RNA–Protein interactions for RNA: ENST00000596163.5

SHKBP1-212, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 785 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-212ENST00000596163 COQ7Q99807 217 aa14.86□□□□□ -0.03
SHKBP1-212ENST00000596163 SYT3Q9BQG1 590 aa14.86□□□□□ -0.03
SHKBP1-212ENST00000596163 NMNAT2Q9BZQ4 307 aa14.86□□□□□ -0.03
SHKBP1-212ENST00000596163 MYOZ1Q9NP98 299 aaPredicted RBP14.86□□□□□ -0.03
SHKBP1-212ENST00000596163 TBCCD1Q9NVR7 557 aa14.86□□□□□ -0.03
SHKBP1-212ENST00000596163 LHFPL6Q9Y693 200 aa14.86□□□□□ -0.03
SHKBP1-212ENST00000596163 H3BSA7 217 aa14.85□□□□□ -0.03
SHKBP1-212ENST00000596163 RER1O15258 196 aa14.85□□□□□ -0.03
SHKBP1-212ENST00000596163 ABHD16AO95870 558 aa14.85□□□□□ -0.03
SHKBP1-212ENST00000596163 MT-ND5P03915 603 aa14.85□□□□□ -0.03
SHKBP1-212ENST00000596163 ADRA2AP08913 450 aa14.85□□□□□ -0.03
SHKBP1-212ENST00000596163 SPI1P17947 270 aa14.85□□□□□ -0.03
SHKBP1-212ENST00000596163 WNT5AP41221 380 aa14.85□□□□□ -0.03
SHKBP1-212ENST00000596163 RGS6P49758 472 aa14.85□□□□□ -0.03
SHKBP1-212ENST00000596163 DAPP51397 102 aa14.85□□□□□ -0.03
SHKBP1-212ENST00000596163 CRISP1P54107 249 aa14.85□□□□□ -0.03
SHKBP1-212ENST00000596163 CDK5Q00535 292 aa14.85□□□□□ -0.03
SHKBP1-212ENST00000596163 ELFN2Q5R3F8 820 aa14.85□□□□□ -0.03
SHKBP1-212ENST00000596163 ACSM5Q6NUN0 579 aa14.85□□□□□ -0.03
SHKBP1-212ENST00000596163 AMIGO2Q86SJ2 522 aa14.85□□□□□ -0.03
SHKBP1-212ENST00000596163 ABHD4Q8TB40 342 aa14.85□□□□□ -0.03
SHKBP1-212ENST00000596163 SNX33Q8WV41 574 aa14.85□□□□□ -0.03
SHKBP1-212ENST00000596163 OTULINQ96BN8 352 aa14.85□□□□□ -0.03
SHKBP1-212ENST00000596163 OSBPL10Q9BXB5 764 aa14.85□□□□□ -0.03
SHKBP1-212ENST00000596163 PRRG3Q9BZD7 231 aa14.85□□□□□ -0.03
SHKBP1-212ENST00000596163 GABARAPL1Q9H0R8 117 aa14.85□□□□□ -0.03
SHKBP1-212ENST00000596163 SLC25A19Q9HC21 320 aa14.85□□□□□ -0.03
SHKBP1-212ENST00000596163 KRT84Q9NSB2 600 aa14.85□□□□□ -0.03
SHKBP1-212ENST00000596163 CYB5R1Q9UHQ9 305 aa14.85□□□□□ -0.03
SHKBP1-212ENST00000596163 FZR1Q9UM11 496 aa14.85□□□□□ -0.03
SHKBP1-212ENST00000596163 GRIP1Q9Y3R0 1128 aa14.85□□□□□ -0.03
SHKBP1-212ENST00000596163 ITPR3Q14573 2671 aa14.85□□□□□ -0.03
SHKBP1-212ENST00000596163 IGLV3-9A0A075B6K5 115 aa14.84□□□□□ -0.03
SHKBP1-212ENST00000596163 PRR23D1E9PI22 279 aaPredicted RBP14.84□□□□□ -0.03
SHKBP1-212ENST00000596163 J3QW42 95 aa14.84□□□□□ -0.03
SHKBP1-212ENST00000596163 PRR23D2P0DMB1 279 aaPredicted RBP14.84□□□□□ -0.03
SHKBP1-212ENST00000596163 GGT2P36268 569 aa14.84□□□□□ -0.03
SHKBP1-212ENST00000596163 PPP1CBP62140 327 aa14.84□□□□□ -0.03
SHKBP1-212ENST00000596163 NKPD1Q17RQ9 610 aa14.84□□□□□ -0.03
SHKBP1-212ENST00000596163 MSMPQ1L6U9 139 aa14.84□□□□□ -0.03
SHKBP1-212ENST00000596163 OTPQ5XKR4 325 aa14.84□□□□□ -0.03
SHKBP1-212ENST00000596163 SLC18B1Q6NT16 456 aa14.84□□□□□ -0.03
SHKBP1-212ENST00000596163 LRP11Q86VZ4 500 aa14.84□□□□□ -0.03
SHKBP1-212ENST00000596163 ZNF101Q8IZC7 436 aa14.84□□□□□ -0.03
SHKBP1-212ENST00000596163 OR51L1Q8NGJ5 315 aa14.84□□□□□ -0.03
SHKBP1-212ENST00000596163 PYDC1Q8WXC3 89 aa14.84□□□□□ -0.03
SHKBP1-212ENST00000596163 SORCS2Q96PQ0 1159 aa14.84□□□□□ -0.03
SHKBP1-212ENST00000596163 PITX2Q99697 317 aa14.84□□□□□ -0.03
SHKBP1-212ENST00000596163 DLL4Q9NR61 685 aa14.84□□□□□ -0.03
SHKBP1-212ENST00000596163 MRPL22Q9NWU5 206 aaKnown RBP14.84□□□□□ -0.03
SHKBP1-212ENST00000596163 TAAR3PQ9P1P4 343 aa14.84□□□□□ -0.03
SHKBP1-212ENST00000596163 TRIM64A6NGJ6 449 aa14.83□□□□□ -0.04
SHKBP1-212ENST00000596163 TVP23AA6NH52 213 aa14.83□□□□□ -0.04
SHKBP1-212ENST00000596163 TRIM64BA6NI03 449 aa14.83□□□□□ -0.04
SHKBP1-212ENST00000596163 H7C1Q1 480 aa14.83□□□□□ -0.04
SHKBP1-212ENST00000596163 SURF4O15260 269 aa14.83□□□□□ -0.04
SHKBP1-212ENST00000596163 INHBBP09529 407 aa14.83□□□□□ -0.04
SHKBP1-212ENST00000596163 PDLIM4P50479 330 aa14.83□□□□□ -0.04
SHKBP1-212ENST00000596163 TNK1Q13470 666 aa14.83□□□□□ -0.04
SHKBP1-212ENST00000596163 MBNL2Q5VZF2 373 aaKnown RBP14.83□□□□□ -0.04
SHKBP1-212ENST00000596163 CORO6Q6QEF8 472 aa14.83□□□□□ -0.04
SHKBP1-212ENST00000596163 DNM1P46Q6ZS02 220 aa14.83□□□□□ -0.04
SHKBP1-212ENST00000596163 BIVMQ86UB2 503 aa14.83□□□□□ -0.04
SHKBP1-212ENST00000596163 LINC00346Q8IVM7 164 aa14.83□□□□□ -0.04
SHKBP1-212ENST00000596163 OR5L1Q8NGL2 311 aa14.83□□□□□ -0.04
SHKBP1-212ENST00000596163 OR6K6Q8NGW6 343 aa14.83□□□□□ -0.04
SHKBP1-212ENST00000596163 SLC25A40Q8TBP6 338 aa14.83□□□□□ -0.04
SHKBP1-212ENST00000596163 FAM168AQ92567 244 aa14.83□□□□□ -0.04
SHKBP1-212ENST00000596163 MARS2Q96GW9 593 aaKnown RBP14.83□□□□□ -0.04
SHKBP1-212ENST00000596163 SEMA6AQ9H2E6 1030 aa14.83□□□□□ -0.04
SHKBP1-212ENST00000596163 NDUFS8O00217 210 aa14.82□□□□□ -0.04
SHKBP1-212ENST00000596163 GLCEO94923 617 aa14.82□□□□□ -0.04
SHKBP1-212ENST00000596163 IGHV3-13P01766 116 aa14.82□□□□□ -0.04
SHKBP1-212ENST00000596163 GYPBP06028 91 aa14.82□□□□□ -0.04
SHKBP1-212ENST00000596163 SLC25A16P16260 332 aa14.82□□□□□ -0.04
SHKBP1-212ENST00000596163 LIPAP38571 399 aa14.82□□□□□ -0.04
SHKBP1-212ENST00000596163 ALDH3B1P43353 468 aa14.82□□□□□ -0.04
SHKBP1-212ENST00000596163 ENTPD1P49961 510 aa14.82□□□□□ -0.04
SHKBP1-212ENST00000596163 ERVS71-1P61550 626 aa14.82□□□□□ -0.04
SHKBP1-212ENST00000596163 SNAPC1Q16533 368 aa14.82□□□□□ -0.04
SHKBP1-212ENST00000596163 TEX30Q5JUR7 227 aa14.82□□□□□ -0.04
SHKBP1-212ENST00000596163 KDM4DQ6B0I6 523 aa14.82□□□□□ -0.04
SHKBP1-212ENST00000596163 TMEM154Q6P9G4 183 aa14.82□□□□□ -0.04
SHKBP1-212ENST00000596163 KLF14Q8TD94 323 aaPredicted RBP14.82□□□□□ -0.04
SHKBP1-212ENST00000596163 PTP4A1Q93096 173 aa14.82□□□□□ -0.04
SHKBP1-212ENST00000596163 COX4I2Q96KJ9 171 aa14.82□□□□□ -0.04
SHKBP1-212ENST00000596163 ATF6BQ99941 703 aa14.82□□□□□ -0.04
SHKBP1-212ENST00000596163 REG4Q9BYZ8 158 aa14.82□□□□□ -0.04
SHKBP1-212ENST00000596163 OR2J1Q9GZK6 312 aa14.82□□□□□ -0.04
SHKBP1-212ENST00000596163 OR51V1Q9H2C8 321 aa14.82□□□□□ -0.04
SHKBP1-212ENST00000596163 HINT3Q9NQE9 182 aaKnown RBP14.82□□□□□ -0.04
SHKBP1-212ENST00000596163 CYSLTR2Q9NS75 346 aa14.82□□□□□ -0.04
SHKBP1-212ENST00000596163 TVP23BQ9NYZ1 205 aa14.82□□□□□ -0.04
SHKBP1-212ENST00000596163 CGGBP1Q9UFW8 167 aaPredicted RBP14.82□□□□□ -0.04
SHKBP1-212ENST00000596163 HIVEP1P15822 2718 aa14.81□□□□□ -0.04
SHKBP1-212ENST00000596163 F8P00451 2351 aa14.81□□□□□ -0.04
SHKBP1-212ENST00000596163 PLSCR5A0PG75 271 aa14.81□□□□□ -0.04
SHKBP1-212ENST00000596163 FAM183AA6NL82 134 aa14.81□□□□□ -0.04
SHKBP1-212ENST00000596163 ZNF593O00488 134 aaPredicted RBP14.81□□□□□ -0.04
SHKBP1-212ENST00000596163 PRODHO43272 600 aa14.81□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms