304 aa13.47□□□□□ -0.25
RPS28-203ENST00000600659 LY6G6DO95868 133 aa13.47□□□□□ -0.25
RPS28-203ENST00000600659 OSMP13725 252 aa13.47□□□□□ -0.25
RPS28-203ENST00000600659 SPI1P17947 270 aa13.47□□□□□ -0.25
RPS28-203ENST00000600659 GRK5P34947 590 aa13.47□□□□□ -0.25
RPS28-203ENST00000600659 RPS27P42677 84 aaKnown RBP13.47□□□□□ -0.25
RPS28-203ENST00000600659 DAPP51397 102 aa13.47□□□□□ -0.25
RPS28-203ENST00000600659 SLC25A1P53007 311 aa13.47□□□□□ -0.25
RPS28-203ENST00000600659 SPATA46Q5T0L3 261 aa13.47□□□□□ -0.25
RPS28-203ENST00000600659 CLEC2AQ6UVW9 174 aa13.47□□□□□ -0.25
RPS28-203ENST00000600659 OR51L1Q8NGJ5 315 aa13.47□□□□□ -0.25
RPS28-203ENST00000600659 OR10S1Q8NGN2 331 aa13.47□□□□□ -0.25
RPS28-203ENST00000600659 OR1F12Q8NHA8 337 aa13.47□□□□□ -0.25
RPS28-203ENST00000600659 SYNPRQ8TBG9 265 aa13.47□□□□□ -0.25
RPS28-203ENST00000600659 TEX47Q8TBZ9 253 aa13.47□□□□□ -0.25
RPS28-203ENST00000600659 IPCEF1Q8WWN9 437 aaPredicted RBP13.47□□□□□ -0.25
RPS28-203ENST00000600659 NRBF2Q96F24 287 aa13.47□□□□□ -0.25
RPS28-203ENST00000600659 C4orf45Q96LM5 186 aa13.47□□□□□ -0.25
RPS28-203ENST00000600659 OR2J1Q9GZK6 312 aa13.47□□□□□ -0.25
RPS28-203ENST00000600659 DYNLRB1Q9NP97 96 aa13.47□□□□□ -0.25
RPS28-203ENST00000600659 DUSP13Q9UII6 198 aa13.47□□□□□ -0.25
RPS28-203ENST00000600659 KLHL21Q9UJP4 597 aa13.47□□□□□ -0.25
RPS28-203ENST00000600659 FBXO9Q9UK97 447 aaPredicted RBP13.47□□□□□ -0.25
RPS28-203ENST00000600659 COMMD3-BMI1R4GMX3 469 aa13.47□□□□□ -0.25
RPS28-203ENST00000600659 SVEP1Q4LDE5 3571 aa13.47□□□□□ -0.25
RPS28-203ENST00000600659 SONP18583 2426 aaKnown RBP13.47□□□□□ -0.25
RPS28-203ENST00000600659 NF1P21359 2839 aa13.46□□□□□ -0.25
RPS28-203ENST00000600659 NAV3Q8IVL0 2385 aa13.46□□□□□ -0.25
RPS28-203ENST00000600659 IGHV3-13P01766 116 aa13.46□□□□□ -0.25
RPS28-203ENST00000600659 GYPBP06028 91 aa13.46□□□□□ -0.25
RPS28-203ENST00000600659 ANXA8P13928 327 aa13.46□□□□□ -0.25
RPS28-203ENST00000600659 ANOS1P23352 680 aa13.46□□□□□ -0.25
RPS28-203ENST00000600659 KLF3P57682 345 aaPredicted RBP13.46□□□□□ -0.25
RPS28-203ENST00000600659 CDK5Q00535 292 aa13.46□□□□□ -0.25
RPS28-203ENST00000600659 MBNL2Q5VZF2 373 aaKnown RBP13.46□□□□□ -0.25
RPS28-203ENST00000600659 OR2T4Q8NH00 348 aa13.46□□□□□ -0.25
RPS28-203ENST00000600659 OR5K1Q8NHB7 308 aa13.46□□□□□ -0.25
RPS28-203ENST00000600659 ABHD4Q8TB40 342 aa13.46□□□□□ -0.25
RPS28-203ENST00000600659 KLF14Q8TD94 323 aaPredicted RBP13.46□□□□□ -0.25
RPS28-203ENST00000600659 MAP6Q96JE9 813 aa13.46□□□□□ -0.25
RPS28-203ENST00000600659 COQ7Q99807 217 aa13.46□□□□□ -0.25
RPS28-203ENST00000600659 WDR76Q9H967 626 aa13.46□□□□□ -0.25
RPS28-203ENST00000600659 TBCCD1Q9NVR7 557 aa13.46□□□□□ -0.25
RPS28-203ENST00000600659 TAAR3PQ9P1P4 343 aa13.46□□□□□ -0.25
RPS28-203ENST00000600659 AP4S1Q9Y587 144 aa13.46□□□□□ -0.25
RPS28-203ENST00000600659 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.46□□□□□ -0.254e-10■■■■□ 24.6
RPS28-203ENST00000600659 MALRD1Q5VYJ5 2156 aa13.46□□□□□ -0.25
RPS28-203ENST00000600659 TVP23AA6NH52 213 aa13.45□□□□□ -0.26
RPS28-203ENST00000600659 FAM183AA6NL82 134 aa13.45□□□□□ -0.26
RPS28-203ENST00000600659 H3BN98 237 aa13.45□□□□□ -0.26
RPS28-203ENST00000600659 ABHD16AO95870 558 aa13.45□□□□□ -0.26
RPS28-203ENST00000600659 HPXP02790 462 aa13.45□□□□□ -0.26
RPS28-203ENST00000600659 HEXAP06865 529 aa13.45□□□□□ -0.26
RPS28-203ENST00000600659 CSF3P09919 207 aa13.45□□□□□ -0.26
RPS28-203ENST00000600659 NAT2P11245 290 aa13.45□□□□□ -0.26
RPS28-203ENST00000600659 CENPAP49450 140 aa13.45□□□□□ -0.26
RPS28-203ENST00000600659 MMP15P51511 669 aa13.45□□□□□ -0.26
RPS28-203ENST00000600659 DSCR9P59020 149 aa13.45□□□□□ -0.26
RPS28-203ENST00000600659 PPP1CBP62140 327 aa13.45□□□□□ -0.26
RPS28-203ENST00000600659 PCK2Q16822 640 aa13.45□□□□□ -0.26
RPS28-203ENST00000600659 ALKBH6Q3KRA9 238 aa13.45□□□□□ -0.26
RPS28-203ENST00000600659 ELFN2Q5R3F8 820 aa13.45□□□□□ -0.26
RPS28-203ENST00000600659 SLC27A4Q6P1M0 643 aa13.45□□□□□ -0.26
RPS28-203ENST00000600659 CCDC121Q6ZUS5 278 aa13.45□□□□□ -0.26
RPS28-203ENST00000600659 AMIGO2Q86SJ2 522 aa13.45□□□□□ -0.26
RPS28-203ENST00000600659 ICA1LQ8NDH6 482 aa13.45□□□□□ -0.26
RPS28-203ENST00000600659 PROKR2Q8NFJ6 384 aa13.45□□□□□ -0.26
RPS28-203ENST00000600659 GJC3Q8NFK1 279 aa13.45□□□□□ -0.26
RPS28-203ENST00000600659 NEU4Q8WWR8 484 aaPredicted RBP13.45□□□□□ -0.26
RPS28-203ENST00000600659 LRTOMTQ8WZ04 291 aa13.45□□□□□ -0.26
RPS28-203ENST00000600659 FAM168AQ92567 244 aa13.45□□□□□ -0.26
RPS28-203ENST00000600659 PTP4A1Q93096 173 aa13.45□□□□□ -0.26
RPS28-203ENST00000600659 HDHD2Q9H0R4 259 aa13.45□□□□□ -0.26
RPS28-203ENST00000600659 GABARAPL1Q9H0R8 117 aa13.45□□□□□ -0.26
RPS28-203ENST00000600659 RAB1BQ9H0U4 201 aa13.45□□□□□ -0.26
RPS28-203ENST00000600659 MED20Q9H944 212 aa13.45□□□□□ -0.26
RPS28-203ENST00000600659 SLC25A19Q9HC21 320 aa13.45□□□□□ -0.26
RPS28-203ENST00000600659 POLR1DQ9Y2S0 133 aa13.45□□□□□ -0.26
RPS28-203ENST00000600659 A0A1W2PPW3 197 aa13.44□□□□□ -0.26
RPS28-203ENST00000600659 C17orf100A8MU93 164 aa13.44□□□□□ -0.26
RPS28-203ENST00000600659 H3BSA7 217 aa13.44□□□□□ -0.26
RPS28-203ENST00000600659 SURF4O15260 269 aa13.44□□□□□ -0.26
RPS28-203ENST00000600659 SLC25A16P16260 332 aa13.44□□□□□ -0.26
RPS28-203ENST00000600659 PDLIM4P50479 330 aa13.44□□□□□ -0.26
RPS28-203ENST00000600659 ACTR3P61158 418 aa13.44□□□□□ -0.26
RPS28-203ENST00000600659 GINS1Q14691 196 aa13.44□□□□□ -0.26
RPS28-203ENST00000600659 ZNF718Q3SXZ3 478 aa13.44□□□□□ -0.26
RPS28-203ENST00000600659 TMEM236Q5W0B7 351 aa13.44□□□□□ -0.26
RPS28-203ENST00000600659 CLEC9AQ6UXN8 241 aa13.44□□□□□ -0.26
RPS28-203ENST00000600659 COLCA1Q6ZS62 124 aa13.44□□□□□ -0.26
RPS28-203ENST00000600659 Q71RC1 249 aaPredicted RBP13.44□□□□□ -0.26
RPS28-203ENST00000600659 PARP8Q8N3A8 854 aa13.44□□□□□ -0.26
RPS28-203ENST00000600659 ATG16L2Q8NAA4 619 aa13.44□□□□□ -0.26
RPS28-203ENST00000600659 ZNF511Q8NB15 262 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms