RNA–Protein interactions for RNA: ENST00000598209.5

UPF1-205, Transcript of UPF1, RNA helicase and ATPase, humanhuman

TSL 4

Gene UPF1, Length 551 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-205ENST00000598209 PPP1CBP62140 327 aa11.88□□□□□ -0.51
UPF1-205ENST00000598209 HIST1H3AP68431 136 aa11.88□□□□□ -0.51
UPF1-205ENST00000598209 SPATA46Q5T0L3 261 aa11.88□□□□□ -0.51
UPF1-205ENST00000598209 HIST2H3PS2Q5TEC6 136 aa11.88□□□□□ -0.51
UPF1-205ENST00000598209 SLC27A4Q6P1M0 643 aa11.88□□□□□ -0.51
UPF1-205ENST00000598209 ARL9Q6T311 187 aa11.88□□□□□ -0.51
UPF1-205ENST00000598209 HIST2H3AQ71DI3 136 aa11.88□□□□□ -0.51
UPF1-205ENST00000598209 BIVMQ86UB2 503 aa11.88□□□□□ -0.51
UPF1-205ENST00000598209 LINC00346Q8IVM7 164 aa11.88□□□□□ -0.51
UPF1-205ENST00000598209 OR51L1Q8NGJ5 315 aa11.88□□□□□ -0.51
UPF1-205ENST00000598209 OR1F12Q8NHA8 337 aa11.88□□□□□ -0.51
UPF1-205ENST00000598209 ABHD4Q8TB40 342 aa11.88□□□□□ -0.51
UPF1-205ENST00000598209 SLC25A40Q8TBP6 338 aa11.88□□□□□ -0.51
UPF1-205ENST00000598209 ZNRF4Q8WWF5 429 aa11.88□□□□□ -0.51
UPF1-205ENST00000598209 NEU4Q8WWR8 484 aaPredicted RBP11.88□□□□□ -0.51
UPF1-205ENST00000598209 SLC7A6Q92536 515 aa11.88□□□□□ -0.51
UPF1-205ENST00000598209 FAM168AQ92567 244 aa11.88□□□□□ -0.51
UPF1-205ENST00000598209 CDADC1Q9BWV3 514 aa11.88□□□□□ -0.51
UPF1-205ENST00000598209 REG4Q9BYZ8 158 aa11.88□□□□□ -0.51
UPF1-205ENST00000598209 NMNAT2Q9BZQ4 307 aa11.88□□□□□ -0.51
UPF1-205ENST00000598209 TPK1Q9H3S4 243 aa11.88□□□□□ -0.51
UPF1-205ENST00000598209 MS4A5Q9H3V2 200 aa11.88□□□□□ -0.51
UPF1-205ENST00000598209 ELOVL3Q9HB03 270 aa11.88□□□□□ -0.51
UPF1-205ENST00000598209 CMC2Q9NRP2 79 aa11.88□□□□□ -0.51
UPF1-205ENST00000598209 MRPL22Q9NWU5 206 aaKnown RBP11.88□□□□□ -0.51
UPF1-205ENST00000598209 TAAR3PQ9P1P4 343 aa11.88□□□□□ -0.51
UPF1-205ENST00000598209 KIF17Q9P2E2 1029 aa11.88□□□□□ -0.51
UPF1-205ENST00000598209 TVP23AA6NH52 213 aa11.87□□□□□ -0.51
UPF1-205ENST00000598209 GYPBP06028 91 aa11.87□□□□□ -0.51
UPF1-205ENST00000598209 CLUP10909 449 aa11.87□□□□□ -0.51
UPF1-205ENST00000598209 FCGR1AP12314 374 aa11.87□□□□□ -0.51
UPF1-205ENST00000598209 ZNF823P16415 610 aa11.87□□□□□ -0.51
UPF1-205ENST00000598209 SPI1P17947 270 aa11.87□□□□□ -0.51
UPF1-205ENST00000598209 GCH1P30793 250 aa11.87□□□□□ -0.51
UPF1-205ENST00000598209 GGT2P36268 569 aa11.87□□□□□ -0.51
UPF1-205ENST00000598209 PDLIM4P50479 330 aa11.87□□□□□ -0.51
UPF1-205ENST00000598209 DAPP51397 102 aa11.87□□□□□ -0.51
UPF1-205ENST00000598209 GINS1Q14691 196 aa11.87□□□□□ -0.51
UPF1-205ENST00000598209 NKPD1Q17RQ9 610 aa11.87□□□□□ -0.51
UPF1-205ENST00000598209 ALKBH6Q3KRA9 238 aa11.87□□□□□ -0.51
UPF1-205ENST00000598209 ZNF718Q3SXZ3 478 aa11.87□□□□□ -0.51
UPF1-205ENST00000598209 ELFN2Q5R3F8 820 aa11.87□□□□□ -0.51
UPF1-205ENST00000598209 SLC18B1Q6NT16 456 aa11.87□□□□□ -0.51
UPF1-205ENST00000598209 ACSM5Q6NUN0 579 aa11.87□□□□□ -0.51
UPF1-205ENST00000598209 FAHD1Q6P587 224 aa11.87□□□□□ -0.51
UPF1-205ENST00000598209 LYPD4Q6UWN0 246 aa11.87□□□□□ -0.51
UPF1-205ENST00000598209 CFAP77Q6ZQR2 320 aa11.87□□□□□ -0.51
UPF1-205ENST00000598209 AMIGO2Q86SJ2 522 aa11.87□□□□□ -0.51
UPF1-205ENST00000598209 C1orf174Q8IYL3 243 aa11.87□□□□□ -0.51
UPF1-205ENST00000598209 MAPK1IP1LQ8NDC0 245 aa11.87□□□□□ -0.51
UPF1-205ENST00000598209 OR2AJ1Q8NGZ0 328 aa11.87□□□□□ -0.51
UPF1-205ENST00000598209 C10orf105Q8TEF2 133 aa11.87□□□□□ -0.51
UPF1-205ENST00000598209 DNAJC9Q8WXX5 260 aa11.87□□□□□ -0.51
UPF1-205ENST00000598209 LRTOMTQ8WZ04 291 aa11.87□□□□□ -0.51
UPF1-205ENST00000598209 MARS2Q96GW9 593 aaKnown RBP11.87□□□□□ -0.51
UPF1-205ENST00000598209 OR2J1Q9GZK6 312 aa11.87□□□□□ -0.51
UPF1-205ENST00000598209 HDHD2Q9H0R4 259 aa11.87□□□□□ -0.51
UPF1-205ENST00000598209 PAPOLBQ9NRJ5 636 aaKnown RBP11.87□□□□□ -0.51
UPF1-205ENST00000598209 SLCO1C1Q9NYB5 712 aa11.87□□□□□ -0.51
UPF1-205ENST00000598209 CYB5R1Q9UHQ9 305 aa11.87□□□□□ -0.51
UPF1-205ENST00000598209 ATPIF1Q9UII2 106 aa11.87□□□□□ -0.51
UPF1-205ENST00000598209 GPR160Q9UJ42 338 aa11.87□□□□□ -0.51
UPF1-205ENST00000598209 KCNG2Q9UJ96 466 aa11.87□□□□□ -0.51
UPF1-205ENST00000598209 GRIP1Q9Y3R0 1128 aa11.87□□□□□ -0.51
UPF1-205ENST00000598209 FAM183AA6NL82 134 aa11.86□□□□□ -0.51
UPF1-205ENST00000598209 IGHV3-13P01766 116 aa11.86□□□□□ -0.51
UPF1-205ENST00000598209 DBHP09172 617 aa11.86□□□□□ -0.51
UPF1-205ENST00000598209 NAT2P11245 290 aa11.86□□□□□ -0.51
UPF1-205ENST00000598209 FMO3P31513 532 aa11.86□□□□□ -0.51
UPF1-205ENST00000598209 MPV17P39210 176 aa11.86□□□□□ -0.51
UPF1-205ENST00000598209 CDK5Q00535 292 aa11.86□□□□□ -0.51
UPF1-205ENST00000598209 KPNB1Q14974 876 aaKnown RBP11.86□□□□□ -0.51
UPF1-205ENST00000598209 CARTPTQ16568 116 aa11.86□□□□□ -0.51
UPF1-205ENST00000598209 MBNL2Q5VZF2 373 aaKnown RBP11.86□□□□□ -0.51
UPF1-205ENST00000598209 TMEM154Q6P9G4 183 aa11.86□□□□□ -0.51
UPF1-205ENST00000598209 CLEC9AQ6UXN8 241 aa11.86□□□□□ -0.51
UPF1-205ENST00000598209 HIPK1Q86Z02 1210 aa11.86□□□□□ -0.51
UPF1-205ENST00000598209 OR6K6Q8NGW6 343 aa11.86□□□□□ -0.51
UPF1-205ENST00000598209 KLF14Q8TD94 323 aaPredicted RBP11.86□□□□□ -0.51
UPF1-205ENST00000598209 SNX33Q8WV41 574 aa11.86□□□□□ -0.51
UPF1-205ENST00000598209 IPCEF1Q8WWN9 437 aaPredicted RBP11.86□□□□□ -0.51
UPF1-205ENST00000598209 OTULINQ96BN8 352 aa11.86□□□□□ -0.51
UPF1-205ENST00000598209 PITX2Q99697 317 aa11.86□□□□□ -0.51
UPF1-205ENST00000598209 COQ7Q99807 217 aa11.86□□□□□ -0.51
UPF1-205ENST00000598209 MED20Q9H944 212 aa11.86□□□□□ -0.51
UPF1-205ENST00000598209 MYOZ1Q9NP98 299 aaPredicted RBP11.86□□□□□ -0.51
UPF1-205ENST00000598209 TBCCD1Q9NVR7 557 aa11.86□□□□□ -0.51
UPF1-205ENST00000598209 G3V2T6 193 aa11.85□□□□□ -0.51
UPF1-205ENST00000598209 H3BSA7 217 aa11.85□□□□□ -0.51
UPF1-205ENST00000598209 SURF4O15260 269 aa11.85□□□□□ -0.51
UPF1-205ENST00000598209 LY6G6DO95868 133 aa11.85□□□□□ -0.51
UPF1-205ENST00000598209 HMGN1P05114 100 aa11.85□□□□□ -0.51
UPF1-205ENST00000598209 DAOP14920 347 aa11.85□□□□□ -0.51
UPF1-205ENST00000598209 SLC25A16P16260 332 aa11.85□□□□□ -0.51
UPF1-205ENST00000598209 ZNF23P17027 643 aa11.85□□□□□ -0.51
UPF1-205ENST00000598209 PAICSP22234 425 aaKnown RBP11.85□□□□□ -0.51
UPF1-205ENST00000598209 RPS27P42677 84 aaKnown RBP11.85□□□□□ -0.51
UPF1-205ENST00000598209 ACTR3P61158 418 aa11.85□□□□□ -0.51
UPF1-205ENST00000598209 MOGQ16653 247 aa11.85□□□□□ -0.51
UPF1-205ENST00000598209 TMEM255AQ5JRV8 349 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms