RNA–Protein interactions for RNA: ENST00000600523.5

SRRM1-223, Transcript of serine and arginine repetitive matrix 1, human

TSL 5

Gene SRRM1, Length 575 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SRRM1-223	ENST00000600523	SLX4IP	Q5VYV7	408 aa		11.23	□□□□□ -0.61
SRRM1-223	ENST00000600523	SLC18B1	Q6NT16	456 aa		11.23	□□□□□ -0.61
SRRM1-223	ENST00000600523	TMEM154	Q6P9G4	183 aa		11.23	□□□□□ -0.61
SRRM1-223	ENST00000600523	ERI1	Q8IV48	349 aa	Known RBP	11.23	□□□□□ -0.61
SRRM1-223	ENST00000600523	LINC00346	Q8IVM7	164 aa		11.23	□□□□□ -0.61
SRRM1-223	ENST00000600523	GID4	Q8IVV7	300 aa		11.23	□□□□□ -0.61
SRRM1-223	ENST00000600523	OR1J1	Q8NGS3	322 aa		11.23	□□□□□ -0.61
SRRM1-223	ENST00000600523	ABHD4	Q8TB40	342 aa		11.23	□□□□□ -0.61
SRRM1-223	ENST00000600523	SYNPR	Q8TBG9	265 aa		11.23	□□□□□ -0.61
SRRM1-223	ENST00000600523	SNX33	Q8WV41	574 aa		11.23	□□□□□ -0.61
SRRM1-223	ENST00000600523	SPTSSA	Q969W0	71 aa		11.23	□□□□□ -0.61
SRRM1-223	ENST00000600523	MRPL24	Q96A35	216 aa	Known RBP	11.23	□□□□□ -0.61
SRRM1-223	ENST00000600523	C4orf45	Q96LM5	186 aa		11.23	□□□□□ -0.61
SRRM1-223	ENST00000600523	ATF6B	Q99941	703 aa		11.23	□□□□□ -0.61
SRRM1-223	ENST00000600523	RAB1B	Q9H0U4	201 aa		11.23	□□□□□ -0.61
SRRM1-223	ENST00000600523	OR51B6	Q9H340	312 aa		11.23	□□□□□ -0.61
SRRM1-223	ENST00000600523	MED20	Q9H944	212 aa		11.23	□□□□□ -0.61
SRRM1-223	ENST00000600523	ZNF701	Q9NV72	531 aa	Predicted RBP	11.23	□□□□□ -0.61
SRRM1-223	ENST00000600523	SLCO1C1	Q9NYB5	712 aa		11.23	□□□□□ -0.61
SRRM1-223	ENST00000600523	DUSP13	Q9UII6	198 aa		11.23	□□□□□ -0.61
SRRM1-223	ENST00000600523	GDF2	Q9UK05	429 aa	Predicted RBP	11.23	□□□□□ -0.61
SRRM1-223	ENST00000600523	GRIP1	Q9Y3R0	1128 aa		11.23	□□□□□ -0.61
SRRM1-223	ENST00000600523	LHFPL6	Q9Y693	200 aa		11.23	□□□□□ -0.61
SRRM1-223	ENST00000600523	COMMD3-BMI1	R4GMX3	469 aa		11.23	□□□□□ -0.61
SRRM1-223	ENST00000600523	NBPF19	A0A087WUL8	3843 aa		11.23	□□□□□ -0.61
SRRM1-223	ENST00000600523	LOC100509620	A0A075B734	347 aa		11.22	□□□□□ -0.61
SRRM1-223	ENST00000600523	SLC22A31	A6NKX4	558 aa		11.22	□□□□□ -0.61
SRRM1-223	ENST00000600523	SNTN	A6NMZ2	147 aa		11.22	□□□□□ -0.61
SRRM1-223	ENST00000600523		H3BSA7	217 aa		11.22	□□□□□ -0.61
SRRM1-223	ENST00000600523		J3QW42	95 aa		11.22	□□□□□ -0.61
SRRM1-223	ENST00000600523	SYNGR3	O43761	229 aa		11.22	□□□□□ -0.61
SRRM1-223	ENST00000600523	TLX2	O43763	284 aa	Predicted RBP	11.22	□□□□□ -0.61
SRRM1-223	ENST00000600523	CLU	P10909	449 aa		11.22	□□□□□ -0.61
SRRM1-223	ENST00000600523	PAX1	P15863	534 aa		11.22	□□□□□ -0.61
SRRM1-223	ENST00000600523	FBN2	P35556	2912 aa		11.22	□□□□□ -0.61
SRRM1-223	ENST00000600523	GGT2	P36268	569 aa		11.22	□□□□□ -0.61
SRRM1-223	ENST00000600523	CDKN1A	P38936	164 aa		11.22	□□□□□ -0.61
SRRM1-223	ENST00000600523	NUDT6	P53370	316 aa		11.22	□□□□□ -0.61
SRRM1-223	ENST00000600523	TPTE	P56180	551 aa		11.22	□□□□□ -0.61
SRRM1-223	ENST00000600523	KLF3	P57682	345 aa	Predicted RBP	11.22	□□□□□ -0.61
SRRM1-223	ENST00000600523	RCN1	Q15293	331 aa		11.22	□□□□□ -0.61
SRRM1-223	ENST00000600523	NKPD1	Q17RQ9	610 aa		11.22	□□□□□ -0.61
SRRM1-223	ENST00000600523	TEX30	Q5JUR7	227 aa		11.22	□□□□□ -0.61
SRRM1-223	ENST00000600523	OTP	Q5XKR4	325 aa		11.22	□□□□□ -0.61
SRRM1-223	ENST00000600523	CORO6	Q6QEF8	472 aa		11.22	□□□□□ -0.61
SRRM1-223	ENST00000600523	ZNF454	Q8N9F8	522 aa		11.22	□□□□□ -0.61
SRRM1-223	ENST00000600523	ZNF511	Q8NB15	262 aa		11.22	□□□□□ -0.61
SRRM1-223	ENST00000600523	OR6N2	Q8NGY6	317 aa		11.22	□□□□□ -0.61
SRRM1-223	ENST00000600523	PTP4A1	Q93096	173 aa		11.22	□□□□□ -0.61
SRRM1-223	ENST00000600523	SPG11	Q96JI7	2443 aa		11.22	□□□□□ -0.61
SRRM1-223	ENST00000600523	VRK1	Q99986	396 aa	Predicted RBP	11.22	□□□□□ -0.61
SRRM1-223	ENST00000600523	VCX	Q9H320	206 aa		11.22	□□□□□ -0.61
SRRM1-223	ENST00000600523	MS4A5	Q9H3V2	200 aa		11.22	□□□□□ -0.61
SRRM1-223	ENST00000600523	HINT3	Q9NQE9	182 aa	Known RBP	11.22	□□□□□ -0.61
SRRM1-223	ENST00000600523	TBCCD1	Q9NVR7	557 aa		11.22	□□□□□ -0.61
SRRM1-223	ENST00000600523	MRPL22	Q9NWU5	206 aa	Known RBP	11.22	□□□□□ -0.61
SRRM1-223	ENST00000600523	TMEFF2	Q9UIK5	374 aa	Predicted RBP	11.22	□□□□□ -0.61
SRRM1-223	ENST00000600523	CAD	P27708	2225 aa		11.21	□□□□□ -0.61
SRRM1-223	ENST00000600523	DSCAM	O60469	2012 aa		11.21	□□□□□ -0.61
SRRM1-223	ENST00000600523	PLSCR5	A0PG75	271 aa		11.21	□□□□□ -0.61
SRRM1-223	ENST00000600523	ANKRD65	E5RJM6	399 aa		11.21	□□□□□ -0.61
SRRM1-223	ENST00000600523		H7C417	338 aa		11.21	□□□□□ -0.61
SRRM1-223	ENST00000600523		M0R233	179 aa		11.21	□□□□□ -0.61
SRRM1-223	ENST00000600523	OVOL3	O00110	214 aa		11.21	□□□□□ -0.61
SRRM1-223	ENST00000600523	GPRIN2	O60269	458 aa		11.21	□□□□□ -0.61
SRRM1-223	ENST00000600523	APOC1	P02654	83 aa		11.21	□□□□□ -0.61
SRRM1-223	ENST00000600523	PPOX	P50336	477 aa		11.21	□□□□□ -0.61
SRRM1-223	ENST00000600523	PPP1CB	P62140	327 aa		11.21	□□□□□ -0.61
SRRM1-223	ENST00000600523	HIST1H3A	P68431	136 aa		11.21	□□□□□ -0.61
SRRM1-223	ENST00000600523	APOF	Q13790	326 aa		11.21	□□□□□ -0.61
SRRM1-223	ENST00000600523	EIF2B1	Q14232	305 aa	Known RBP	11.21	□□□□□ -0.61
SRRM1-223	ENST00000600523	CCDC92	Q53HC0	331 aa	Predicted RBP	11.21	□□□□□ -0.61
SRRM1-223	ENST00000600523	HIST2H3PS2	Q5TEC6	136 aa		11.21	□□□□□ -0.61
SRRM1-223	ENST00000600523	C12orf73	Q69YU5	71 aa		11.21	□□□□□ -0.61
SRRM1-223	ENST00000600523	PRSS57	Q6UWY2	283 aa		11.21	□□□□□ -0.61
SRRM1-223	ENST00000600523	HIST2H3A	Q71DI3	136 aa		11.21	□□□□□ -0.61
SRRM1-223	ENST00000600523	DCXR	Q7Z4W1	244 aa		11.21	□□□□□ -0.61
SRRM1-223	ENST00000600523	HIST2H2AB	Q8IUE6	130 aa	Predicted RBP	11.21	□□□□□ -0.61
SRRM1-223	ENST00000600523	PAQR4	Q8N4S7	273 aa	Predicted RBP	11.21	□□□□□ -0.61
SRRM1-223	ENST00000600523	TCEANC	Q8N8B7	351 aa		11.21	□□□□□ -0.61
SRRM1-223	ENST00000600523	OR8J1	Q8NGP2	316 aa		11.21	□□□□□ -0.61
SRRM1-223	ENST00000600523	TMEM163	Q8TC26	289 aa		11.21	□□□□□ -0.61
SRRM1-223	ENST00000600523	TRUB1	Q8WWH5	349 aa	Known RBP	11.21	□□□□□ -0.61
SRRM1-223	ENST00000600523	RFK	Q969G6	155 aa		11.21	□□□□□ -0.61
SRRM1-223	ENST00000600523	APOBEC3D	Q96AK3	386 aa	Predicted RBP	11.21	□□□□□ -0.61
SRRM1-223	ENST00000600523	ZMYND19	Q96E35	227 aa	Predicted RBP	11.21	□□□□□ -0.61
SRRM1-223	ENST00000600523	COPS4	Q9BT78	406 aa		11.21	□□□□□ -0.61
SRRM1-223	ENST00000600523	CXXC4	Q9H2H0	198 aa		11.21	□□□□□ -0.61
SRRM1-223	ENST00000600523	DCLRE1B	Q9H816	532 aa		11.21	□□□□□ -0.61
SRRM1-223	ENST00000600523	SP140L	Q9H930	580 aa		11.21	□□□□□ -0.61
SRRM1-223	ENST00000600523	WDR76	Q9H967	626 aa		11.21	□□□□□ -0.61
SRRM1-223	ENST00000600523	CENPM	Q9NSP4	180 aa		11.21	□□□□□ -0.61
SRRM1-223	ENST00000600523	POLQ	O75417	2590 aa		11.2	□□□□□ -0.62
SRRM1-223	ENST00000600523	RAI1	Q7Z5J4	1906 aa	Predicted RBP	11.2	□□□□□ -0.62
SRRM1-223	ENST00000600523	ZNF878	C9JN71	531 aa		11.2	□□□□□ -0.62
SRRM1-223	ENST00000600523		F5H5K5	113 aa		11.2	□□□□□ -0.62
SRRM1-223	ENST00000600523	PRKY	O43930	277 aa		11.2	□□□□□ -0.62
SRRM1-223	ENST00000600523	ICMT	O60725	284 aa		11.2	□□□□□ -0.62
SRRM1-223	ENST00000600523	CD8A	P01732	235 aa		11.2	□□□□□ -0.62
SRRM1-223	ENST00000600523	ANPEP	P15144	967 aa		11.2	□□□□□ -0.62

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