RNA–Protein interactions for RNA: ENST00000593564.2

LSM4-202, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM4, Length 656 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-202ENST00000593564 FAM122BQ7Z309 247 aa20.14■□□□□ 0.81
LSM4-202ENST00000593564 ARPINQ7Z6K5 226 aa20.14■□□□□ 0.81
LSM4-202ENST00000593564 SIGLECL1Q8N7X8 197 aa20.14■□□□□ 0.81
LSM4-202ENST00000593564 ITLN1Q8WWA0 313 aa20.14■□□□□ 0.81
LSM4-202ENST00000593564 RCN3Q96D15 328 aa20.14■□□□□ 0.81
LSM4-202ENST00000593564 ZNF570Q96NI8 536 aa20.14■□□□□ 0.81
LSM4-202ENST00000593564 NDEL1Q9GZM8 345 aa20.14■□□□□ 0.81
LSM4-202ENST00000593564 PLEK2Q9NYT0 353 aa20.14■□□□□ 0.81
LSM4-202ENST00000593564 NUP50Q9UKX7 468 aa20.14■□□□□ 0.81
LSM4-202ENST00000593564 PPP1R3CQ9UQK1 317 aa20.14■□□□□ 0.81
LSM4-202ENST00000593564 AUP1Q9Y679 476 aa20.14■□□□□ 0.81
LSM4-202ENST00000593564 MEGF8Q7Z7M0 2845 aa20.14■□□□□ 0.81
LSM4-202ENST00000593564 F5H0A9 414 aaPredicted RBP20.13■□□□□ 0.81
LSM4-202ENST00000593564 WIPF1O43516 503 aa20.13■□□□□ 0.81
LSM4-202ENST00000593564 ZNF682O95780 498 aa20.13■□□□□ 0.81
LSM4-202ENST00000593564 CTLA4P16410 223 aa20.13■□□□□ 0.81
LSM4-202ENST00000593564 RBMXP38159 391 aaKnown RBP20.13■□□□□ 0.81
LSM4-202ENST00000593564 SEC61A1P61619 476 aaKnown RBP20.13■□□□□ 0.81
LSM4-202ENST00000593564 SF3A3Q12874 501 aaKnown RBP eCLIP20.13■□□□□ 0.81
LSM4-202ENST00000593564 ZMYND11Q15326 602 aa20.13■□□□□ 0.81
LSM4-202ENST00000593564 CBLL1Q75N03 491 aa20.13■□□□□ 0.81
LSM4-202ENST00000593564 DOK3Q7L591 496 aa20.13■□□□□ 0.81
LSM4-202ENST00000593564 SLC15A3Q8IY34 581 aa20.13■□□□□ 0.81
LSM4-202ENST00000593564 PTP4A1Q93096 173 aa20.13■□□□□ 0.81
LSM4-202ENST00000593564 ANKRD19PQ9H560 264 aa20.13■□□□□ 0.81
LSM4-202ENST00000593564 GMPR2Q9P2T1 348 aaKnown RBP20.13■□□□□ 0.81
LSM4-202ENST00000593564 INSIG2Q9Y5U4 225 aa20.13■□□□□ 0.81
LSM4-202ENST00000593564 OR6C6A6NF89 314 aa20.12■□□□□ 0.81
LSM4-202ENST00000593564 J3QW42 95 aa20.12■□□□□ 0.81
LSM4-202ENST00000593564 CXCR6O00574 342 aa20.12■□□□□ 0.81
LSM4-202ENST00000593564 SLC22A2O15244 555 aa20.12■□□□□ 0.81
LSM4-202ENST00000593564 HKR1P10072 659 aa20.12■□□□□ 0.81
LSM4-202ENST00000593564 FOXL1Q12952 345 aa20.12■□□□□ 0.81
LSM4-202ENST00000593564 KLF17Q5JT82 389 aaPredicted RBP20.12■□□□□ 0.81
LSM4-202ENST00000593564 OR2V2Q96R30 315 aa20.12■□□□□ 0.81
LSM4-202ENST00000593564 GPA33Q99795 319 aa20.12■□□□□ 0.81
LSM4-202ENST00000593564 MRI1Q9BV20 369 aa20.12■□□□□ 0.81
LSM4-202ENST00000593564 ARGLU1Q9NWB6 273 aaPredicted RBP20.12■□□□□ 0.81
LSM4-202ENST00000593564 ZNF69Q9UC07 566 aa20.12■□□□□ 0.81
LSM4-202ENST00000593564 TMEM5Q9Y2B1 443 aa20.12■□□□□ 0.81
LSM4-202ENST00000593564 RAC2P15153 192 aa20.11■□□□□ 0.81
LSM4-202ENST00000593564 PRTN3P24158 256 aa20.11■□□□□ 0.81
LSM4-202ENST00000593564 MDH2P40926 338 aaKnown RBP20.11■□□□□ 0.81
LSM4-202ENST00000593564 ERFP50548 548 aa20.11■□□□□ 0.81
LSM4-202ENST00000593564 LSM6P62312 80 aaKnown RBP20.11■□□□□ 0.81
LSM4-202ENST00000593564 GUCY1A3Q02108 690 aa20.11■□□□□ 0.81
LSM4-202ENST00000593564 LIPEQ05469 1076 aa20.11■□□□□ 0.81
LSM4-202ENST00000593564 KRR1Q13601 381 aaKnown RBP20.11■□□□□ 0.81
LSM4-202ENST00000593564 FKBP9P1Q75LS8 142 aa20.11■□□□□ 0.81
LSM4-202ENST00000593564 RRM2BQ7LG56 351 aa20.11■□□□□ 0.81
LSM4-202ENST00000593564 SLC7A6Q92536 515 aa20.11■□□□□ 0.81
LSM4-202ENST00000593564 ZNF747Q9BV97 191 aa20.11■□□□□ 0.81
LSM4-202ENST00000593564 ZMAT3Q9HA38 289 aaKnown RBP20.11■□□□□ 0.81
LSM4-202ENST00000593564 NMNAT1Q9HAN9 279 aaPredicted RBP20.11■□□□□ 0.81
LSM4-202ENST00000593564 ASH2LQ9UBL3 628 aa20.11■□□□□ 0.81
LSM4-202ENST00000593564 ATPIF1Q9UII2 106 aa20.11■□□□□ 0.81
LSM4-202ENST00000593564 TMEM178BH3BS89 294 aa20.1■□□□□ 0.81
LSM4-202ENST00000593564 IFNL4K9M1U5 179 aa20.1■□□□□ 0.81
LSM4-202ENST00000593564 KHDRBS3O75525 346 aaKnown RBP20.1■□□□□ 0.81
LSM4-202ENST00000593564 H2AFXP16104 143 aaPredicted RBP20.1■□□□□ 0.81
LSM4-202ENST00000593564 SDHAP31040 664 aa20.1■□□□□ 0.81
LSM4-202ENST00000593564 MMP16P51512 607 aa20.1■□□□□ 0.81
LSM4-202ENST00000593564 CCDC92Q53HC0 331 aaPredicted RBP20.1■□□□□ 0.81
LSM4-202ENST00000593564 ESCO2Q56NI9 601 aa20.1■□□□□ 0.81
LSM4-202ENST00000593564 C1orf94Q6P1W5 598 aa20.1■□□□□ 0.81
LSM4-202ENST00000593564 GLB1L2Q8IW92 636 aa20.1■□□□□ 0.81
LSM4-202ENST00000593564 MUC20Q8N307 709 aaPredicted RBP20.1■□□□□ 0.81
LSM4-202ENST00000593564 POU5F2Q8N7G0 328 aa20.1■□□□□ 0.81
LSM4-202ENST00000593564 OR1F12Q8NHA8 337 aa20.1■□□□□ 0.81
LSM4-202ENST00000593564 SLC7A13Q8TCU3 470 aa20.1■□□□□ 0.81
LSM4-202ENST00000593564 RASD2Q96D21 266 aa20.1■□□□□ 0.81
LSM4-202ENST00000593564 HSH2DQ96JZ2 352 aa20.1■□□□□ 0.81
LSM4-202ENST00000593564 GPX7Q96SL4 187 aaPredicted RBP20.1■□□□□ 0.81
LSM4-202ENST00000593564 SYT4Q9H2B2 425 aa20.1■□□□□ 0.81
LSM4-202ENST00000593564 GCM1Q9NP62 436 aa20.1■□□□□ 0.81
LSM4-202ENST00000593564 NRIP3Q9NQ35 241 aa20.1■□□□□ 0.81
LSM4-202ENST00000593564 VSX1Q9NZR4 365 aaPredicted RBP20.1■□□□□ 0.81
LSM4-202ENST00000593564 ARMCX1Q9P291 453 aa20.1■□□□□ 0.81
LSM4-202ENST00000593564 LRCH1Q9Y2L9 728 aa20.1■□□□□ 0.81
LSM4-202ENST00000593564 PCDHGB1Q9Y5G3 927 aa20.1■□□□□ 0.81
LSM4-202ENST00000593564 PKD1L1Q8TDX9 2849 aa20.09■□□□□ 0.81
LSM4-202ENST00000593564 DNAJC9-AS1A6NH13 148 aa20.09■□□□□ 0.81
LSM4-202ENST00000593564 CEACAM18A8MTB9 384 aa20.09■□□□□ 0.81
LSM4-202ENST00000593564 GSTA4O15217 222 aa20.09■□□□□ 0.81
LSM4-202ENST00000593564 SLC16A7O60669 478 aa20.09■□□□□ 0.81
LSM4-202ENST00000593564 PTP4A3O75365 173 aa20.09■□□□□ 0.81
LSM4-202ENST00000593564 SASH3O75995 380 aa20.09■□□□□ 0.81
LSM4-202ENST00000593564 NDUFB2O95178 105 aa20.09■□□□□ 0.81
LSM4-202ENST00000593564 SERPINA1P01009 418 aa20.09■□□□□ 0.81
LSM4-202ENST00000593564 CPT2P23786 658 aa20.09■□□□□ 0.81
LSM4-202ENST00000593564 RGS6P49758 472 aa20.09■□□□□ 0.81
LSM4-202ENST00000593564 OTPQ5XKR4 325 aa20.09■□□□□ 0.81
LSM4-202ENST00000593564 GPR139Q6DWJ6 353 aa20.09■□□□□ 0.81
LSM4-202ENST00000593564 SLC27A4Q6P1M0 643 aa20.09■□□□□ 0.81
LSM4-202ENST00000593564 FBXW12Q6X9E4 464 aa20.09■□□□□ 0.81
LSM4-202ENST00000593564 CYP4Z1Q86W10 505 aa20.09■□□□□ 0.81
LSM4-202ENST00000593564 RP9Q8TA86 221 aaKnown RBP20.09■□□□□ 0.81
LSM4-202ENST00000593564 OR5V1Q9UGF6 321 aa20.09■□□□□ 0.81
LSM4-202ENST00000593564 SIGLEC7Q9Y286 467 aa20.09■□□□□ 0.81
LSM4-202ENST00000593564 COA3Q9Y2R0 106 aaPredicted RBP20.09■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms