RNA–Protein interactions for RNA: ENST00000597172.5

TRIM28-208, Transcript of tripartite motif containing 28, humanhuman

TSL 2

Gene TRIM28, Length 577 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-208ENST00000597172 STX19Q8N4C7 294 aa8.24□□□□□ -1.09
TRIM28-208ENST00000597172 SLC22A24Q8N4F4 322 aa8.24□□□□□ -1.09
TRIM28-208ENST00000597172 RFLNBQ8N5W9 214 aa8.24□□□□□ -1.09
TRIM28-208ENST00000597172 ZNF433Q8N7K0 673 aaPredicted RBP8.24□□□□□ -1.09
TRIM28-208ENST00000597172 RELL2Q8NC24 303 aaPredicted RBP8.24□□□□□ -1.09
TRIM28-208ENST00000597172 FGFBP3Q8TAT2 258 aa8.24□□□□□ -1.09
TRIM28-208ENST00000597172 BCL2L2Q92843 193 aaPredicted RBP8.24□□□□□ -1.09
TRIM28-208ENST00000597172 MYDGFQ969H8 173 aa8.24□□□□□ -1.09
TRIM28-208ENST00000597172 FBXO17Q96EF6 278 aa8.24□□□□□ -1.09
TRIM28-208ENST00000597172 INTS14Q96SY0 518 aa8.24□□□□□ -1.09
TRIM28-208ENST00000597172 AMELYQ99218 206 aa8.24□□□□□ -1.09
TRIM28-208ENST00000597172 CNN2Q99439 309 aaKnown RBP8.24□□□□□ -1.09
TRIM28-208ENST00000597172 FOXB1Q99853 325 aa8.24□□□□□ -1.09
TRIM28-208ENST00000597172 SH3GL3Q99963 347 aa8.24□□□□□ -1.09
TRIM28-208ENST00000597172 C19orf24Q9BVV8 132 aa8.24□□□□□ -1.09
TRIM28-208ENST00000597172 ZNF416Q9BWM5 594 aa8.24□□□□□ -1.09
TRIM28-208ENST00000597172 YIPF3Q9GZM5 350 aa8.24□□□□□ -1.09
TRIM28-208ENST00000597172 SIAEQ9HAT2 523 aa8.24□□□□□ -1.09
TRIM28-208ENST00000597172 TAS2R16Q9NYV7 291 aa8.24□□□□□ -1.09
TRIM28-208ENST00000597172 ZNF224Q9NZL3 707 aa8.24□□□□□ -1.09
TRIM28-208ENST00000597172 CLEC2DQ9UHP7 191 aa8.24□□□□□ -1.09
TRIM28-208ENST00000597172 CYB5R1Q9UHQ9 305 aa8.24□□□□□ -1.09
TRIM28-208ENST00000597172 DIMT1Q9UNQ2 313 aaKnown RBP8.24□□□□□ -1.09
TRIM28-208ENST00000597172 KLHDC2Q9Y2U9 406 aa8.24□□□□□ -1.09
TRIM28-208ENST00000597172 PHF3Q92576 2039 aaKnown RBP8.24□□□□□ -1.09
TRIM28-208ENST00000597172 FREM1Q5H8C1 2179 aa8.23□□□□□ -1.09
TRIM28-208ENST00000597172 A0A096LPE4 126 aa8.23□□□□□ -1.09
TRIM28-208ENST00000597172 A0A0G2JK05 382 aa8.23□□□□□ -1.09
TRIM28-208ENST00000597172 A0A1W2PPZ6 126 aa8.23□□□□□ -1.09
TRIM28-208ENST00000597172 A0A1W2PQL4 384 aaPredicted RBP8.23□□□□□ -1.09
TRIM28-208ENST00000597172 MAGEA13PA6NCF6 341 aa8.23□□□□□ -1.09
TRIM28-208ENST00000597172 TRIM64CA6NLI5 447 aa8.23□□□□□ -1.09
TRIM28-208ENST00000597172 C12orf71A8MTZ7 269 aa8.23□□□□□ -1.09
TRIM28-208ENST00000597172 PRR32B1ATL7 298 aa8.23□□□□□ -1.09
TRIM28-208ENST00000597172 RGS10O43665 173 aa8.23□□□□□ -1.09
TRIM28-208ENST00000597172 RAB36O95755 333 aa8.23□□□□□ -1.09
TRIM28-208ENST00000597172 FADS2O95864 444 aaKnown RBP8.23□□□□□ -1.09
TRIM28-208ENST00000597172 OR2T7P0C7T2 308 aa8.23□□□□□ -1.09
TRIM28-208ENST00000597172 PATE4P0C8F1 98 aa8.23□□□□□ -1.09
TRIM28-208ENST00000597172 LIMS3P0CW19 117 aa8.23□□□□□ -1.09
TRIM28-208ENST00000597172 LIMS4P0CW20 117 aa8.23□□□□□ -1.09
TRIM28-208ENST00000597172 B4GALT1P15291 398 aa8.23□□□□□ -1.09
TRIM28-208ENST00000597172 ZNF823P16415 610 aa8.23□□□□□ -1.09
TRIM28-208ENST00000597172 CD53P19397 219 aa8.23□□□□□ -1.09
TRIM28-208ENST00000597172 ALOX5APP20292 161 aa8.23□□□□□ -1.09
TRIM28-208ENST00000597172 NPR2P20594 1047 aa8.23□□□□□ -1.09
TRIM28-208ENST00000597172 COX5AP20674 150 aa8.23□□□□□ -1.09
TRIM28-208ENST00000597172 MSR1P21757 451 aa8.23□□□□□ -1.09
TRIM28-208ENST00000597172 EEF1B2P24534 225 aaKnown RBP8.23□□□□□ -1.09
TRIM28-208ENST00000597172 ATP6V1E1P36543 226 aa8.23□□□□□ -1.09
TRIM28-208ENST00000597172 ZNF85Q03923 595 aa8.23□□□□□ -1.09
TRIM28-208ENST00000597172 DOC2BQ14184 412 aa8.23□□□□□ -1.09
TRIM28-208ENST00000597172 TSC22D1Q15714 1073 aa8.23□□□□□ -1.09
TRIM28-208ENST00000597172 GABRA6Q16445 453 aa8.23□□□□□ -1.09
TRIM28-208ENST00000597172 NRN1LQ496H8 165 aa8.23□□□□□ -1.09
TRIM28-208ENST00000597172 ZNF684Q5T5D7 378 aa8.23□□□□□ -1.09
TRIM28-208ENST00000597172 RNLSQ5VYX0 342 aa8.23□□□□□ -1.09
TRIM28-208ENST00000597172 HIST2H2BDQ6DRA6 164 aa8.23□□□□□ -1.09
TRIM28-208ENST00000597172 SLC18B1Q6NT16 456 aa8.23□□□□□ -1.09
TRIM28-208ENST00000597172 CORO6Q6QEF8 472 aa8.23□□□□□ -1.09
TRIM28-208ENST00000597172 KLHL24Q6TFL4 600 aa8.23□□□□□ -1.09
TRIM28-208ENST00000597172 ZNF813Q6ZN06 617 aa8.23□□□□□ -1.09
TRIM28-208ENST00000597172 BEND4Q6ZU67 534 aa8.23□□□□□ -1.09
TRIM28-208ENST00000597172 SSX6Q7RTT6 188 aa8.23□□□□□ -1.09
TRIM28-208ENST00000597172 PRSS48Q7RTY5 328 aa8.23□□□□□ -1.09
TRIM28-208ENST00000597172 ABHD12BQ7Z5M8 362 aaPredicted RBP8.23□□□□□ -1.09
TRIM28-208ENST00000597172 LUZP2Q86TE4 346 aa8.23□□□□□ -1.09
TRIM28-208ENST00000597172 LHFPL3Q86UP9 236 aa8.23□□□□□ -1.09
TRIM28-208ENST00000597172 CXorf67Q86X51 503 aaPredicted RBP8.23□□□□□ -1.09
TRIM28-208ENST00000597172 SPARTQ8N0X7 666 aa8.23□□□□□ -1.09
TRIM28-208ENST00000597172 LRRC18Q8N456 261 aa8.23□□□□□ -1.09
TRIM28-208ENST00000597172 TSPAN14Q8NG11 270 aa8.23□□□□□ -1.09
TRIM28-208ENST00000597172 OR10H4Q8NGA5 316 aa8.23□□□□□ -1.09
TRIM28-208ENST00000597172 OR1K1Q8NGR3 316 aa8.23□□□□□ -1.09
TRIM28-208ENST00000597172 OR6N2Q8NGY6 317 aa8.23□□□□□ -1.09
TRIM28-208ENST00000597172 OR2T27Q8NH04 317 aa8.23□□□□□ -1.09
TRIM28-208ENST00000597172 OTOSQ8NHW6 89 aa8.23□□□□□ -1.09
TRIM28-208ENST00000597172 BOD1Q96IK1 185 aa8.23□□□□□ -1.09
TRIM28-208ENST00000597172 TBX5Q99593 518 aa8.23□□□□□ -1.09
TRIM28-208ENST00000597172 JAM3Q9BX67 310 aa8.23□□□□□ -1.09
TRIM28-208ENST00000597172 CDCA4Q9BXL8 241 aa8.23□□□□□ -1.09
TRIM28-208ENST00000597172 PIGMQ9H3S5 423 aa8.23□□□□□ -1.09
TRIM28-208ENST00000597172 ERVK13-1Q9NX77 482 aa8.23□□□□□ -1.09
TRIM28-208ENST00000597172 CRIM1Q9NZV1 1036 aa8.23□□□□□ -1.09
TRIM28-208ENST00000597172 KCNG2Q9UJ96 466 aa8.23□□□□□ -1.09
TRIM28-208ENST00000597172 BLOC1S6Q9UL45 172 aa8.23□□□□□ -1.09
TRIM28-208ENST00000597172 PCDHGB1Q9Y5G3 927 aa8.23□□□□□ -1.09
TRIM28-208ENST00000597172 LHFPL6Q9Y693 200 aa8.23□□□□□ -1.09
TRIM28-208ENST00000597172 DAPL1A0PJW8 107 aa8.22□□□□□ -1.09
TRIM28-208ENST00000597172 IRGMA1A4Y4 181 aa8.22□□□□□ -1.09
TRIM28-208ENST00000597172 ZNF503-AS2A6NEH8 195 aa8.22□□□□□ -1.09
TRIM28-208ENST00000597172 DVL2O14641 736 aa8.22□□□□□ -1.09
TRIM28-208ENST00000597172 MAGEB4O15481 346 aaPredicted RBP8.22□□□□□ -1.09
TRIM28-208ENST00000597172 MRPS14O60783 128 aaKnown RBP8.22□□□□□ -1.09
TRIM28-208ENST00000597172 LYZL6O75951 148 aa8.22□□□□□ -1.09
TRIM28-208ENST00000597172 WNT11O96014 354 aa8.22□□□□□ -1.09
TRIM28-208ENST00000597172 CST2P09228 141 aa8.22□□□□□ -1.09
TRIM28-208ENST00000597172 SPARCP09486 303 aa8.22□□□□□ -1.09
TRIM28-208ENST00000597172 SMIM18P0DKX4 95 aa8.22□□□□□ -1.09
TRIM28-208ENST00000597172 OR8G3PP0DMU2 310 aa8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms