RNA–Protein interactions for RNA: ENST00000592391.5

DDX39A-217, Transcript of DExD-box helicase 39A, humanhuman

TSL 5

Gene DDX39A, Length 1,080 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-217ENST00000592391 LOXL1Q08397 574 aaPredicted RBP12.43□□□□□ -0.42
DDX39A-217ENST00000592391 CARTPTQ16568 116 aa12.43□□□□□ -0.42
DDX39A-217ENST00000592391 MOGQ16653 247 aa12.43□□□□□ -0.42
DDX39A-217ENST00000592391 SPATA46Q5T0L3 261 aa12.43□□□□□ -0.42
DDX39A-217ENST00000592391 MBNL2Q5VZF2 373 aaKnown RBP12.43□□□□□ -0.42
DDX39A-217ENST00000592391 SLC37A3Q8NCC5 494 aa12.43□□□□□ -0.42
DDX39A-217ENST00000592391 OR2T4Q8NH00 348 aa12.43□□□□□ -0.42
DDX39A-217ENST00000592391 OR1F12Q8NHA8 337 aa12.43□□□□□ -0.42
DDX39A-217ENST00000592391 SLC25A40Q8TBP6 338 aa12.43□□□□□ -0.42
DDX39A-217ENST00000592391 TEX47Q8TBZ9 253 aa12.43□□□□□ -0.42
DDX39A-217ENST00000592391 KLF14Q8TD94 323 aaPredicted RBP12.43□□□□□ -0.42
DDX39A-217ENST00000592391 PIMREGQ9BSJ6 248 aa12.43□□□□□ -0.42
DDX39A-217ENST00000592391 RBM4Q9BWF3 364 aaKnown RBP12.43□□□□□ -0.42
DDX39A-217ENST00000592391 OR2J1Q9GZK6 312 aa12.43□□□□□ -0.42
DDX39A-217ENST00000592391 HDHD2Q9H0R4 259 aa12.43□□□□□ -0.42
DDX39A-217ENST00000592391 TBCCD1Q9NVR7 557 aa12.43□□□□□ -0.42
DDX39A-217ENST00000592391 CSPG4Q6UVK1 2322 aa12.43□□□□□ -0.42
DDX39A-217ENST00000592391 H3BN98 237 aa12.42□□□□□ -0.42
DDX39A-217ENST00000592391 DEAF1O75398 565 aaPredicted RBP12.42□□□□□ -0.42
DDX39A-217ENST00000592391 TIPRLO75663 272 aa12.42□□□□□ -0.42
DDX39A-217ENST00000592391 IFNGP01579 166 aa12.42□□□□□ -0.42
DDX39A-217ENST00000592391 HLA-DQA2P01906 255 aa12.42□□□□□ -0.42
DDX39A-217ENST00000592391 GCH1P30793 250 aa12.42□□□□□ -0.42
DDX39A-217ENST00000592391 PYCR1P32322 319 aa12.42□□□□□ -0.42
DDX39A-217ENST00000592391 MPV17P39210 176 aa12.42□□□□□ -0.42
DDX39A-217ENST00000592391 NR4A2P43354 598 aa12.42□□□□□ -0.42
DDX39A-217ENST00000592391 CRMP1Q14194 572 aa12.42□□□□□ -0.42
DDX39A-217ENST00000592391 ALKBH6Q3KRA9 238 aa12.42□□□□□ -0.42
DDX39A-217ENST00000592391 C1orf146Q5VVC0 180 aa12.42□□□□□ -0.42
DDX39A-217ENST00000592391 SLC18B1Q6NT16 456 aa12.42□□□□□ -0.42
DDX39A-217ENST00000592391 CORO6Q6QEF8 472 aa12.42□□□□□ -0.42
DDX39A-217ENST00000592391 HS3ST5Q8IZT8 346 aa12.42□□□□□ -0.42
DDX39A-217ENST00000592391 ZNF786Q8N393 782 aa12.42□□□□□ -0.42
DDX39A-217ENST00000592391 ZNF540Q8NDQ6 660 aa12.42□□□□□ -0.42
DDX39A-217ENST00000592391 PROKR2Q8NFJ6 384 aa12.42□□□□□ -0.42
DDX39A-217ENST00000592391 UBASH3BQ8TF42 649 aa12.42□□□□□ -0.42
DDX39A-217ENST00000592391 SNX33Q8WV41 574 aa12.42□□□□□ -0.42
DDX39A-217ENST00000592391 SLC7A6Q92536 515 aa12.42□□□□□ -0.42
DDX39A-217ENST00000592391 COQ7Q99807 217 aa12.42□□□□□ -0.42
DDX39A-217ENST00000592391 CDADC1Q9BWV3 514 aa12.42□□□□□ -0.42
DDX39A-217ENST00000592391 NMNAT2Q9BZQ4 307 aa12.42□□□□□ -0.42
DDX39A-217ENST00000592391 ZNF556Q9HAH1 456 aa12.42□□□□□ -0.42
DDX39A-217ENST00000592391 NTN4Q9HB63 628 aa12.42□□□□□ -0.42
DDX39A-217ENST00000592391 HINT3Q9NQE9 182 aaKnown RBP12.42□□□□□ -0.42
DDX39A-217ENST00000592391 MRPL22Q9NWU5 206 aaKnown RBP12.42□□□□□ -0.42
DDX39A-217ENST00000592391 CYB5R1Q9UHQ9 305 aa12.42□□□□□ -0.42
DDX39A-217ENST00000592391 KCNG2Q9UJ96 466 aa12.42□□□□□ -0.42
DDX39A-217ENST00000592391 C2CD3Q4AC94 2353 aa12.42□□□□□ -0.42
DDX39A-217ENST00000592391 NF1P21359 2839 aa12.42□□□□□ -0.42
DDX39A-217ENST00000592391 RIIAD1A6NNX1 92 aa12.41□□□□□ -0.42
DDX39A-217ENST00000592391 C17orf100A8MU93 164 aa12.41□□□□□ -0.42
DDX39A-217ENST00000592391 MT-ND5P03915 603 aa12.41□□□□□ -0.42
DDX39A-217ENST00000592391 ANXA8P13928 327 aa12.41□□□□□ -0.42
DDX39A-217ENST00000592391 USF1P22415 310 aaPredicted RBP12.41□□□□□ -0.42
DDX39A-217ENST00000592391 PRKACGP22612 351 aa12.41□□□□□ -0.42
DDX39A-217ENST00000592391 TUBG1P23258 451 aa12.41□□□□□ -0.42
DDX39A-217ENST00000592391 GIFP27352 417 aa12.41□□□□□ -0.42
DDX39A-217ENST00000592391 GGT2P36268 569 aa12.41□□□□□ -0.42
DDX39A-217ENST00000592391 SLC25A1P53007 311 aa12.41□□□□□ -0.42
DDX39A-217ENST00000592391 ELFN2Q5R3F8 820 aa12.41□□□□□ -0.42
DDX39A-217ENST00000592391 SLC27A4Q6P1M0 643 aa12.41□□□□□ -0.42
DDX39A-217ENST00000592391 TMEM154Q6P9G4 183 aa12.41□□□□□ -0.42
DDX39A-217ENST00000592391 SHQ1Q6PI26 577 aaKnown RBP12.41□□□□□ -0.42
DDX39A-217ENST00000592391 LINC00346Q8IVM7 164 aa12.41□□□□□ -0.42
DDX39A-217ENST00000592391 IQCF1Q8N6M8 205 aa12.41□□□□□ -0.42
DDX39A-217ENST00000592391 OR9Q1Q8NGQ5 310 aa12.41□□□□□ -0.42
DDX39A-217ENST00000592391 ZNRF4Q8WWF5 429 aa12.41□□□□□ -0.42
DDX39A-217ENST00000592391 IPCEF1Q8WWN9 437 aaPredicted RBP12.41□□□□□ -0.42
DDX39A-217ENST00000592391 UTP4Q969X6 686 aaKnown RBP12.41□□□□□ -0.42
DDX39A-217ENST00000592391 NRBF2Q96F24 287 aa12.41□□□□□ -0.42
DDX39A-217ENST00000592391 DCLRE1CQ96SD1 692 aaKnown RBP12.41□□□□□ -0.42
DDX39A-217ENST00000592391 TUBG2Q9NRH3 451 aa12.41□□□□□ -0.42
DDX39A-217ENST00000592391 CMC2Q9NRP2 79 aa12.41□□□□□ -0.42
DDX39A-217ENST00000592391 GRIP1Q9Y3R0 1128 aa12.41□□□□□ -0.42
DDX39A-217ENST00000592391 TLN2Q9Y4G6 2542 aa12.41□□□□□ -0.42
DDX39A-217ENST00000592391 CR1P17927 2039 aa12.4□□□□□ -0.42
DDX39A-217ENST00000592391 J3QW42 95 aa12.4□□□□□ -0.42
DDX39A-217ENST00000592391 HPXP02790 462 aa12.4□□□□□ -0.42
DDX39A-217ENST00000592391 DBHP09172 617 aa12.4□□□□□ -0.42
DDX39A-217ENST00000592391 OSMP13725 252 aa12.4□□□□□ -0.42
DDX39A-217ENST00000592391 ZNF823P16415 610 aa12.4□□□□□ -0.42
DDX39A-217ENST00000592391 ZNF3P17036 446 aa12.4□□□□□ -0.42
DDX39A-217ENST00000592391 SPI1P17947 270 aa12.4□□□□□ -0.42
DDX39A-217ENST00000592391 POU1F1P28069 291 aa12.4□□□□□ -0.42
DDX39A-217ENST00000592391 GRK5P34947 590 aa12.4□□□□□ -0.42
DDX39A-217ENST00000592391 CCNIQ14094 377 aa12.4□□□□□ -0.42
DDX39A-217ENST00000592391 TMEM249Q2WGJ8 235 aa12.4□□□□□ -0.42
DDX39A-217ENST00000592391 PCGF3Q3KNV8 242 aa12.4□□□□□ -0.42
DDX39A-217ENST00000592391 TMEM255AQ5JRV8 349 aa12.4□□□□□ -0.42
DDX39A-217ENST00000592391 CFAP77Q6ZQR2 320 aa12.4□□□□□ -0.42
DDX39A-217ENST00000592391 ASRGL1Q7L266 308 aa12.4□□□□□ -0.42
DDX39A-217ENST00000592391 ATG16L2Q8NAA4 619 aa12.4□□□□□ -0.42
DDX39A-217ENST00000592391 OR51L1Q8NGJ5 315 aa12.4□□□□□ -0.42
DDX39A-217ENST00000592391 OR2AJ1Q8NGZ0 328 aa12.4□□□□□ -0.42
DDX39A-217ENST00000592391 DNAJC9Q8WXX5 260 aa12.4□□□□□ -0.42
DDX39A-217ENST00000592391 DUS3LQ96G46 650 aaKnown RBP12.4□□□□□ -0.42
DDX39A-217ENST00000592391 COG8Q96MW5 612 aa12.4□□□□□ -0.42
DDX39A-217ENST00000592391 BPESC1Q9GZL8 116 aa12.4□□□□□ -0.42
DDX39A-217ENST00000592391 NKIRAS2Q9NYR9 191 aa12.4□□□□□ -0.42
DDX39A-217ENST00000592391 NSD1Q96L73 2696 aaPredicted RBP12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms