RNA–Protein interactions for RNA: ENST00000589823.6

VMP1-210, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 580 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-210ENST00000589823 SYNGR3O43761 229 aa11.83□□□□□ -0.52
VMP1-210ENST00000589823 FAM20BO75063 409 aa11.83□□□□□ -0.52
VMP1-210ENST00000589823 FADS2O95864 444 aaKnown RBP11.83□□□□□ -0.52
VMP1-210ENST00000589823 CD3EP07766 207 aa11.83□□□□□ -0.52
VMP1-210ENST00000589823 CELA3BP08861 270 aa11.83□□□□□ -0.52
VMP1-210ENST00000589823 OR2T7P0C7T2 308 aa11.83□□□□□ -0.52
VMP1-210ENST00000589823 APEX1P27695 318 aaKnown RBP11.83□□□□□ -0.52
VMP1-210ENST00000589823 HCCSP53701 268 aa11.83□□□□□ -0.52
VMP1-210ENST00000589823 BSPH1Q075Z2 132 aa11.83□□□□□ -0.52
VMP1-210ENST00000589823 RAB40BQ12829 278 aa11.83□□□□□ -0.52
VMP1-210ENST00000589823 ECH1Q13011 328 aa11.83□□□□□ -0.52
VMP1-210ENST00000589823 DAZAP2Q15038 168 aaPredicted RBP11.83□□□□□ -0.52
VMP1-210ENST00000589823 TAF13Q15543 124 aa11.83□□□□□ -0.52
VMP1-210ENST00000589823 C6orf141Q5SZD1 244 aa11.83□□□□□ -0.52
VMP1-210ENST00000589823 NCMAPQ5T1S8 102 aa11.83□□□□□ -0.52
VMP1-210ENST00000589823 KCTD18Q6PI47 426 aaPredicted RBP11.83□□□□□ -0.52
VMP1-210ENST00000589823 ZNF584Q8IVC4 421 aa11.83□□□□□ -0.52
VMP1-210ENST00000589823 CPEB3Q8NE35 698 aaKnown RBP11.83□□□□□ -0.52
VMP1-210ENST00000589823 OR10H4Q8NGA5 316 aa11.83□□□□□ -0.52
VMP1-210ENST00000589823 OR4F15Q8NGB8 312 aa11.83□□□□□ -0.52
VMP1-210ENST00000589823 OR2T27Q8NH04 317 aa11.83□□□□□ -0.52
VMP1-210ENST00000589823 OR1F12Q8NHA8 337 aa11.83□□□□□ -0.52
VMP1-210ENST00000589823 ST7LQ8TDW4 575 aa11.83□□□□□ -0.52
VMP1-210ENST00000589823 SMAP2Q8WU79 429 aaPredicted RBP11.83□□□□□ -0.52
VMP1-210ENST00000589823 ASB17Q8WXJ9 295 aa11.83□□□□□ -0.52
VMP1-210ENST00000589823 MAP6Q96JE9 813 aa11.83□□□□□ -0.52
VMP1-210ENST00000589823 TBX5Q99593 518 aa11.83□□□□□ -0.52
VMP1-210ENST00000589823 ATF6BQ99941 703 aa11.83□□□□□ -0.52
VMP1-210ENST00000589823 COPS4Q9BT78 406 aa11.83□□□□□ -0.52
VMP1-210ENST00000589823 ABHD6Q9BV23 337 aa11.83□□□□□ -0.52
VMP1-210ENST00000589823 CDH20Q9HBT6 801 aa11.83□□□□□ -0.52
VMP1-210ENST00000589823 MRPS18AQ9NVS2 196 aaKnown RBP11.83□□□□□ -0.52
VMP1-210ENST00000589823 EXOGQ9Y2C4 368 aaKnown RBP11.83□□□□□ -0.52
VMP1-210ENST00000589823 ADGRG4Q8IZF6 3080 aa11.83□□□□□ -0.52
VMP1-210ENST00000589823 ANKHD1Q8IWZ3 2542 aaKnown RBP11.83□□□□□ -0.52
VMP1-210ENST00000589823 C5orf49A4QMS7 147 aa11.82□□□□□ -0.52
VMP1-210ENST00000589823 OR6C6A6NF89 314 aa11.82□□□□□ -0.52
VMP1-210ENST00000589823 EFCAB10A6NFE3 127 aa11.82□□□□□ -0.52
VMP1-210ENST00000589823 A6NNC1 897 aa11.82□□□□□ -0.52
VMP1-210ENST00000589823 DEFB108AA8MXU0 73 aa11.82□□□□□ -0.52
VMP1-210ENST00000589823 ABCD4O14678 606 aa11.82□□□□□ -0.52
VMP1-210ENST00000589823 H2BFMP0C1H6 154 aa11.82□□□□□ -0.52
VMP1-210ENST00000589823 ALOX5APP20292 161 aa11.82□□□□□ -0.52
VMP1-210ENST00000589823 CCNOP22674 350 aa11.82□□□□□ -0.52
VMP1-210ENST00000589823 COL8A1P27658 744 aa11.82□□□□□ -0.52
VMP1-210ENST00000589823 SLC15A1P46059 708 aa11.82□□□□□ -0.52
VMP1-210ENST00000589823 CXCR4P61073 352 aa11.82□□□□□ -0.52
VMP1-210ENST00000589823 ACTC1P68032 377 aa11.82□□□□□ -0.52
VMP1-210ENST00000589823 ACTA1P68133 377 aa11.82□□□□□ -0.52
VMP1-210ENST00000589823 NAAAQ02083 359 aa11.82□□□□□ -0.52
VMP1-210ENST00000589823 MED21Q13503 144 aa11.82□□□□□ -0.52
VMP1-210ENST00000589823 MYPOPQ86VE0 399 aaPredicted RBP11.82□□□□□ -0.52
VMP1-210ENST00000589823 HIST2H2ABQ8IUE6 130 aaPredicted RBP11.82□□□□□ -0.52
VMP1-210ENST00000589823 RADILQ96JH8 1075 aa11.82□□□□□ -0.52
VMP1-210ENST00000589823 POM121L2Q96KW2 1035 aa11.82□□□□□ -0.52
VMP1-210ENST00000589823 PLCXD1Q9NUJ7 323 aa11.82□□□□□ -0.52
VMP1-210ENST00000589823 SCN3BQ9NY72 215 aa11.82□□□□□ -0.52
VMP1-210ENST00000589823 COPS3Q9UNS2 423 aa11.82□□□□□ -0.52
VMP1-210ENST00000589823 COL12A1Q99715 3063 aa11.82□□□□□ -0.52
VMP1-210ENST00000589823 LOC100509620A0A075B734 347 aa11.81□□□□□ -0.52
VMP1-210ENST00000589823 IGHV2OR16-5A0A0B4J2B6 119 aa11.81□□□□□ -0.52
VMP1-210ENST00000589823 A0A1W2PQL4 384 aaPredicted RBP11.81□□□□□ -0.52
VMP1-210ENST00000589823 DAPL1A0PJW8 107 aa11.81□□□□□ -0.52
VMP1-210ENST00000589823 SLC1A7O00341 560 aa11.81□□□□□ -0.52
VMP1-210ENST00000589823 XPNPEP2O43895 674 aa11.81□□□□□ -0.52
VMP1-210ENST00000589823 CCL2P13500 99 aa11.81□□□□□ -0.52
VMP1-210ENST00000589823 HSD11B1P28845 292 aa11.81□□□□□ -0.52
VMP1-210ENST00000589823 GRB2P62993 217 aaKnown RBP11.81□□□□□ -0.52
VMP1-210ENST00000589823 GALK2Q01415 458 aa11.81□□□□□ -0.52
VMP1-210ENST00000589823 LAIR2Q6ISS4 152 aa11.81□□□□□ -0.52
VMP1-210ENST00000589823 ARL9Q6T311 187 aa11.81□□□□□ -0.52
VMP1-210ENST00000589823 SLC22A25Q6T423 547 aa11.81□□□□□ -0.52
VMP1-210ENST00000589823 ZNF322Q6U7Q0 402 aaPredicted RBP11.81□□□□□ -0.52
VMP1-210ENST00000589823 SPATC1Q76KD6 591 aa11.81□□□□□ -0.52
VMP1-210ENST00000589823 RHOUQ7L0Q8 258 aa11.81□□□□□ -0.52
VMP1-210ENST00000589823 KRT77Q7Z794 578 aa11.81□□□□□ -0.52
VMP1-210ENST00000589823 ZNF786Q8N393 782 aa11.81□□□□□ -0.52
VMP1-210ENST00000589823 ACBD7Q8N6N7 88 aa11.81□□□□□ -0.52
VMP1-210ENST00000589823 ZNF540Q8NDQ6 660 aa11.81□□□□□ -0.52
VMP1-210ENST00000589823 OR52I1Q8NGK6 324 aa11.81□□□□□ -0.52
VMP1-210ENST00000589823 OR10S1Q8NGN2 331 aa11.81□□□□□ -0.52
VMP1-210ENST00000589823 RNF133Q8WVZ7 376 aa11.81□□□□□ -0.52
VMP1-210ENST00000589823 GGHQ92820 318 aa11.81□□□□□ -0.52
VMP1-210ENST00000589823 SPTSSAQ969W0 71 aa11.81□□□□□ -0.52
VMP1-210ENST00000589823 MRPL48Q96GC5 212 aaKnown RBP11.81□□□□□ -0.52
VMP1-210ENST00000589823 DCLRE1CQ96SD1 692 aaKnown RBP11.81□□□□□ -0.52
VMP1-210ENST00000589823 AMELYQ99218 206 aa11.81□□□□□ -0.52
VMP1-210ENST00000589823 MYCBPQ99417 103 aaPredicted RBP11.81□□□□□ -0.52
VMP1-210ENST00000589823 TTTY10Q9BZA0 68 aa11.81□□□□□ -0.52
VMP1-210ENST00000589823 PNRC2Q9NPJ4 139 aaKnown RBP11.81□□□□□ -0.52
VMP1-210ENST00000589823 INPP5EQ9NRR6 644 aa11.81□□□□□ -0.52
VMP1-210ENST00000589823 DDX28Q9NUL7 540 aaKnown RBP11.81□□□□□ -0.52
VMP1-210ENST00000589823 CNOT2Q9NZN8 540 aaKnown RBP11.81□□□□□ -0.52
VMP1-210ENST00000589823 EIF3KQ9UBQ5 218 aaKnown RBP11.81□□□□□ -0.52
VMP1-210ENST00000589823 IKZF2Q9UKS7 526 aa11.81□□□□□ -0.52
VMP1-210ENST00000589823 KLHDC2Q9Y2U9 406 aa11.81□□□□□ -0.52
VMP1-210ENST00000589823 TPRKBQ9Y3C4 175 aa11.81□□□□□ -0.52
VMP1-210ENST00000589823 RNF115Q9Y4L5 304 aa11.81□□□□□ -0.52
VMP1-210ENST00000589823 SPEF1Q9Y4P9 236 aa11.81□□□□□ -0.52
VMP1-210ENST00000589823 F5H5K5 113 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms