RNA–Protein interactions for RNA: ENST00000593706.3

PNKP-202, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 849 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-202ENST00000593706 CCT8L2Q96SF2 557 aa12.46□□□□□ -0.41
PNKP-202ENST00000593706 MSL2Q9HCI7 577 aa12.46□□□□□ -0.41
PNKP-202ENST00000593706 PURGQ9UJV8 347 aaKnown RBP12.46□□□□□ -0.41
PNKP-202ENST00000593706 NPTNQ9Y639 398 aa12.46□□□□□ -0.41
PNKP-202ENST00000593706 CMYA5Q8N3K9 4069 aa12.46□□□□□ -0.42
PNKP-202ENST00000593706 PPIAL4EA0A075B759 164 aa12.45□□□□□ -0.42
PNKP-202ENST00000593706 PPIAL4CA0A0B4J2A2 164 aa12.45□□□□□ -0.42
PNKP-202ENST00000593706 A0A1W2PPL8 197 aa12.45□□□□□ -0.42
PNKP-202ENST00000593706 DNAJC9-AS1A6NH13 148 aa12.45□□□□□ -0.42
PNKP-202ENST00000593706 PPIAL4DF5H284 164 aa12.45□□□□□ -0.42
PNKP-202ENST00000593706 TMPRSS2O15393 492 aa12.45□□□□□ -0.42
PNKP-202ENST00000593706 PTP4A3O75365 173 aa12.45□□□□□ -0.42
PNKP-202ENST00000593706 DIRAS1O95057 198 aa12.45□□□□□ -0.42
PNKP-202ENST00000593706 FAM107AO95990 144 aa12.45□□□□□ -0.42
PNKP-202ENST00000593706 ADH4P08319 380 aa12.45□□□□□ -0.42
PNKP-202ENST00000593706 PPIAL4FP0DN26 164 aa12.45□□□□□ -0.42
PNKP-202ENST00000593706 HKR1P10072 659 aa12.45□□□□□ -0.42
PNKP-202ENST00000593706 TNFSF4P23510 183 aa12.45□□□□□ -0.42
PNKP-202ENST00000593706 LAP3P28838 519 aa12.45□□□□□ -0.42
PNKP-202ENST00000593706 MSX2P35548 267 aaPredicted RBP12.45□□□□□ -0.42
PNKP-202ENST00000593706 CTXN1P60606 82 aa12.45□□□□□ -0.42
PNKP-202ENST00000593706 PCBD1P61457 104 aa12.45□□□□□ -0.42
PNKP-202ENST00000593706 PRR31Q5SQ13 230 aa12.45□□□□□ -0.42
PNKP-202ENST00000593706 FAM27BQ5VT28 67 aa12.45□□□□□ -0.42
PNKP-202ENST00000593706 ARL9Q6T311 187 aa12.45□□□□□ -0.42
PNKP-202ENST00000593706 SHISA2Q6UWI4 295 aa12.45□□□□□ -0.42
PNKP-202ENST00000593706 ZER1Q7Z7L7 766 aa12.45□□□□□ -0.42
PNKP-202ENST00000593706 SPICQ8N5J4 248 aa12.45□□□□□ -0.42
PNKP-202ENST00000593706 DVL3Q92997 716 aaPredicted RBP12.45□□□□□ -0.42
PNKP-202ENST00000593706 POP5Q969H6 163 aaKnown RBP12.45□□□□□ -0.42
PNKP-202ENST00000593706 PYURFQ96I23 114 aa12.45□□□□□ -0.42
PNKP-202ENST00000593706 DUX5Q96PT3 197 aa12.45□□□□□ -0.42
PNKP-202ENST00000593706 DCLRE1CQ96SD1 692 aaKnown RBP12.45□□□□□ -0.42
PNKP-202ENST00000593706 GPX7Q96SL4 187 aaPredicted RBP12.45□□□□□ -0.42
PNKP-202ENST00000593706 CDRT15Q96T59 188 aa12.45□□□□□ -0.42
PNKP-202ENST00000593706 GPA33Q99795 319 aa12.45□□□□□ -0.42
PNKP-202ENST00000593706 MRI1Q9BV20 369 aa12.45□□□□□ -0.42
PNKP-202ENST00000593706 ZNF747Q9BV97 191 aa12.45□□□□□ -0.42
PNKP-202ENST00000593706 OR2H1Q9GZK4 316 aa12.45□□□□□ -0.42
PNKP-202ENST00000593706 ZMAT3Q9HA38 289 aaKnown RBP12.45□□□□□ -0.42
PNKP-202ENST00000593706 ELOVL3Q9HB03 270 aa12.45□□□□□ -0.42
PNKP-202ENST00000593706 SIGLEC7Q9Y286 467 aa12.45□□□□□ -0.42
PNKP-202ENST00000593706 TMEM5Q9Y2B1 443 aa12.45□□□□□ -0.42
PNKP-202ENST00000593706 ADAM18Q9Y3Q7 739 aa12.45□□□□□ -0.42
PNKP-202ENST00000593706 ABHD16AO95870 558 aa12.44□□□□□ -0.42
PNKP-202ENST00000593706 NGFP01138 241 aa12.44□□□□□ -0.42
PNKP-202ENST00000593706 IGHV2-70P01814 119 aa12.44□□□□□ -0.42
PNKP-202ENST00000593706 CD55P08174 381 aa12.44□□□□□ -0.42
PNKP-202ENST00000593706 CST2P09228 141 aa12.44□□□□□ -0.42
PNKP-202ENST00000593706 SBK2P0C263 348 aa12.44□□□□□ -0.42
PNKP-202ENST00000593706 ZFP36P26651 326 aaKnown RBP12.44□□□□□ -0.42
PNKP-202ENST00000593706 HNRNPA0Q13151 305 aaKnown RBP12.44□□□□□ -0.42
PNKP-202ENST00000593706 ZBED5Q49AG3 693 aa12.44□□□□□ -0.42
PNKP-202ENST00000593706 MESTQ5EB52 335 aa12.44□□□□□ -0.42
PNKP-202ENST00000593706 MTX3Q5HYI7 312 aa12.44□□□□□ -0.42
PNKP-202ENST00000593706 DEFB107AQ8IZN7 70 aa12.44□□□□□ -0.42
PNKP-202ENST00000593706 DEFB108BQ8NET1 73 aa12.44□□□□□ -0.42
PNKP-202ENST00000593706 FAM46AQ96IP4 442 aaKnown RBP12.44□□□□□ -0.42
PNKP-202ENST00000593706 RBP7Q96R05 134 aa12.44□□□□□ -0.42
PNKP-202ENST00000593706 WNT5BQ9H1J7 359 aa12.44□□□□□ -0.42
PNKP-202ENST00000593706 DCAF16Q9NXF7 216 aa12.44□□□□□ -0.42
PNKP-202ENST00000593706 NDE1Q9NXR1 346 aa12.44□□□□□ -0.42
PNKP-202ENST00000593706 NUP50Q9UKX7 468 aa12.44□□□□□ -0.42
PNKP-202ENST00000593706 TIMM10BQ9Y5J6 103 aa12.44□□□□□ -0.42
PNKP-202ENST00000593706 AUP1Q9Y679 476 aa12.44□□□□□ -0.42
PNKP-202ENST00000593706 VWFP04275 2813 aa12.44□□□□□ -0.42
PNKP-202ENST00000593706 NOTCH1P46531 2555 aa12.43□□□□□ -0.42
PNKP-202ENST00000593706 A6NIZ1 184 aa12.43□□□□□ -0.42
PNKP-202ENST00000593706 CD14P08571 375 aa12.43□□□□□ -0.42
PNKP-202ENST00000593706 T-ENOLP0DO92 83 aa12.43□□□□□ -0.42
PNKP-202ENST00000593706 TNFRSF1AP19438 455 aa12.43□□□□□ -0.42
PNKP-202ENST00000593706 GSTM3P21266 225 aa12.43□□□□□ -0.42
PNKP-202ENST00000593706 ATP6V1B2P21281 511 aa12.43□□□□□ -0.42
PNKP-202ENST00000593706 PRTN3P24158 256 aa12.43□□□□□ -0.42
PNKP-202ENST00000593706 RAP1BP61224 184 aa12.43□□□□□ -0.42
PNKP-202ENST00000593706 RAP1AP62834 184 aa12.43□□□□□ -0.42
PNKP-202ENST00000593706 ZNF154Q13106 437 aa12.43□□□□□ -0.42
PNKP-202ENST00000593706 BAMBIQ13145 260 aa12.43□□□□□ -0.42
PNKP-202ENST00000593706 SPRNQ5BIV9 151 aa12.43□□□□□ -0.42
PNKP-202ENST00000593706 FGD3Q5JSP0 725 aa12.43□□□□□ -0.42
PNKP-202ENST00000593706 ZNF774Q6NX45 483 aa12.43□□□□□ -0.42
PNKP-202ENST00000593706 C16orf89Q6UX73 402 aa12.43□□□□□ -0.42
PNKP-202ENST00000593706 DOK3Q7L591 496 aa12.43□□□□□ -0.42
PNKP-202ENST00000593706 NPEPL1Q8NDH3 523 aa12.43□□□□□ -0.42
PNKP-202ENST00000593706 OR2Z1Q8NG97 314 aa12.43□□□□□ -0.42
PNKP-202ENST00000593706 FNDC8Q8TC99 324 aa12.43□□□□□ -0.42
PNKP-202ENST00000593706 C4orf45Q96LM5 186 aa12.43□□□□□ -0.42
PNKP-202ENST00000593706 C1QTNF5Q9BXJ0 243 aa12.43□□□□□ -0.42
PNKP-202ENST00000593706 ZNF696Q9H7X3 374 aa12.43□□□□□ -0.42
PNKP-202ENST00000593706 MMP26Q9NRE1 261 aa12.43□□□□□ -0.42
PNKP-202ENST00000593706 TMEM106BQ9NUM4 274 aa12.43□□□□□ -0.42
PNKP-202ENST00000593706 PLEK2Q9NYT0 353 aa12.43□□□□□ -0.42
PNKP-202ENST00000593706 ZNF69Q9UC07 566 aa12.43□□□□□ -0.42
PNKP-202ENST00000593706 NDRG4Q9ULP0 352 aaKnown RBP12.43□□□□□ -0.42
PNKP-202ENST00000593706 FAM32AQ9Y421 112 aaKnown RBP12.43□□□□□ -0.42
PNKP-202ENST00000593706 V9GYQ6 96 aa12.43□□□□□ -0.42
PNKP-202ENST00000593706 C12orf71A8MTZ7 269 aa12.42□□□□□ -0.42
PNKP-202ENST00000593706 H7C1C5 153 aa12.42□□□□□ -0.42
PNKP-202ENST00000593706 ICMTO60725 284 aa12.42□□□□□ -0.42
PNKP-202ENST00000593706 MSR1P21757 451 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms