RNA–Protein interactions for RNA: ENST00000596121.5

VRK3-210, Transcript of vaccinia related kinase 3, humanhuman

TSL 3

Gene VRK3, Length 983 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-210ENST00000596121 DNM1P34Q6PK57 102 aa9.55□□□□□ -0.88
VRK3-210ENST00000596121 CFAP77Q6ZQR2 320 aa9.55□□□□□ -0.88
VRK3-210ENST00000596121 ALDH16A1Q8IZ83 802 aa9.55□□□□□ -0.88
VRK3-210ENST00000596121 ATG16L2Q8NAA4 619 aa9.55□□□□□ -0.88
VRK3-210ENST00000596121 ZNF511Q8NB15 262 aa9.55□□□□□ -0.88
VRK3-210ENST00000596121 ICA1LQ8NDH6 482 aa9.55□□□□□ -0.88
VRK3-210ENST00000596121 OR10S1Q8NGN2 331 aa9.55□□□□□ -0.88
VRK3-210ENST00000596121 OR1J1Q8NGS3 322 aa9.55□□□□□ -0.88
VRK3-210ENST00000596121 OR1F12Q8NHA8 337 aa9.55□□□□□ -0.88
VRK3-210ENST00000596121 OR5K1Q8NHB7 308 aa9.55□□□□□ -0.88
VRK3-210ENST00000596121 SLC25A40Q8TBP6 338 aa9.55□□□□□ -0.88
VRK3-210ENST00000596121 TEX47Q8TBZ9 253 aa9.55□□□□□ -0.88
VRK3-210ENST00000596121 PYDC1Q8WXC3 89 aa9.55□□□□□ -0.88
VRK3-210ENST00000596121 MARS2Q96GW9 593 aaKnown RBP9.55□□□□□ -0.88
VRK3-210ENST00000596121 MAP6Q96JE9 813 aa9.55□□□□□ -0.88
VRK3-210ENST00000596121 C4orf45Q96LM5 186 aa9.55□□□□□ -0.88
VRK3-210ENST00000596121 WACQ9BTA9 647 aa9.55□□□□□ -0.88
VRK3-210ENST00000596121 WDR76Q9H967 626 aa9.55□□□□□ -0.88
VRK3-210ENST00000596121 BARX1Q9HBU1 254 aaPredicted RBP9.55□□□□□ -0.88
VRK3-210ENST00000596121 PNRC2Q9NPJ4 139 aaKnown RBP9.55□□□□□ -0.88
VRK3-210ENST00000596121 CMC2Q9NRP2 79 aa9.55□□□□□ -0.88
VRK3-210ENST00000596121 CYB5R1Q9UHQ9 305 aa9.55□□□□□ -0.88
VRK3-210ENST00000596121 DUSP13Q9UII6 198 aa9.55□□□□□ -0.88
VRK3-210ENST00000596121 KLHL21Q9UJP4 597 aa9.55□□□□□ -0.88
VRK3-210ENST00000596121 BAIAP2Q9UQB8 552 aa9.55□□□□□ -0.88
VRK3-210ENST00000596121 ZFHX3Q15911 3703 aa9.55□□□□□ -0.88
VRK3-210ENST00000596121 LYNX1G3V0Z9 82 aa9.54□□□□□ -0.88
VRK3-210ENST00000596121 CIB2O75838 187 aa9.54□□□□□ -0.88
VRK3-210ENST00000596121 LYNX1P0DP58 116 aa9.54□□□□□ -0.88
VRK3-210ENST00000596121 NAT2P11245 290 aa9.54□□□□□ -0.88
VRK3-210ENST00000596121 FASP25445 335 aa9.54□□□□□ -0.88
VRK3-210ENST00000596121 RAD52P43351 418 aa9.54□□□□□ -0.88
VRK3-210ENST00000596121 HTR5AP47898 357 aa9.54□□□□□ -0.88
VRK3-210ENST00000596121 SLC25A1P53007 311 aa9.54□□□□□ -0.88
VRK3-210ENST00000596121 RPS23P62266 143 aaKnown RBP9.54□□□□□ -0.88
VRK3-210ENST00000596121 GLO1Q04760 184 aa9.54□□□□□ -0.88
VRK3-210ENST00000596121 KRTAP1-1Q07627 177 aa9.54□□□□□ -0.88
VRK3-210ENST00000596121 TMEM154Q6P9G4 183 aa9.54□□□□□ -0.88
VRK3-210ENST00000596121 PROKR2Q8NFJ6 384 aa9.54□□□□□ -0.88
VRK3-210ENST00000596121 BBS1Q8NFJ9 593 aa9.54□□□□□ -0.88
VRK3-210ENST00000596121 OR2T4Q8NH00 348 aa9.54□□□□□ -0.88
VRK3-210ENST00000596121 ABHD4Q8TB40 342 aa9.54□□□□□ -0.88
VRK3-210ENST00000596121 SYNPRQ8TBG9 265 aa9.54□□□□□ -0.88
VRK3-210ENST00000596121 C10orf105Q8TEF2 133 aa9.54□□□□□ -0.88
VRK3-210ENST00000596121 PKP2Q99959 881 aa9.54□□□□□ -0.88
VRK3-210ENST00000596121 BDH2Q9BUT1 245 aa9.54□□□□□ -0.88
VRK3-210ENST00000596121 REG4Q9BYZ8 158 aa9.54□□□□□ -0.88
VRK3-210ENST00000596121 BCL2L14Q9BZR8 327 aa9.54□□□□□ -0.88
VRK3-210ENST00000596121 OR2J1Q9GZK6 312 aa9.54□□□□□ -0.88
VRK3-210ENST00000596121 SEMA6AQ9H2E6 1030 aa9.54□□□□□ -0.88
VRK3-210ENST00000596121 TPK1Q9H3S4 243 aa9.54□□□□□ -0.88
VRK3-210ENST00000596121 PLEK2Q9NYT0 353 aa9.54□□□□□ -0.88
VRK3-210ENST00000596121 TMEFF2Q9UIK5 374 aaPredicted RBP9.54□□□□□ -0.88
VRK3-210ENST00000596121 STARD10Q9Y365 291 aa9.54□□□□□ -0.88
VRK3-210ENST00000596121 GRIP1Q9Y3R0 1128 aa9.54□□□□□ -0.88
VRK3-210ENST00000596121 C5orf63A6NC05 138 aa9.53□□□□□ -0.88
VRK3-210ENST00000596121 RIIAD1A6NNX1 92 aa9.53□□□□□ -0.88
VRK3-210ENST00000596121 VSTM5A8MXK1 200 aa9.53□□□□□ -0.88
VRK3-210ENST00000596121 G3V2T6 193 aa9.53□□□□□ -0.88
VRK3-210ENST00000596121 M0R233 179 aa9.53□□□□□ -0.88
VRK3-210ENST00000596121 SURF4O15260 269 aa9.53□□□□□ -0.88
VRK3-210ENST00000596121 NCR1O76036 304 aa9.53□□□□□ -0.88
VRK3-210ENST00000596121 LY6G6DO95868 133 aa9.53□□□□□ -0.88
VRK3-210ENST00000596121 HLA-DQA2P01906 255 aa9.53□□□□□ -0.88
VRK3-210ENST00000596121 BMP4P12644 408 aa9.53□□□□□ -0.88
VRK3-210ENST00000596121 CRISP1P54107 249 aa9.53□□□□□ -0.88
VRK3-210ENST00000596121 PPP1CBP62140 327 aa9.53□□□□□ -0.88
VRK3-210ENST00000596121 PCK2Q16822 640 aa9.53□□□□□ -0.88
VRK3-210ENST00000596121 ELFN2Q5R3F8 820 aa9.53□□□□□ -0.88
VRK3-210ENST00000596121 KDM4DQ6B0I6 523 aa9.53□□□□□ -0.88
VRK3-210ENST00000596121 SLC27A4Q6P1M0 643 aa9.53□□□□□ -0.88
VRK3-210ENST00000596121 PLBD1Q6P4A8 553 aa9.53□□□□□ -0.88
VRK3-210ENST00000596121 Q71RC1 249 aaPredicted RBP9.53□□□□□ -0.88
VRK3-210ENST00000596121 NAA40Q86UY6 237 aa9.53□□□□□ -0.88
VRK3-210ENST00000596121 GJC3Q8NFK1 279 aa9.53□□□□□ -0.88
VRK3-210ENST00000596121 KLF14Q8TD94 323 aaPredicted RBP9.53□□□□□ -0.88
VRK3-210ENST00000596121 IPCEF1Q8WWN9 437 aaPredicted RBP9.53□□□□□ -0.88
VRK3-210ENST00000596121 GABARAPL1Q9H0R8 117 aa9.53□□□□□ -0.88
VRK3-210ENST00000596121 ZNF556Q9HAH1 456 aa9.53□□□□□ -0.88
VRK3-210ENST00000596121 SLC25A19Q9HC21 320 aa9.53□□□□□ -0.88
VRK3-210ENST00000596121 DYNLRB1Q9NP97 96 aa9.53□□□□□ -0.88
VRK3-210ENST00000596121 HINT3Q9NQE9 182 aaKnown RBP9.53□□□□□ -0.88
VRK3-210ENST00000596121 PAPOLBQ9NRJ5 636 aaKnown RBP9.53□□□□□ -0.88
VRK3-210ENST00000596121 TAAR3PQ9P1P4 343 aa9.53□□□□□ -0.88
VRK3-210ENST00000596121 EIF3KQ9UBQ5 218 aaKnown RBP9.53□□□□□ -0.88
VRK3-210ENST00000596121 NDRG4Q9ULP0 352 aaKnown RBP9.53□□□□□ -0.88
VRK3-210ENST00000596121 COMMD3-BMI1R4GMX3 469 aa9.53□□□□□ -0.88
VRK3-210ENST00000596121 NF1P21359 2839 aa9.53□□□□□ -0.88
VRK3-210ENST00000596121 CR1P17927 2039 aa9.53□□□□□ -0.88
VRK3-210ENST00000596121 CHD3Q12873 2000 aaKnown RBP9.53□□□□□ -0.88
VRK3-210ENST00000596121 FN1P02751 2386 aaKnown RBP9.52□□□□□ -0.88
VRK3-210ENST00000596121 A0A1W2PPW3 197 aa9.52□□□□□ -0.89
VRK3-210ENST00000596121 VWC2LB2RUY7 222 aa9.52□□□□□ -0.89
VRK3-210ENST00000596121 M0R129 80 aa9.52□□□□□ -0.89
VRK3-210ENST00000596121 ZNF593O00488 134 aaPredicted RBP9.52□□□□□ -0.89
VRK3-210ENST00000596121 ABHD16AO95870 558 aa9.52□□□□□ -0.89
VRK3-210ENST00000596121 IFNGP01579 166 aa9.52□□□□□ -0.89
VRK3-210ENST00000596121 IGHV3-13P01766 116 aa9.52□□□□□ -0.89
VRK3-210ENST00000596121 HPXP02790 462 aa9.52□□□□□ -0.89
VRK3-210ENST00000596121 DAOP14920 347 aa9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms