RNA–Protein interactions for RNA: ENST00000598558.5

SHKBP1-217, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 579 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-217ENST00000598558 PRR23D1E9PI22 279 aaPredicted RBP12.21□□□□□ -0.45
SHKBP1-217ENST00000598558 ZNF593O00488 134 aaPredicted RBP12.21□□□□□ -0.45
SHKBP1-217ENST00000598558 GLCEO94923 617 aa12.21□□□□□ -0.45
SHKBP1-217ENST00000598558 IGHV4-39P01824 125 aa12.21□□□□□ -0.45
SHKBP1-217ENST00000598558 PRR23D2P0DMB1 279 aaPredicted RBP12.21□□□□□ -0.45
SHKBP1-217ENST00000598558 COX5BP10606 129 aa12.21□□□□□ -0.45
SHKBP1-217ENST00000598558 FMO3P31513 532 aa12.21□□□□□ -0.45
SHKBP1-217ENST00000598558 HTR5AP47898 357 aa12.21□□□□□ -0.45
SHKBP1-217ENST00000598558 EFNB3Q15768 340 aa12.21□□□□□ -0.45
SHKBP1-217ENST00000598558 KRTAP27-1Q3LI81 207 aa12.21□□□□□ -0.45
SHKBP1-217ENST00000598558 RFPL4BQ6ZWI9 263 aa12.21□□□□□ -0.45
SHKBP1-217ENST00000598558 NAA40Q86UY6 237 aa12.21□□□□□ -0.45
SHKBP1-217ENST00000598558 TIGD4Q8IY51 512 aa12.21□□□□□ -0.45
SHKBP1-217ENST00000598558 ALDH16A1Q8IZ83 802 aa12.21□□□□□ -0.45
SHKBP1-217ENST00000598558 TCEANCQ8N8B7 351 aa12.21□□□□□ -0.45
SHKBP1-217ENST00000598558 WFDC11Q8NEX6 87 aa12.21□□□□□ -0.45
SHKBP1-217ENST00000598558 OR10H5Q8NGA6 315 aa12.21□□□□□ -0.45
SHKBP1-217ENST00000598558 OR1J2Q8NGS2 313 aa12.21□□□□□ -0.45
SHKBP1-217ENST00000598558 OR6K6Q8NGW6 343 aa12.21□□□□□ -0.45
SHKBP1-217ENST00000598558 MRPL24Q96A35 216 aaKnown RBP12.21□□□□□ -0.45
SHKBP1-217ENST00000598558 MBOAT4Q96T53 435 aa12.21□□□□□ -0.45
SHKBP1-217ENST00000598558 AMELYQ99218 206 aa12.21□□□□□ -0.45
SHKBP1-217ENST00000598558 SYT3Q9BQG1 590 aa12.21□□□□□ -0.45
SHKBP1-217ENST00000598558 PLK3Q9H4B4 646 aa12.21□□□□□ -0.45
SHKBP1-217ENST00000598558 MARCH7Q9H992 704 aa12.21□□□□□ -0.45
SHKBP1-217ENST00000598558 POLR1DQ9Y2S0 133 aa12.21□□□□□ -0.45
SHKBP1-217ENST00000598558 ANKRD17O75179 2603 aaKnown RBP12.2□□□□□ -0.46
SHKBP1-217ENST00000598558 C5orf63A6NC05 138 aa12.2□□□□□ -0.46
SHKBP1-217ENST00000598558 DLGAP1O14490 977 aa12.2□□□□□ -0.46
SHKBP1-217ENST00000598558 TLX2O43763 284 aaPredicted RBP12.2□□□□□ -0.46
SHKBP1-217ENST00000598558 SELENOFO60613 162 aa12.2□□□□□ -0.46
SHKBP1-217ENST00000598558 ANPEPP15144 967 aa12.2□□□□□ -0.46
SHKBP1-217ENST00000598558 ZNF823P16415 610 aa12.2□□□□□ -0.46
SHKBP1-217ENST00000598558 PCSK6P29122 969 aa12.2□□□□□ -0.46
SHKBP1-217ENST00000598558 GSTT1P30711 240 aa12.2□□□□□ -0.46
SHKBP1-217ENST00000598558 MPV17P39210 176 aa12.2□□□□□ -0.46
SHKBP1-217ENST00000598558 ALDH3A2P51648 485 aa12.2□□□□□ -0.46
SHKBP1-217ENST00000598558 ADAM8P78325 824 aa12.2□□□□□ -0.46
SHKBP1-217ENST00000598558 GALK2Q01415 458 aa12.2□□□□□ -0.46
SHKBP1-217ENST00000598558 MAD2L1BPQ15013 274 aaPredicted RBP12.2□□□□□ -0.46
SHKBP1-217ENST00000598558 RAB35Q15286 201 aa12.2□□□□□ -0.46
SHKBP1-217ENST00000598558 TEX30Q5JUR7 227 aa12.2□□□□□ -0.46
SHKBP1-217ENST00000598558 ELFN2Q5R3F8 820 aa12.2□□□□□ -0.46
SHKBP1-217ENST00000598558 SPATA46Q5T0L3 261 aa12.2□□□□□ -0.46
SHKBP1-217ENST00000598558 AADACL4Q5VUY2 407 aa12.2□□□□□ -0.46
SHKBP1-217ENST00000598558 CXXC5Q7LFL8 322 aaKnown RBP12.2□□□□□ -0.46
SHKBP1-217ENST00000598558 LRRC75A-AS1Q8N1F1 130 aa12.2□□□□□ -0.46
SHKBP1-217ENST00000598558 GJC3Q8NFK1 279 aa12.2□□□□□ -0.46
SHKBP1-217ENST00000598558 MARS2Q96GW9 593 aaKnown RBP12.2□□□□□ -0.46
SHKBP1-217ENST00000598558 C4orf45Q96LM5 186 aa12.2□□□□□ -0.46
SHKBP1-217ENST00000598558 IL4I1Q96RQ9 567 aa12.2□□□□□ -0.46
SHKBP1-217ENST00000598558 CDADC1Q9BWV3 514 aa12.2□□□□□ -0.46
SHKBP1-217ENST00000598558 CXorf56Q9H5V9 222 aa12.2□□□□□ -0.46
SHKBP1-217ENST00000598558 FAIMQ9NVQ4 179 aa12.2□□□□□ -0.46
SHKBP1-217ENST00000598558 STARD10Q9Y365 291 aa12.2□□□□□ -0.46
SHKBP1-217ENST00000598558 CMAHPQ9Y471 501 aa12.2□□□□□ -0.46
SHKBP1-217ENST00000598558 B9A039 149 aa12.19□□□□□ -0.46
SHKBP1-217ENST00000598558 ICMTO60725 284 aa12.19□□□□□ -0.46
SHKBP1-217ENST00000598558 LY6HO94772 140 aa12.19□□□□□ -0.46
SHKBP1-217ENST00000598558 LCKP06239 509 aa12.19□□□□□ -0.46
SHKBP1-217ENST00000598558 SPARCP09486 303 aa12.19□□□□□ -0.46
SHKBP1-217ENST00000598558 ZNF250P15622 560 aa12.19□□□□□ -0.46
SHKBP1-217ENST00000598558 ENTPD1P49961 510 aa12.19□□□□□ -0.46
SHKBP1-217ENST00000598558 HCCSP53701 268 aa12.19□□□□□ -0.46
SHKBP1-217ENST00000598558 ATP5J2P56134 94 aa12.19□□□□□ -0.46
SHKBP1-217ENST00000598558 ELF3P78545 371 aaPredicted RBP12.19□□□□□ -0.46
SHKBP1-217ENST00000598558 APOFQ13790 326 aa12.19□□□□□ -0.46
SHKBP1-217ENST00000598558 RCN1Q15293 331 aa12.19□□□□□ -0.46
SHKBP1-217ENST00000598558 ALKBH6Q3KRA9 238 aa12.19□□□□□ -0.46
SHKBP1-217ENST00000598558 KLHL12Q53G59 568 aa12.19□□□□□ -0.46
SHKBP1-217ENST00000598558 DPY19L4Q7Z388 723 aa12.19□□□□□ -0.46
SHKBP1-217ENST00000598558 DCXRQ7Z4W1 244 aa12.19□□□□□ -0.46
SHKBP1-217ENST00000598558 OR1J1Q8NGS3 322 aa12.19□□□□□ -0.46
SHKBP1-217ENST00000598558 SLC25A40Q8TBP6 338 aa12.19□□□□□ -0.46
SHKBP1-217ENST00000598558 ST7LQ8TDW4 575 aa12.19□□□□□ -0.46
SHKBP1-217ENST00000598558 GTF3AQ92664 365 aaKnown RBP12.19□□□□□ -0.46
SHKBP1-217ENST00000598558 PLEKHA8Q96JA3 519 aa12.19□□□□□ -0.46
SHKBP1-217ENST00000598558 TEAD3Q99594 435 aa12.19□□□□□ -0.46
SHKBP1-217ENST00000598558 PITX2Q99697 317 aa12.19□□□□□ -0.46
SHKBP1-217ENST00000598558 COQ7Q99807 217 aa12.19□□□□□ -0.46
SHKBP1-217ENST00000598558 OR2J1Q9GZK6 312 aa12.19□□□□□ -0.46
SHKBP1-217ENST00000598558 KCNG2Q9UJ96 466 aa12.19□□□□□ -0.46
SHKBP1-217ENST00000598558 NDRG4Q9ULP0 352 aaKnown RBP12.19□□□□□ -0.46
SHKBP1-217ENST00000598558 KLHDC2Q9Y2U9 406 aa12.19□□□□□ -0.46
SHKBP1-217ENST00000598558 GRIP1Q9Y3R0 1128 aa12.19□□□□□ -0.46
SHKBP1-217ENST00000598558 SPEF1Q9Y4P9 236 aa12.19□□□□□ -0.46
SHKBP1-217ENST00000598558 MYO9AB2RTY4 2548 aa12.19□□□□□ -0.46
SHKBP1-217ENST00000598558 RTTNQ86VV8 2226 aa12.18□□□□□ -0.46
SHKBP1-217ENST00000598558 TMCC2O75069 709 aa12.18□□□□□ -0.46
SHKBP1-217ENST00000598558 PAICSP22234 425 aaKnown RBP12.18□□□□□ -0.46
SHKBP1-217ENST00000598558 RAD52P43351 418 aa12.18□□□□□ -0.46
SHKBP1-217ENST00000598558 ALDH3B1P43353 468 aa12.18□□□□□ -0.46
SHKBP1-217ENST00000598558 PPP1CBP62140 327 aa12.18□□□□□ -0.46
SHKBP1-217ENST00000598558 LPCAT4Q643R3 524 aa12.18□□□□□ -0.46
SHKBP1-217ENST00000598558 RGS7BPQ6MZT1 257 aaPredicted RBP12.18□□□□□ -0.46
SHKBP1-217ENST00000598558 SPNS3Q6ZMD2 512 aa12.18□□□□□ -0.46
SHKBP1-217ENST00000598558 ZBTB49Q6ZSB9 765 aa12.18□□□□□ -0.46
SHKBP1-217ENST00000598558 ERI1Q8IV48 349 aaKnown RBP12.18□□□□□ -0.46
SHKBP1-217ENST00000598558 OR2AJ1Q8NGZ0 328 aa12.18□□□□□ -0.46
SHKBP1-217ENST00000598558 ABHD4Q8TB40 342 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms