RNA–Protein interactions for RNA: ENST00000593026.1

DDX39A-221, Transcript of DExD-box helicase 39A, humanhuman

TSL 3

Gene DDX39A, Length 657 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-221ENST00000593026 BCDIN3DQ7Z5W3 292 aaKnown RBP12.9□□□□□ -0.34
DDX39A-221ENST00000593026 FBXL14Q8N1E6 418 aa12.9□□□□□ -0.34
DDX39A-221ENST00000593026 OR6N2Q8NGY6 317 aa12.9□□□□□ -0.34
DDX39A-221ENST00000593026 OR1F12Q8NHA8 337 aa12.9□□□□□ -0.34
DDX39A-221ENST00000593026 NINJ1Q92982 152 aa12.9□□□□□ -0.34
DDX39A-221ENST00000593026 PITX2Q99697 317 aa12.9□□□□□ -0.34
DDX39A-221ENST00000593026 ZNF442Q9H7R0 627 aa12.9□□□□□ -0.34
DDX39A-221ENST00000593026 LAMP3Q9UQV4 416 aa12.9□□□□□ -0.34
DDX39A-221ENST00000593026 GMPPBQ9Y5P6 360 aa12.9□□□□□ -0.34
DDX39A-221ENST00000593026 ROS1P08922 2347 aa12.9□□□□□ -0.34
DDX39A-221ENST00000593026 LRBAP50851 2863 aa12.89□□□□□ -0.35
DDX39A-221ENST00000593026 CCDC182A6NF36 153 aa12.89□□□□□ -0.35
DDX39A-221ENST00000593026 VSTM5A8MXK1 200 aa12.89□□□□□ -0.35
DDX39A-221ENST00000593026 E9PQ18 207 aa12.89□□□□□ -0.35
DDX39A-221ENST00000593026 FAM157BP0CG42 384 aa12.89□□□□□ -0.35
DDX39A-221ENST00000593026 PSKH1P11801 424 aa12.89□□□□□ -0.35
DDX39A-221ENST00000593026 CD53P19397 219 aa12.89□□□□□ -0.35
DDX39A-221ENST00000593026 PCSK6P29122 969 aa12.89□□□□□ -0.35
DDX39A-221ENST00000593026 APOBEC3AP31941 199 aaPredicted RBP12.89□□□□□ -0.35
DDX39A-221ENST00000593026 TTKP33981 857 aa12.89□□□□□ -0.35
DDX39A-221ENST00000593026 THBS4P35443 961 aa12.89□□□□□ -0.35
DDX39A-221ENST00000593026 RPS23P62266 143 aaKnown RBP12.89□□□□□ -0.35
DDX39A-221ENST00000593026 PCK2Q16822 640 aa12.89□□□□□ -0.35
DDX39A-221ENST00000593026 UNQ6126/PRO20091Q6UXV3 157 aa12.89□□□□□ -0.35
DDX39A-221ENST00000593026 MEPCEQ7L2J0 689 aaKnown RBP12.89□□□□□ -0.35
DDX39A-221ENST00000593026 DCXRQ7Z4W1 244 aa12.89□□□□□ -0.35
DDX39A-221ENST00000593026 GID4Q8IVV7 300 aa12.89□□□□□ -0.35
DDX39A-221ENST00000593026 TIGD4Q8IY51 512 aa12.89□□□□□ -0.35
DDX39A-221ENST00000593026 MUC15Q8N387 334 aa12.89□□□□□ -0.35
DDX39A-221ENST00000593026 TRUB1Q8WWH5 349 aaKnown RBP12.89□□□□□ -0.35
DDX39A-221ENST00000593026 TEAD3Q99594 435 aa12.89□□□□□ -0.35
DDX39A-221ENST00000593026 COQ7Q99807 217 aa12.89□□□□□ -0.35
DDX39A-221ENST00000593026 ATF6BQ99941 703 aa12.89□□□□□ -0.35
DDX39A-221ENST00000593026 VCXQ9H320 206 aa12.89□□□□□ -0.35
DDX39A-221ENST00000593026 OR51B6Q9H340 312 aa12.89□□□□□ -0.35
DDX39A-221ENST00000593026 FAM118AQ9NWS6 357 aa12.89□□□□□ -0.35
DDX39A-221ENST00000593026 EIF3KQ9UBQ5 218 aaKnown RBP12.89□□□□□ -0.35
DDX39A-221ENST00000593026 SLC22A31A6NKX4 558 aa12.88□□□□□ -0.35
DDX39A-221ENST00000593026 GPRIN2O60269 458 aa12.88□□□□□ -0.35
DDX39A-221ENST00000593026 SOD3P08294 240 aa12.88□□□□□ -0.35
DDX39A-221ENST00000593026 OR4A8P0C604 315 aa12.88□□□□□ -0.35
DDX39A-221ENST00000593026 GLRXP35754 106 aa12.88□□□□□ -0.35
DDX39A-221ENST00000593026 WNT5AP41221 380 aa12.88□□□□□ -0.35
DDX39A-221ENST00000593026 NAA10P41227 235 aaPredicted RBP12.88□□□□□ -0.35
DDX39A-221ENST00000593026 RAD52P43351 418 aa12.88□□□□□ -0.35
DDX39A-221ENST00000593026 UCP2P55851 309 aa12.88□□□□□ -0.35
DDX39A-221ENST00000593026 ECH1Q13011 328 aa12.88□□□□□ -0.35
DDX39A-221ENST00000593026 EIF2B1Q14232 305 aaKnown RBP12.88□□□□□ -0.35
DDX39A-221ENST00000593026 ADIPOQQ15848 244 aa12.88□□□□□ -0.35
DDX39A-221ENST00000593026 AGAP6Q5VW22 663 aa12.88□□□□□ -0.35
DDX39A-221ENST00000593026 ARL9Q6T311 187 aa12.88□□□□□ -0.35
DDX39A-221ENST00000593026 SHFQ7M4L6 423 aa12.88□□□□□ -0.35
DDX39A-221ENST00000593026 DPY19L4Q7Z388 723 aa12.88□□□□□ -0.35
DDX39A-221ENST00000593026 DTX2Q86UW9 622 aa12.88□□□□□ -0.35
DDX39A-221ENST00000593026 ZNF555Q8NEP9 628 aa12.88□□□□□ -0.35
DDX39A-221ENST00000593026 TMEM171Q8WVE6 324 aa12.88□□□□□ -0.35
DDX39A-221ENST00000593026 SLC7A6Q92536 515 aa12.88□□□□□ -0.35
DDX39A-221ENST00000593026 PIGTQ969N2 578 aa12.88□□□□□ -0.35
DDX39A-221ENST00000593026 MAP6Q96JE9 813 aa12.88□□□□□ -0.35
DDX39A-221ENST00000593026 BCL2L14Q9BZR8 327 aa12.88□□□□□ -0.35
DDX39A-221ENST00000593026 POLQO75417 2590 aa12.88□□□□□ -0.35
DDX39A-221ENST00000593026 AKAP6Q13023 2319 aa12.88□□□□□ -0.35
DDX39A-221ENST00000593026 ANKRD17O75179 2603 aaKnown RBP12.87□□□□□ -0.35
DDX39A-221ENST00000593026 SPG11Q96JI7 2443 aa12.87□□□□□ -0.35
DDX39A-221ENST00000593026 PLCE1Q9P212 2302 aa12.87□□□□□ -0.35
DDX39A-221ENST00000593026 LOC100130705A0A1B0GUX0 176 aa12.87□□□□□ -0.35
DDX39A-221ENST00000593026 DLGAP1O14490 977 aa12.87□□□□□ -0.35
DDX39A-221ENST00000593026 SELENOFO60613 162 aa12.87□□□□□ -0.35
DDX39A-221ENST00000593026 ICMTO60725 284 aa12.87□□□□□ -0.35
DDX39A-221ENST00000593026 SMPD2O60906 423 aa12.87□□□□□ -0.35
DDX39A-221ENST00000593026 ABHD16AO95870 558 aa12.87□□□□□ -0.35
DDX39A-221ENST00000593026 LCKP06239 509 aa12.87□□□□□ -0.35
DDX39A-221ENST00000593026 SERPINF1P36955 418 aa12.87□□□□□ -0.35
DDX39A-221ENST00000593026 SLC16A9Q7RTY1 509 aa12.87□□□□□ -0.35
DDX39A-221ENST00000593026 ZNF101Q8IZC7 436 aa12.87□□□□□ -0.35
DDX39A-221ENST00000593026 OR10S1Q8NGN2 331 aa12.87□□□□□ -0.35
DDX39A-221ENST00000593026 ST7LQ8TDW4 575 aa12.87□□□□□ -0.35
DDX39A-221ENST00000593026 UBE2FQ969M7 185 aa12.87□□□□□ -0.35
DDX39A-221ENST00000593026 SLAMF6Q96DU3 332 aa12.87□□□□□ -0.35
DDX39A-221ENST00000593026 C4orf45Q96LM5 186 aa12.87□□□□□ -0.35
DDX39A-221ENST00000593026 TRAF4Q9BUZ4 470 aaPredicted RBP12.87□□□□□ -0.35
DDX39A-221ENST00000593026 CXorf56Q9H5V9 222 aa12.87□□□□□ -0.35
DDX39A-221ENST00000593026 ELOVL3Q9HB03 270 aa12.87□□□□□ -0.35
DDX39A-221ENST00000593026 PNRC2Q9NPJ4 139 aaKnown RBP12.87□□□□□ -0.35
DDX39A-221ENST00000593026 CBLN4Q9NTU7 201 aa12.87□□□□□ -0.35
DDX39A-221ENST00000593026 DNAJC27Q9NZQ0 273 aa12.87□□□□□ -0.35
DDX39A-221ENST00000593026 GRIP1Q9Y3R0 1128 aa12.87□□□□□ -0.35
DDX39A-221ENST00000593026 CMAHPQ9Y471 501 aa12.87□□□□□ -0.35
DDX39A-221ENST00000593026 DSCAMO60469 2012 aa12.87□□□□□ -0.35
DDX39A-221ENST00000593026 ZNF878C9JN71 531 aa12.86□□□□□ -0.35
DDX39A-221ENST00000593026 SLC16A6O15403 523 aa12.86□□□□□ -0.35
DDX39A-221ENST00000593026 RRP9O43818 475 aaKnown RBP12.86□□□□□ -0.35
DDX39A-221ENST00000593026 CD8AP01732 235 aa12.86□□□□□ -0.35
DDX39A-221ENST00000593026 MRPL3P09001 348 aaKnown RBP12.86□□□□□ -0.35
DDX39A-221ENST00000593026 DBHP09172 617 aa12.86□□□□□ -0.35
DDX39A-221ENST00000593026 HTR1FP30939 366 aa12.86□□□□□ -0.35
DDX39A-221ENST00000593026 RGS6P49758 472 aa12.86□□□□□ -0.35
DDX39A-221ENST00000593026 SNRPGP62308 76 aaKnown RBP12.86□□□□□ -0.35
DDX39A-221ENST00000593026 GGTLC2Q14390 218 aa12.86□□□□□ -0.35
DDX39A-221ENST00000593026 RGS7BPQ6MZT1 257 aaPredicted RBP12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms