RNA–Protein interactions for RNA: ENST00000599342.5

VRK3-216, Transcript of vaccinia related kinase 3, humanhuman

TSL 3

Gene VRK3, Length 795 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-216ENST00000599342 SIGLEC7Q9Y286 467 aa8.3□□□□□ -1.08
VRK3-216ENST00000599342 NPTNQ9Y639 398 aa8.3□□□□□ -1.08
VRK3-216ENST00000599342 J3QW42 95 aa8.29□□□□□ -1.08
VRK3-216ENST00000599342 SURF4O15260 269 aa8.29□□□□□ -1.08
VRK3-216ENST00000599342 FOXH1O75593 365 aa8.29□□□□□ -1.08
VRK3-216ENST00000599342 AVPP01185 164 aa8.29□□□□□ -1.08
VRK3-216ENST00000599342 SBK2P0C263 348 aa8.29□□□□□ -1.08
VRK3-216ENST00000599342 ZNF26P17031 533 aaPredicted RBP8.29□□□□□ -1.08
VRK3-216ENST00000599342 ADRA2CP18825 462 aa8.29□□□□□ -1.08
VRK3-216ENST00000599342 KITLGP21583 273 aa8.29□□□□□ -1.08
VRK3-216ENST00000599342 LIMS1P48059 325 aa8.29□□□□□ -1.08
VRK3-216ENST00000599342 CENPAP49450 140 aa8.29□□□□□ -1.08
VRK3-216ENST00000599342 HILS1P60008 231 aa8.29□□□□□ -1.08
VRK3-216ENST00000599342 PSME3P61289 254 aa8.29□□□□□ -1.08
VRK3-216ENST00000599342 LSM6P62312 80 aaKnown RBP8.29□□□□□ -1.08
VRK3-216ENST00000599342 LCN2P80188 198 aa8.29□□□□□ -1.08
VRK3-216ENST00000599342 CDK5R2Q13319 367 aa8.29□□□□□ -1.08
VRK3-216ENST00000599342 GLYATQ6IB77 296 aa8.29□□□□□ -1.08
VRK3-216ENST00000599342 PGM2L1Q6PCE3 622 aa8.29□□□□□ -1.08
VRK3-216ENST00000599342 DPY19L2P2Q6ZN68 376 aa8.29□□□□□ -1.08
VRK3-216ENST00000599342 C1orf229Q6ZS94 237 aaPredicted RBP8.29□□□□□ -1.08
VRK3-216ENST00000599342 BPIFB2Q8N4F0 458 aa8.29□□□□□ -1.08
VRK3-216ENST00000599342 SPICQ8N5J4 248 aa8.29□□□□□ -1.08
VRK3-216ENST00000599342 OR5L1Q8NGL2 311 aa8.29□□□□□ -1.08
VRK3-216ENST00000599342 CMBLQ96DG6 245 aa8.29□□□□□ -1.08
VRK3-216ENST00000599342 SAMD8Q96LT4 415 aa8.29□□□□□ -1.08
VRK3-216ENST00000599342 DCLRE1CQ96SD1 692 aaKnown RBP8.29□□□□□ -1.08
VRK3-216ENST00000599342 GPX7Q96SL4 187 aaPredicted RBP8.29□□□□□ -1.08
VRK3-216ENST00000599342 RBM4Q9BWF3 364 aaKnown RBP8.29□□□□□ -1.08
VRK3-216ENST00000599342 POFUT1Q9H488 388 aa8.29□□□□□ -1.08
VRK3-216ENST00000599342 C7orf69Q9H7B7 122 aa8.29□□□□□ -1.08
VRK3-216ENST00000599342 NRIP3Q9NQ35 241 aa8.29□□□□□ -1.08
VRK3-216ENST00000599342 ADA2Q9NZK5 511 aa8.29□□□□□ -1.08
VRK3-216ENST00000599342 VSX1Q9NZR4 365 aaPredicted RBP8.29□□□□□ -1.08
VRK3-216ENST00000599342 NDUFAF4Q9P032 175 aa8.29□□□□□ -1.08
VRK3-216ENST00000599342 ABCD2Q9UBJ2 740 aa8.29□□□□□ -1.08
VRK3-216ENST00000599342 IL19Q9UHD0 177 aa8.29□□□□□ -1.08
VRK3-216ENST00000599342 IL20RAQ9UHF4 553 aa8.29□□□□□ -1.08
VRK3-216ENST00000599342 ATPIF1Q9UII2 106 aa8.29□□□□□ -1.08
VRK3-216ENST00000599342 COA3Q9Y2R0 106 aaPredicted RBP8.29□□□□□ -1.08
VRK3-216ENST00000599342 IER3IP1Q9Y5U9 82 aa8.29□□□□□ -1.08
VRK3-216ENST00000599342 TRBV4-1A0A0J9YWV2 114 aa8.28□□□□□ -1.08
VRK3-216ENST00000599342 OR6C6A6NF89 314 aa8.28□□□□□ -1.08
VRK3-216ENST00000599342 UNC119BA6NIH7 251 aa8.28□□□□□ -1.08
VRK3-216ENST00000599342 PTP4A3O75365 173 aa8.28□□□□□ -1.08
VRK3-216ENST00000599342 IGHV2-70P01814 119 aa8.28□□□□□ -1.08
VRK3-216ENST00000599342 FPR2P25090 351 aa8.28□□□□□ -1.08
VRK3-216ENST00000599342 CRABP1P29762 137 aa8.28□□□□□ -1.08
VRK3-216ENST00000599342 OMPP47874 163 aa8.28□□□□□ -1.08
VRK3-216ENST00000599342 RGS6P49758 472 aa8.28□□□□□ -1.08
VRK3-216ENST00000599342 SMIM11AP58511 58 aa8.28□□□□□ -1.08
VRK3-216ENST00000599342 BTG1P62324 171 aa8.28□□□□□ -1.08
VRK3-216ENST00000599342 SPIBQ01892 262 aa8.28□□□□□ -1.08
VRK3-216ENST00000599342 SPRNQ5BIV9 151 aa8.28□□□□□ -1.08
VRK3-216ENST00000599342 OTPQ5XKR4 325 aa8.28□□□□□ -1.08
VRK3-216ENST00000599342 SMARCD3Q6STE5 483 aa8.28□□□□□ -1.08
VRK3-216ENST00000599342 TSEN54Q7Z6J9 526 aaKnown RBP8.28□□□□□ -1.08
VRK3-216ENST00000599342 ZSCAN2Q7Z7L9 614 aaPredicted RBP8.28□□□□□ -1.08
VRK3-216ENST00000599342 JAZF1Q86VZ6 243 aa8.28□□□□□ -1.08
VRK3-216ENST00000599342 OR5AS1Q8N127 324 aa8.28□□□□□ -1.08
VRK3-216ENST00000599342 GJC3Q8NFK1 279 aa8.28□□□□□ -1.08
VRK3-216ENST00000599342 OR52J3Q8NH60 311 aa8.28□□□□□ -1.08
VRK3-216ENST00000599342 OR1F12Q8NHA8 337 aa8.28□□□□□ -1.08
VRK3-216ENST00000599342 FANK1Q8TC84 345 aa8.28□□□□□ -1.08
VRK3-216ENST00000599342 ITLN1Q8WWA0 313 aa8.28□□□□□ -1.08
VRK3-216ENST00000599342 SLC7A6Q92536 515 aa8.28□□□□□ -1.08
VRK3-216ENST00000599342 GCDHQ92947 438 aaPredicted RBP8.28□□□□□ -1.08
VRK3-216ENST00000599342 PTP4A1Q93096 173 aa8.28□□□□□ -1.08
VRK3-216ENST00000599342 HAVCR1Q96D42 359 aa8.28□□□□□ -1.08
VRK3-216ENST00000599342 OR2V2Q96R30 315 aa8.28□□□□□ -1.08
VRK3-216ENST00000599342 ELAC2Q9BQ52 826 aaKnown RBP8.28□□□□□ -1.08
VRK3-216ENST00000599342 NUAK2Q9H093 628 aa8.28□□□□□ -1.08
VRK3-216ENST00000599342 NSRP1Q9H0G5 558 aaKnown RBP8.28□□□□□ -1.08
VRK3-216ENST00000599342 DCAF13Q9NV06 445 aaKnown RBP8.28□□□□□ -1.08
VRK3-216ENST00000599342 PPP1R3CQ9UQK1 317 aa8.28□□□□□ -1.08
VRK3-216ENST00000599342 STARD10Q9Y365 291 aa8.28□□□□□ -1.08
VRK3-216ENST00000599342 V9GYQ6 96 aa8.28□□□□□ -1.08
VRK3-216ENST00000599342 STAB1Q9NY15 2570 aa8.27□□□□□ -1.08
VRK3-216ENST00000599342 PPIAL4EA0A075B759 164 aa8.27□□□□□ -1.09
VRK3-216ENST00000599342 PPIAL4CA0A0B4J2A2 164 aa8.27□□□□□ -1.09
VRK3-216ENST00000599342 PPIAL4DF5H284 164 aa8.27□□□□□ -1.09
VRK3-216ENST00000599342 RER1O15258 196 aa8.27□□□□□ -1.09
VRK3-216ENST00000599342 DIRAS1O95057 198 aa8.27□□□□□ -1.09
VRK3-216ENST00000599342 GADD45GO95257 159 aa8.27□□□□□ -1.09
VRK3-216ENST00000599342 PPP1R3DO95685 299 aa8.27□□□□□ -1.09
VRK3-216ENST00000599342 RENP00797 406 aa8.27□□□□□ -1.09
VRK3-216ENST00000599342 DBHP09172 617 aa8.27□□□□□ -1.09
VRK3-216ENST00000599342 PPIAL4FP0DN26 164 aa8.27□□□□□ -1.09
VRK3-216ENST00000599342 RAC2P15153 192 aa8.27□□□□□ -1.09
VRK3-216ENST00000599342 CFPP27918 469 aa8.27□□□□□ -1.09
VRK3-216ENST00000599342 NOS3P29474 1203 aa8.27□□□□□ -1.09
VRK3-216ENST00000599342 PRDX6P30041 224 aa8.27□□□□□ -1.09
VRK3-216ENST00000599342 SLC6A6P31641 620 aa8.27□□□□□ -1.09
VRK3-216ENST00000599342 SEC23BQ15437 767 aa8.27□□□□□ -1.09
VRK3-216ENST00000599342 TMEM155Q4W5P6 130 aa8.27□□□□□ -1.09
VRK3-216ENST00000599342 CCDC92Q53HC0 331 aaPredicted RBP8.27□□□□□ -1.09
VRK3-216ENST00000599342 ARMCX4Q5H9R4 360 aa8.27□□□□□ -1.09
VRK3-216ENST00000599342 SLC27A4Q6P1M0 643 aa8.27□□□□□ -1.09
VRK3-216ENST00000599342 LEG1Q6P5S2 330 aa8.27□□□□□ -1.09
VRK3-216ENST00000599342 Q6ZR03 302 aa8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms