RNA–Protein interactions for RNA: ENST00000590347.5

CIRBP-228, Transcript of cold inducible RNA binding protein, human

TSL 2

Gene CIRBP, Length 3,117 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CIRBP-228	ENST00000590347	CMKLR1	Q99788	373 aa		13.7	□□□□□ -0.22
CIRBP-228	ENST00000590347	MED31	Q9Y3C7	131 aa		13.7	□□□□□ -0.22
CIRBP-228	ENST00000590347	IFNL4	K9M1U5	179 aa		13.69	□□□□□ -0.22
CIRBP-228	ENST00000590347	PPP1R2P9	O14990	202 aa		13.69	□□□□□ -0.22
CIRBP-228	ENST00000590347	CRABP1	P29762	137 aa		13.69	□□□□□ -0.22
CIRBP-228	ENST00000590347	RAB32	Q13637	225 aa		13.69	□□□□□ -0.22
CIRBP-228	ENST00000590347	CNKSR3	Q6P9H4	555 aa		13.69	□□□□□ -0.22
CIRBP-228	ENST00000590347	ANKRD33	Q7Z3H0	272 aa		13.69	□□□□□ -0.22
CIRBP-228	ENST00000590347	OR10AD1	Q8NGE0	317 aa		13.69	□□□□□ -0.22
CIRBP-228	ENST00000590347	C2orf15	Q8WU43	125 aa	Known RBP	13.69	□□□□□ -0.22
CIRBP-228	ENST00000590347	ADAD1	Q96M93	576 aa	Known RBP	13.69	□□□□□ -0.22
CIRBP-228	ENST00000590347	MESP1	Q9BRJ9	268 aa		13.69	□□□□□ -0.22
CIRBP-228	ENST00000590347	PRSS16	Q9NQE7	514 aa		13.69	□□□□□ -0.22
CIRBP-228	ENST00000590347	TM7SF3	Q9NS93	570 aa		13.69	□□□□□ -0.22
CIRBP-228	ENST00000590347	TBX21	Q9UL17	535 aa		13.69	□□□□□ -0.22
CIRBP-228	ENST00000590347	HIDE1	A8MVS5	230 aa		13.69	□□□□□ -0.22
CIRBP-228	ENST00000590347		F8VVB4	439 aa		13.69	□□□□□ -0.22
CIRBP-228	ENST00000590347		F8VWA3	439 aa		13.69	□□□□□ -0.22
CIRBP-228	ENST00000590347	HIST1H2BK	O60814	126 aa		13.69	□□□□□ -0.22
CIRBP-228	ENST00000590347	HIST1H2BJ	P06899	126 aa		13.69	□□□□□ -0.22
CIRBP-228	ENST00000590347	NPS	P0C0P6	89 aa		13.69	□□□□□ -0.22
CIRBP-228	ENST00000590347	KLK2	P20151	261 aa		13.69	□□□□□ -0.22
CIRBP-228	ENST00000590347	HIST1H2BO	P23527	126 aa		13.69	□□□□□ -0.22
CIRBP-228	ENST00000590347	HIST1H2BB	P33778	126 aa		13.69	□□□□□ -0.22
CIRBP-228	ENST00000590347	GNG10	P50151	68 aa		13.69	□□□□□ -0.22
CIRBP-228	ENST00000590347	METAP1	P53582	386 aa		13.69	□□□□□ -0.22
CIRBP-228	ENST00000590347	DVL1P1	P54792	670 aa	Predicted RBP	13.69	□□□□□ -0.22
CIRBP-228	ENST00000590347	HIST1H2BD	P58876	126 aa		13.69	□□□□□ -0.22
CIRBP-228	ENST00000590347	NUTF2	P61970	127 aa	Known RBP	13.69	□□□□□ -0.22
CIRBP-228	ENST00000590347	HIST1H2BC	P62807	126 aa		13.69	□□□□□ -0.22
CIRBP-228	ENST00000590347	RAP1A	P62834	184 aa		13.69	□□□□□ -0.22
CIRBP-228	ENST00000590347	NTHL1	P78549	312 aa		13.69	□□□□□ -0.22
CIRBP-228	ENST00000590347	HIST2H2BE	Q16778	126 aa		13.69	□□□□□ -0.22
CIRBP-228	ENST00000590347	FAM78A	Q5JUQ0	283 aa		13.69	□□□□□ -0.22
CIRBP-228	ENST00000590347	HIST2H2BF	Q5QNW6	126 aa	Predicted RBP	13.69	□□□□□ -0.22
CIRBP-228	ENST00000590347	PLPP4	Q5VZY2	271 aa		13.69	□□□□□ -0.22
CIRBP-228	ENST00000590347	FCRL6	Q6DN72	434 aa		13.69	□□□□□ -0.22
CIRBP-228	ENST00000590347	C19orf47	Q8N9M1	422 aa	Known RBP	13.69	□□□□□ -0.22
CIRBP-228	ENST00000590347	ZNF784	Q8NCA9	323 aa	Predicted RBP	13.69	□□□□□ -0.22
CIRBP-228	ENST00000590347	HIST1H2BH	Q93079	126 aa		13.69	□□□□□ -0.22
CIRBP-228	ENST00000590347	MRGPRF	Q96AM1	343 aa		13.69	□□□□□ -0.22
CIRBP-228	ENST00000590347	CMTM3	Q96MX0	182 aa		13.69	□□□□□ -0.22
CIRBP-228	ENST00000590347	HIST1H2BN	Q99877	126 aa		13.69	□□□□□ -0.22
CIRBP-228	ENST00000590347	HIST1H2BM	Q99879	126 aa		13.69	□□□□□ -0.22
CIRBP-228	ENST00000590347	HCFC2	Q9Y5Z7	792 aa		13.69	□□□□□ -0.22
CIRBP-228	ENST00000590347	ZNF735	P0CB33	412 aa		13.68	□□□□□ -0.22
CIRBP-228	ENST00000590347	SNRPD1	P62314	119 aa	Known RBP	13.68	□□□□□ -0.22
CIRBP-228	ENST00000590347	METTL27	Q8N6F8	245 aa	Predicted RBP	13.68	□□□□□ -0.22
CIRBP-228	ENST00000590347	ADAMTS17	Q8TE56	1095 aa		13.68	□□□□□ -0.22
CIRBP-228	ENST00000590347	PHYHIP	Q92561	330 aa		13.68	□□□□□ -0.22
CIRBP-228	ENST00000590347	TFG	Q92734	400 aa	Predicted RBP	13.68	□□□□□ -0.22
CIRBP-228	ENST00000590347	PLD4	Q96BZ4	506 aa		13.68	□□□□□ -0.22
CIRBP-228	ENST00000590347	IL21	Q9HBE4	155 aa		13.68	□□□□□ -0.22
CIRBP-228	ENST00000590347	SLC22A13	Q9Y226	551 aa		13.68	□□□□□ -0.22
CIRBP-228	ENST00000590347	C8A	P07357	584 aa		13.68	□□□□□ -0.22
CIRBP-228	ENST00000590347	CCR2	P41597	374 aa		13.68	□□□□□ -0.22
CIRBP-228	ENST00000590347	ASCL1	P50553	236 aa		13.68	□□□□□ -0.22
CIRBP-228	ENST00000590347	TNFRSF9	Q07011	255 aa		13.68	□□□□□ -0.22
CIRBP-228	ENST00000590347	GUK1	Q16774	197 aa		13.68	□□□□□ -0.22
CIRBP-228	ENST00000590347	DMRTC1	Q5HYR2	192 aa		13.68	□□□□□ -0.22
CIRBP-228	ENST00000590347	OR2T2	Q6IF00	324 aa		13.68	□□□□□ -0.22
CIRBP-228	ENST00000590347	FAM174A	Q8TBP5	190 aa		13.68	□□□□□ -0.22
CIRBP-228	ENST00000590347	GAL3ST4	Q96RP7	486 aa		13.68	□□□□□ -0.22
CIRBP-228	ENST00000590347	KXD1	Q9BQD3	176 aa		13.68	□□□□□ -0.22
CIRBP-228	ENST00000590347	KPTN	Q9Y664	436 aa		13.68	□□□□□ -0.22
CIRBP-228	ENST00000590347	FANCM	Q8IYD8	2048 aa		13.68	□□□□□ -0.22
CIRBP-228	ENST00000590347	CYB5B	O43169	146 aa		13.68	□□□□□ -0.22
CIRBP-228	ENST00000590347	STK17B	O94768	372 aa		13.68	□□□□□ -0.22
CIRBP-228	ENST00000590347	LRG1	P02750	347 aa		13.68	□□□□□ -0.22
CIRBP-228	ENST00000590347	GIMD1	P0DJR0	217 aa		13.68	□□□□□ -0.22
CIRBP-228	ENST00000590347	ADRB3	P13945	408 aa		13.68	□□□□□ -0.22
CIRBP-228	ENST00000590347	ELOC	Q15369	112 aa		13.68	□□□□□ -0.22
CIRBP-228	ENST00000590347	ZNF550	Q7Z398	422 aa		13.68	□□□□□ -0.22
CIRBP-228	ENST00000590347	KDM8	Q8N371	416 aa		13.68	□□□□□ -0.22
CIRBP-228	ENST00000590347	GPX8	Q8TED1	209 aa		13.68	□□□□□ -0.22
CIRBP-228	ENST00000590347	GLYATL1	Q969I3	302 aa		13.68	□□□□□ -0.22
CIRBP-228	ENST00000590347	RARRES2	Q99969	163 aa		13.68	□□□□□ -0.22
CIRBP-228	ENST00000590347	KCNE5	Q9UJ90	142 aa		13.68	□□□□□ -0.22
CIRBP-228	ENST00000590347	GEMIN2	O14893	280 aa	Known RBP	13.67	□□□□□ -0.22
CIRBP-228	ENST00000590347	GLCE	O94923	617 aa		13.67	□□□□□ -0.22
CIRBP-228	ENST00000590347	SCAF4	O95104	1147 aa	Known RBP	13.67	□□□□□ -0.22
CIRBP-228	ENST00000590347	RNH1	P13489	461 aa	Known RBP	13.67	□□□□□ -0.22
CIRBP-228	ENST00000590347	HRH1	P35367	487 aa		13.67	□□□□□ -0.22
CIRBP-228	ENST00000590347	RNASE10	Q5GAN6	216 aa	Known RBP	13.67	□□□□□ -0.22
CIRBP-228	ENST00000590347	FAM46C	Q5VWP2	391 aa		13.67	□□□□□ -0.22
CIRBP-228	ENST00000590347	ARHGAP11A	Q6P4F7	1023 aa		13.67	□□□□□ -0.22
CIRBP-228	ENST00000590347	SLC35D2	Q76EJ3	337 aa		13.67	□□□□□ -0.22
CIRBP-228	ENST00000590347	JAGN1	Q8N5M9	183 aa		13.67	□□□□□ -0.22
CIRBP-228	ENST00000590347	ZCCHC10	Q8TBK6	192 aa		13.67	□□□□□ -0.22
CIRBP-228	ENST00000590347	CYB5D2	Q8WUJ1	264 aa		13.67	□□□□□ -0.22
CIRBP-228	ENST00000590347	RNF166	Q96A37	237 aa	Predicted RBP	13.67	□□□□□ -0.22
CIRBP-228	ENST00000590347	SNX22	Q96L94	193 aa		13.67	□□□□□ -0.22
CIRBP-228	ENST00000590347	C2orf88	Q9BSF0	95 aa		13.67	□□□□□ -0.22
CIRBP-228	ENST00000590347	CFHR5	Q9BXR6	569 aa		13.67	□□□□□ -0.22
CIRBP-228	ENST00000590347	OR52A5	Q9H2C5	316 aa		13.67	□□□□□ -0.22
CIRBP-228	ENST00000590347	MPDZ	O75970	2070 aa		13.67	□□□□□ -0.22
CIRBP-228	ENST00000590347	RDH16	O75452	317 aa		13.67	□□□□□ -0.22
CIRBP-228	ENST00000590347	IFNG	P01579	166 aa		13.67	□□□□□ -0.22
CIRBP-228	ENST00000590347	TLX1	P31314	330 aa	Predicted RBP	13.67	□□□□□ -0.22
CIRBP-228	ENST00000590347	IL2RG	P31785	369 aa		13.67	□□□□□ -0.22

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