RNA–Protein interactions for RNA: ENST00000597325.1

SHKBP1-213, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 366 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-213ENST00000597325 ZNF837Q96EG3 531 aaPredicted RBP10.54□□□□□ -0.72
SHKBP1-213ENST00000597325 TBX5Q99593 518 aa10.54□□□□□ -0.72
SHKBP1-213ENST00000597325 ZNF696Q9H7X3 374 aa10.54□□□□□ -0.72
SHKBP1-213ENST00000597325 SIAEQ9HAT2 523 aa10.54□□□□□ -0.72
SHKBP1-213ENST00000597325 FGF20Q9NP95 211 aaPredicted RBP10.54□□□□□ -0.72
SHKBP1-213ENST00000597325 INPP5EQ9NRR6 644 aa10.54□□□□□ -0.72
SHKBP1-213ENST00000597325 FKBP14Q9NWM8 211 aa10.54□□□□□ -0.72
SHKBP1-213ENST00000597325 MRPL22Q9NWU5 206 aaKnown RBP10.54□□□□□ -0.72
SHKBP1-213ENST00000597325 ERVK-18Q9QC07 812 aa10.54□□□□□ -0.72
SHKBP1-213ENST00000597325 LAMP5Q9UJQ1 280 aa10.54□□□□□ -0.72
SHKBP1-213ENST00000597325 DIMT1Q9UNQ2 313 aaKnown RBP10.54□□□□□ -0.72
SHKBP1-213ENST00000597325 EXOGQ9Y2C4 368 aaKnown RBP10.54□□□□□ -0.72
SHKBP1-213ENST00000597325 EXOSC1Q9Y3B2 195 aaKnown RBP10.54□□□□□ -0.72
SHKBP1-213ENST00000597325 MED12LQ86YW9 2145 aa10.54□□□□□ -0.72
SHKBP1-213ENST00000597325 A0A096LPE4 126 aa10.53□□□□□ -0.72
SHKBP1-213ENST00000597325 A0A1W2PPZ6 126 aa10.53□□□□□ -0.72
SHKBP1-213ENST00000597325 MAGEA13PA6NCF6 341 aa10.53□□□□□ -0.72
SHKBP1-213ENST00000597325 A6NNC1 897 aa10.53□□□□□ -0.72
SHKBP1-213ENST00000597325 MYL12BO14950 172 aa10.53□□□□□ -0.72
SHKBP1-213ENST00000597325 MRPS14O60783 128 aaKnown RBP10.53□□□□□ -0.72
SHKBP1-213ENST00000597325 RAD51DO75771 328 aa10.53□□□□□ -0.72
SHKBP1-213ENST00000597325 LYZL6O75951 148 aa10.53□□□□□ -0.72
SHKBP1-213ENST00000597325 LYNP07948 512 aa10.53□□□□□ -0.72
SHKBP1-213ENST00000597325 RPSAP08865 295 aaKnown RBP10.53□□□□□ -0.72
SHKBP1-213ENST00000597325 OR2T7P0C7T2 308 aa10.53□□□□□ -0.72
SHKBP1-213ENST00000597325 COX5AP20674 150 aa10.53□□□□□ -0.72
SHKBP1-213ENST00000597325 IL32P24001 234 aa10.53□□□□□ -0.72
SHKBP1-213ENST00000597325 CAPZA2P47755 286 aa10.53□□□□□ -0.72
SHKBP1-213ENST00000597325 AQP6Q13520 282 aa10.53□□□□□ -0.72
SHKBP1-213ENST00000597325 EIF2B1Q14232 305 aaKnown RBP10.53□□□□□ -0.72
SHKBP1-213ENST00000597325 SLC36A2Q495M3 483 aa10.53□□□□□ -0.72
SHKBP1-213ENST00000597325 TEX30Q5JUR7 227 aa10.53□□□□□ -0.72
SHKBP1-213ENST00000597325 FAM27BQ5VT28 67 aa10.53□□□□□ -0.72
SHKBP1-213ENST00000597325 OR7E24Q6IFN5 339 aa10.53□□□□□ -0.72
SHKBP1-213ENST00000597325 SLC18B1Q6NT16 456 aa10.53□□□□□ -0.72
SHKBP1-213ENST00000597325 ZNF773Q6PK81 442 aa10.53□□□□□ -0.72
SHKBP1-213ENST00000597325 ZNF627Q7L945 461 aa10.53□□□□□ -0.72
SHKBP1-213ENST00000597325 SLC16A14Q7RTX9 510 aa10.53□□□□□ -0.72
SHKBP1-213ENST00000597325 PRSS48Q7RTY5 328 aa10.53□□□□□ -0.72
SHKBP1-213ENST00000597325 DPY19L4Q7Z388 723 aa10.53□□□□□ -0.72
SHKBP1-213ENST00000597325 DPPA2Q7Z7J5 298 aa10.53□□□□□ -0.72
SHKBP1-213ENST00000597325 CXorf67Q86X51 503 aaPredicted RBP10.53□□□□□ -0.72
SHKBP1-213ENST00000597325 GABRG1Q8N1C3 465 aa10.53□□□□□ -0.72
SHKBP1-213ENST00000597325 SVOPQ8N4V2 548 aa10.53□□□□□ -0.72
SHKBP1-213ENST00000597325 RELL2Q8NC24 303 aaPredicted RBP10.53□□□□□ -0.72
SHKBP1-213ENST00000597325 C1orf162Q8NEQ5 155 aaPredicted RBP10.53□□□□□ -0.72
SHKBP1-213ENST00000597325 TSPAN14Q8NG11 270 aa10.53□□□□□ -0.72
SHKBP1-213ENST00000597325 OR2T27Q8NH04 317 aa10.53□□□□□ -0.72
SHKBP1-213ENST00000597325 ASB17Q8WXJ9 295 aa10.53□□□□□ -0.72
SHKBP1-213ENST00000597325 HTRA1Q92743 480 aa10.53□□□□□ -0.72
SHKBP1-213ENST00000597325 LRRC46Q96FV0 321 aa10.53□□□□□ -0.72
SHKBP1-213ENST00000597325 ZNF416Q9BWM5 594 aa10.53□□□□□ -0.72
SHKBP1-213ENST00000597325 DUSP21Q9H596 190 aa10.53□□□□□ -0.72
SHKBP1-213ENST00000597325 PLEKHF2Q9H8W4 249 aa10.53□□□□□ -0.72
SHKBP1-213ENST00000597325 VCX3AQ9NNX9 186 aa10.53□□□□□ -0.72
SHKBP1-213ENST00000597325 PAK1IP1Q9NWT1 392 aaPredicted RBP10.53□□□□□ -0.72
SHKBP1-213ENST00000597325 A0A087WXM4 84 aa10.52□□□□□ -0.73
SHKBP1-213ENST00000597325 A0A1W2PQL4 384 aaPredicted RBP10.52□□□□□ -0.73
SHKBP1-213ENST00000597325 A8MXE2 369 aa10.52□□□□□ -0.73
SHKBP1-213ENST00000597325 SMAD7O15105 426 aaKnown RBP10.52□□□□□ -0.73
SHKBP1-213ENST00000597325 KCNAB3O43448 404 aa10.52□□□□□ -0.73
SHKBP1-213ENST00000597325 IGHA1P01876 353 aa10.52□□□□□ -0.73
SHKBP1-213ENST00000597325 MT-ND2P03891 347 aa10.52□□□□□ -0.73
SHKBP1-213ENST00000597325 CST2P09228 141 aa10.52□□□□□ -0.73
SHKBP1-213ENST00000597325 CD53P19397 219 aa10.52□□□□□ -0.73
SHKBP1-213ENST00000597325 RPS27P42677 84 aaKnown RBP10.52□□□□□ -0.73
SHKBP1-213ENST00000597325 ASCL1P50553 236 aa10.52□□□□□ -0.73
SHKBP1-213ENST00000597325 CDH15P55291 814 aa10.52□□□□□ -0.73
SHKBP1-213ENST00000597325 FOXG1P55316 489 aaPredicted RBP10.52□□□□□ -0.73
SHKBP1-213ENST00000597325 UBE2NP61088 152 aaKnown RBP10.52□□□□□ -0.73
SHKBP1-213ENST00000597325 ACTA2P62736 377 aa10.52□□□□□ -0.73
SHKBP1-213ENST00000597325 ACTG2P63267 376 aa10.52□□□□□ -0.73
SHKBP1-213ENST00000597325 SCRN3Q0VDG4 424 aa10.52□□□□□ -0.73
SHKBP1-213ENST00000597325 ENDOGQ14249 297 aaKnown RBP10.52□□□□□ -0.73
SHKBP1-213ENST00000597325 OTPQ5XKR4 325 aa10.52□□□□□ -0.73
SHKBP1-213ENST00000597325 ZNF474Q6S9Z5 364 aaPredicted RBP10.52□□□□□ -0.73
SHKBP1-213ENST00000597325 BHLHA15Q7RTS1 189 aaPredicted RBP10.52□□□□□ -0.73
SHKBP1-213ENST00000597325 FAM220AQ7Z4H9 259 aa10.52□□□□□ -0.73
SHKBP1-213ENST00000597325 LINC00346Q8IVM7 164 aa10.52□□□□□ -0.73
SHKBP1-213ENST00000597325 C17orf78Q8N4C9 275 aa10.52□□□□□ -0.73
SHKBP1-213ENST00000597325 ZNF433Q8N7K0 673 aaPredicted RBP10.52□□□□□ -0.73
SHKBP1-213ENST00000597325 OTOSQ8NHW6 89 aa10.52□□□□□ -0.73
SHKBP1-213ENST00000597325 THEM6Q8WUY1 208 aa10.52□□□□□ -0.73
SHKBP1-213ENST00000597325 SH3GL3Q99963 347 aa10.52□□□□□ -0.73
SHKBP1-213ENST00000597325 JAM3Q9BX67 310 aa10.52□□□□□ -0.73
SHKBP1-213ENST00000597325 HDHD5Q9BXW7 423 aa10.52□□□□□ -0.73
SHKBP1-213ENST00000597325 C1orf198Q9H425 327 aa10.52□□□□□ -0.73
SHKBP1-213ENST00000597325 BEX4Q9NWD9 120 aaPredicted RBP10.52□□□□□ -0.73
SHKBP1-213ENST00000597325 ELOVL5Q9NYP7 299 aa10.52□□□□□ -0.73
SHKBP1-213ENST00000597325 CRIM1Q9NZV1 1036 aa10.52□□□□□ -0.73
SHKBP1-213ENST00000597325 ASH2LQ9UBL3 628 aa10.52□□□□□ -0.73
SHKBP1-213ENST00000597325 GDF2Q9UK05 429 aaPredicted RBP10.52□□□□□ -0.73
SHKBP1-213ENST00000597325 ERGIC3Q9Y282 383 aa10.52□□□□□ -0.73
SHKBP1-213ENST00000597325 ARID1AO14497 2285 aa10.51□□□□□ -0.73
SHKBP1-213ENST00000597325 J3QRE1 110 aa10.51□□□□□ -0.73
SHKBP1-213ENST00000597325 HAX1O00165 279 aa10.51□□□□□ -0.73
SHKBP1-213ENST00000597325 UBL3O95164 117 aa10.51□□□□□ -0.73
SHKBP1-213ENST00000597325 SCG5P05408 212 aa10.51□□□□□ -0.73
SHKBP1-213ENST00000597325 CD79AP11912 226 aa10.51□□□□□ -0.73
SHKBP1-213ENST00000597325 PIGFQ07326 219 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms