RNA–Protein interactions for RNA: ENST00000593074.5

CLIP3-206, Transcript of CAP-Gly domain containing linker protein 3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CLIP3, Length 2,080 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP3-206ENST00000593074 HIST3H3Q16695 136 aa17.51■□□□□ 0.39
CLIP3-206ENST00000593074 ELFN2Q5R3F8 820 aa17.51■□□□□ 0.39
CLIP3-206ENST00000593074 TMEM244Q5VVB8 128 aa17.51■□□□□ 0.39
CLIP3-206ENST00000593074 TMPPEQ6ZT21 453 aa17.51■□□□□ 0.39
CLIP3-206ENST00000593074 HIST2H2ABQ8IUE6 130 aaPredicted RBP17.51■□□□□ 0.39
CLIP3-206ENST00000593074 PLPP7Q8NBV4 271 aa17.51■□□□□ 0.39
CLIP3-206ENST00000593074 OR10S1Q8NGN2 331 aa17.51■□□□□ 0.39
CLIP3-206ENST00000593074 OR56B4Q8NH76 319 aa17.51■□□□□ 0.39
CLIP3-206ENST00000593074 FAM3DQ96BQ1 224 aa17.51■□□□□ 0.39
CLIP3-206ENST00000593074 LIN37Q96GY3 246 aaPredicted RBP17.51■□□□□ 0.39
CLIP3-206ENST00000593074 OR2M2Q96R28 347 aa17.51■□□□□ 0.39
CLIP3-206ENST00000593074 HPF1Q9NWY4 346 aa17.51■□□□□ 0.39
CLIP3-206ENST00000593074 MRPL15Q9P015 296 aaKnown RBP17.51■□□□□ 0.39
CLIP3-206ENST00000593074 GGT3PA6NGU5 568 aa17.51■□□□□ 0.39
CLIP3-206ENST00000593074 SULT2B1O00204 365 aa17.51■□□□□ 0.39
CLIP3-206ENST00000593074 GMDSO60547 372 aa17.51■□□□□ 0.39
CLIP3-206ENST00000593074 H2AFB2P0C5Z0 115 aa17.51■□□□□ 0.39
CLIP3-206ENST00000593074 GSTT2BP0CG30 244 aa17.51■□□□□ 0.39
CLIP3-206ENST00000593074 PTHLHP12272 177 aa17.51■□□□□ 0.39
CLIP3-206ENST00000593074 ZNF43P17038 809 aa17.51■□□□□ 0.39
CLIP3-206ENST00000593074 GZMKP49863 264 aa17.51■□□□□ 0.39
CLIP3-206ENST00000593074 EFNB2P52799 333 aa17.51■□□□□ 0.39
CLIP3-206ENST00000593074 DSCR4P56555 118 aaPredicted RBP17.51■□□□□ 0.39
CLIP3-206ENST00000593074 GSG1Q2KHT4 349 aa17.51■□□□□ 0.39
CLIP3-206ENST00000593074 TMEM255AQ5JRV8 349 aa17.51■□□□□ 0.39
CLIP3-206ENST00000593074 GLT8D1Q68CQ7 371 aa17.51■□□□□ 0.39
CLIP3-206ENST00000593074 SLC25A47Q6Q0C1 308 aa17.51■□□□□ 0.39
CLIP3-206ENST00000593074 SLC25A28Q96A46 364 aa17.51■□□□□ 0.39
CLIP3-206ENST00000593074 C20orf85Q9H1P6 137 aa17.51■□□□□ 0.39
CLIP3-206ENST00000593074 MED28Q9H204 178 aa17.51■□□□□ 0.39
CLIP3-206ENST00000593074 C1orf198Q9H425 327 aa17.51■□□□□ 0.39
CLIP3-206ENST00000593074 CENPMQ9NSP4 180 aa17.51■□□□□ 0.39
CLIP3-206ENST00000593074 RYDENQ9NUL5 291 aaKnown RBP17.51■□□□□ 0.39
CLIP3-206ENST00000593074 LHFPL6Q9Y693 200 aa17.51■□□□□ 0.39
CLIP3-206ENST00000593074 A0A1W2PPL8 197 aa17.5■□□□□ 0.39
CLIP3-206ENST00000593074 MASP2O00187 686 aa17.5■□□□□ 0.39
CLIP3-206ENST00000593074 EIF1AYO14602 144 aaKnown RBP17.5■□□□□ 0.39
CLIP3-206ENST00000593074 STOMP27105 288 aa17.5■□□□□ 0.39
CLIP3-206ENST00000593074 TOMM20Q15388 145 aa17.5■□□□□ 0.39
CLIP3-206ENST00000593074 SPRY4Q9C004 299 aa17.5■□□□□ 0.39
CLIP3-206ENST00000593074 CDV3Q9UKY7 258 aaKnown RBP17.5■□□□□ 0.39
CLIP3-206ENST00000593074 LOC101059948A0A1B0GTJ6 334 aa17.49■□□□□ 0.39
CLIP3-206ENST00000593074 CIB4A0PJX0 185 aa17.49■□□□□ 0.39
CLIP3-206ENST00000593074 ZNF806P0C7X5 589 aa17.49■□□□□ 0.39
CLIP3-206ENST00000593074 KLK2P20151 261 aa17.49■□□□□ 0.39
CLIP3-206ENST00000593074 H3F3AP84243 136 aa17.49■□□□□ 0.39
CLIP3-206ENST00000593074 FAPQ12884 760 aa17.49■□□□□ 0.39
CLIP3-206ENST00000593074 C2orf76Q3KRA6 126 aa17.49■□□□□ 0.39
CLIP3-206ENST00000593074 CDCP2Q5VXM1 449 aa17.49■□□□□ 0.39
CLIP3-206ENST00000593074 BIVMQ86UB2 503 aa17.49■□□□□ 0.39
CLIP3-206ENST00000593074 GNRHR2Q96P88 292 aa17.49■□□□□ 0.39
CLIP3-206ENST00000593074 OR51J1Q9H342 316 aa17.49■□□□□ 0.39
CLIP3-206ENST00000593074 GPR179Q6PRD1 2367 aa17.49■□□□□ 0.39
CLIP3-206ENST00000593074 MEGF11A6BM72 1044 aa17.49■□□□□ 0.39
CLIP3-206ENST00000593074 HPP00738 406 aa17.49■□□□□ 0.39
CLIP3-206ENST00000593074 GSTT2P0CG29 244 aa17.49■□□□□ 0.39
CLIP3-206ENST00000593074 RCVRNP35243 200 aa17.49■□□□□ 0.39
CLIP3-206ENST00000593074 DNASE1L1P49184 302 aa17.49■□□□□ 0.39
CLIP3-206ENST00000593074 FCN2Q15485 313 aa17.49■□□□□ 0.39
CLIP3-206ENST00000593074 CD276Q5ZPR3 534 aa17.49■□□□□ 0.39
CLIP3-206ENST00000593074 CFAP77Q6ZQR2 320 aa17.49■□□□□ 0.39
CLIP3-206ENST00000593074 RHOUQ7L0Q8 258 aa17.49■□□□□ 0.39
CLIP3-206ENST00000593074 GIMAP1Q8WWP7 306 aa17.49■□□□□ 0.39
CLIP3-206ENST00000593074 DEDD2Q8WXF8 326 aa17.49■□□□□ 0.39
CLIP3-206ENST00000593074 CDC6Q99741 560 aa17.49■□□□□ 0.39
CLIP3-206ENST00000593074 PLSCR3Q9NRY6 295 aa17.49■□□□□ 0.39
CLIP3-206ENST00000593074 GDF2Q9UK05 429 aaPredicted RBP17.49■□□□□ 0.39
CLIP3-206ENST00000593074 TMEM272A0A1B0GTI8 110 aa17.48■□□□□ 0.39
CLIP3-206ENST00000593074 C9orf172C9J069 976 aa17.48■□□□□ 0.39
CLIP3-206ENST00000593074 ZIC3O60481 467 aa17.48■□□□□ 0.39
CLIP3-206ENST00000593074 TTRP02766 147 aa17.48■□□□□ 0.39
CLIP3-206ENST00000593074 ACSM4P0C7M7 580 aa17.48■□□□□ 0.39
CLIP3-206ENST00000593074 EIF1AXP47813 144 aaKnown RBP17.48■□□□□ 0.39
CLIP3-206ENST00000593074 MFAP5Q13361 173 aa17.48■□□□□ 0.39
CLIP3-206ENST00000593074 TNK1Q13470 666 aa17.48■□□□□ 0.39
CLIP3-206ENST00000593074 KCNMB1Q16558 191 aa17.48■□□□□ 0.39
CLIP3-206ENST00000593074 ELMOD2Q8IZ81 293 aa17.48■□□□□ 0.39
CLIP3-206ENST00000593074 OR51A2Q8NGJ7 313 aa17.48■□□□□ 0.39
CLIP3-206ENST00000593074 OR6M1Q8NGM8 313 aa17.48■□□□□ 0.39
CLIP3-206ENST00000593074 KCNK15Q9H427 330 aa17.48■□□□□ 0.39
CLIP3-206ENST00000593074 DIABLOQ9NR28 239 aa17.48■□□□□ 0.39
CLIP3-206ENST00000593074 BOLA1Q9Y3E2 137 aa17.48■□□□□ 0.39
CLIP3-206ENST00000593074 LOC390937A0A1W2PQ73 354 aa17.48■□□□□ 0.39
CLIP3-206ENST00000593074 H7C417 338 aa17.48■□□□□ 0.39
CLIP3-206ENST00000593074 P2RY10O00398 339 aa17.48■□□□□ 0.39
CLIP3-206ENST00000593074 DOK2O60496 412 aa17.48■□□□□ 0.39
CLIP3-206ENST00000593074 PEX14O75381 377 aa17.48■□□□□ 0.39
CLIP3-206ENST00000593074 MT-CO3P00414 261 aa17.48■□□□□ 0.39
CLIP3-206ENST00000593074 ZNF17P17021 662 aa17.48■□□□□ 0.39
CLIP3-206ENST00000593074 PSMB1P20618 241 aaKnown RBP17.48■□□□□ 0.39
CLIP3-206ENST00000593074 HTR2CP28335 458 aa17.48■□□□□ 0.39
CLIP3-206ENST00000593074 CHAF1BQ13112 559 aa17.48■□□□□ 0.39
CLIP3-206ENST00000593074 GLYATL3Q5SZD4 288 aa17.48■□□□□ 0.39
CLIP3-206ENST00000593074 TMEM164Q5U3C3 297 aa17.48■□□□□ 0.39
CLIP3-206ENST00000593074 CARD17Q5XLA6 110 aa17.48■□□□□ 0.39
CLIP3-206ENST00000593074 KLHL24Q6TFL4 600 aa17.48■□□□□ 0.39
CLIP3-206ENST00000593074 NKAIN3Q8N8D7 197 aa17.48■□□□□ 0.39
CLIP3-206ENST00000593074 ASCC1Q8N9N2 400 aaKnown RBP17.48■□□□□ 0.39
CLIP3-206ENST00000593074 OR11H7Q8NGC8 314 aa17.48■□□□□ 0.39
CLIP3-206ENST00000593074 ZFAND1Q8TCF1 268 aa17.48■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms