RNA–Protein interactions for RNA: ENST00000589677.5

SMARCA4-214, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SMARCA4, Length 5,181 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-214ENST00000589677 ZNF787Q6DD87 383 aa13.35□□□□□ -0.27
SMARCA4-214ENST00000589677 DOK3Q7L591 496 aa13.35□□□□□ -0.27
SMARCA4-214ENST00000589677 KLHDC9Q8NEP7 349 aa13.35□□□□□ -0.27
SMARCA4-214ENST00000589677 SLC35A4Q96G79 324 aa13.35□□□□□ -0.27
SMARCA4-214ENST00000589677 PLAC1Q9HBJ0 212 aa13.35□□□□□ -0.27
SMARCA4-214ENST00000589677 MIOXQ9UGB7 285 aa13.35□□□□□ -0.27
SMARCA4-214ENST00000589677 TMED7Q9Y3B3 224 aa13.35□□□□□ -0.27
SMARCA4-214ENST00000589677 G3V3Q6 166 aa13.35□□□□□ -0.27
SMARCA4-214ENST00000589677 UPK1AO00322 258 aa13.35□□□□□ -0.27
SMARCA4-214ENST00000589677 HNRNPA2B1P22626 353 aaKnown RBP13.35□□□□□ -0.27
SMARCA4-214ENST00000589677 NTSR1P30989 418 aa13.35□□□□□ -0.27
SMARCA4-214ENST00000589677 DUSP5Q16690 384 aa13.35□□□□□ -0.27
SMARCA4-214ENST00000589677 ZNF429Q86V71 674 aa13.35□□□□□ -0.27
SMARCA4-214ENST00000589677 TCTN2Q96GX1 697 aa13.35□□□□□ -0.27
SMARCA4-214ENST00000589677 JAM3Q9BX67 310 aa13.35□□□□□ -0.27
SMARCA4-214ENST00000589677 ULBP2Q9BZM5 246 aa13.35□□□□□ -0.27
SMARCA4-214ENST00000589677 NXF2Q9GZY0 626 aaKnown RBP13.35□□□□□ -0.27
SMARCA4-214ENST00000589677 SCAND1P57086 179 aa13.34□□□□□ -0.27
SMARCA4-214ENST00000589677 UBE2NP61088 152 aaKnown RBP13.34□□□□□ -0.27
SMARCA4-214ENST00000589677 ACOT6Q3I5F7 207 aaPredicted RBP13.34□□□□□ -0.27
SMARCA4-214ENST00000589677 MUC20Q8N307 709 aaPredicted RBP13.34□□□□□ -0.27
SMARCA4-214ENST00000589677 SIRT6Q8N6T7 355 aa13.34□□□□□ -0.27
SMARCA4-214ENST00000589677 NECAP1Q8NC96 275 aa13.34□□□□□ -0.27
SMARCA4-214ENST00000589677 SLC39A7Q92504 469 aa13.34□□□□□ -0.27
SMARCA4-214ENST00000589677 C19orf43Q9BQ61 176 aa13.34□□□□□ -0.27
SMARCA4-214ENST00000589677 GPR31O00270 319 aa13.34□□□□□ -0.27
SMARCA4-214ENST00000589677 RAB30Q15771 203 aa13.34□□□□□ -0.27
SMARCA4-214ENST00000589677 MANEAQ5SRI9 462 aa13.34□□□□□ -0.27
SMARCA4-214ENST00000589677 MRM1Q6IN84 353 aaKnown RBP13.34□□□□□ -0.27
SMARCA4-214ENST00000589677 OR8U1Q8NH10 309 aa13.34□□□□□ -0.27
SMARCA4-214ENST00000589677 BSCL2Q96G97 398 aaPredicted RBP13.34□□□□□ -0.27
SMARCA4-214ENST00000589677 EDEM2Q9BV94 578 aa13.34□□□□□ -0.27
SMARCA4-214ENST00000589677 SEC11CQ9BY50 192 aa13.34□□□□□ -0.27
SMARCA4-214ENST00000589677 LAMP3Q9UQV4 416 aa13.34□□□□□ -0.27
SMARCA4-214ENST00000589677 EXOGQ9Y2C4 368 aaKnown RBP13.34□□□□□ -0.27
SMARCA4-214ENST00000589677 A0A087WV62 115 aa13.34□□□□□ -0.27
SMARCA4-214ENST00000589677 GSTZ1O43708 216 aaPredicted RBP13.34□□□□□ -0.27
SMARCA4-214ENST00000589677 GSTP1P09211 210 aaKnown RBP13.34□□□□□ -0.27
SMARCA4-214ENST00000589677 P2RY2P41231 377 aa13.34□□□□□ -0.27
SMARCA4-214ENST00000589677 RUNX3Q13761 415 aa13.34□□□□□ -0.27
SMARCA4-214ENST00000589677 SAT2Q96F10 170 aaPredicted RBP13.34□□□□□ -0.27
SMARCA4-214ENST00000589677 ZNF426Q9BUY5 554 aa13.34□□□□□ -0.27
SMARCA4-214ENST00000589677 MOB1AQ9H8S9 216 aa13.34□□□□□ -0.27
SMARCA4-214ENST00000589677 MTFP1Q9UDX5 166 aa13.34□□□□□ -0.27
SMARCA4-214ENST00000589677 C19orf53Q9UNZ5 99 aaPredicted RBP13.34□□□□□ -0.27
SMARCA4-214ENST00000589677 CTDSPLO15194 276 aa13.34□□□□□ -0.27
SMARCA4-214ENST00000589677 DOK2O60496 412 aa13.34□□□□□ -0.27
SMARCA4-214ENST00000589677 IGHA2P01877 340 aa13.34□□□□□ -0.27
SMARCA4-214ENST00000589677 ELLP55199 621 aaPredicted RBP13.34□□□□□ -0.27
SMARCA4-214ENST00000589677 SLC35A1P78382 337 aa13.34□□□□□ -0.27
SMARCA4-214ENST00000589677 FAM24BQ8N5W8 94 aa13.34□□□□□ -0.27
SMARCA4-214ENST00000589677 OR4C5Q8NGB2 326 aa13.34□□□□□ -0.27
SMARCA4-214ENST00000589677 USB1Q9BQ65 265 aaKnown RBP13.34□□□□□ -0.27
SMARCA4-214ENST00000589677 SLC35B3Q9H1N7 401 aa13.34□□□□□ -0.27
SMARCA4-214ENST00000589677 PLEKHF2Q9H8W4 249 aa13.34□□□□□ -0.27
SMARCA4-214ENST00000589677 UQCC1Q9NVA1 299 aa13.34□□□□□ -0.27
SMARCA4-214ENST00000589677 A8MVM7 634 aa13.33□□□□□ -0.27
SMARCA4-214ENST00000589677 TCAPO15273 167 aa13.33□□□□□ -0.27
SMARCA4-214ENST00000589677 MSX1P28360 303 aa13.33□□□□□ -0.27
SMARCA4-214ENST00000589677 BCL6P41182 706 aa13.33□□□□□ -0.27
SMARCA4-214ENST00000589677 LGALSLQ3ZCW2 172 aaPredicted RBP13.33□□□□□ -0.27
SMARCA4-214ENST00000589677 MIDNQ504T8 468 aa13.33□□□□□ -0.27
SMARCA4-214ENST00000589677 LCN15Q6UWW0 184 aa13.33□□□□□ -0.27
SMARCA4-214ENST00000589677 GPX8Q8TED1 209 aa13.33□□□□□ -0.27
SMARCA4-214ENST00000589677 VAMP8Q9BV40 100 aa13.33□□□□□ -0.27
SMARCA4-214ENST00000589677 BANF2Q9H503 90 aa13.33□□□□□ -0.27
SMARCA4-214ENST00000589677 PARD6AQ9NPB6 346 aa13.33□□□□□ -0.27
SMARCA4-214ENST00000589677 SLC6A13Q9NSD5 602 aa13.33□□□□□ -0.27
SMARCA4-214ENST00000589677 MRPL22Q9NWU5 206 aaKnown RBP13.33□□□□□ -0.27
SMARCA4-214ENST00000589677 UTS2O95399 124 aa13.33□□□□□ -0.28
SMARCA4-214ENST00000589677 IGLV3-25P01717 112 aa13.33□□□□□ -0.28
SMARCA4-214ENST00000589677 DTYMKP23919 212 aa13.33□□□□□ -0.28
SMARCA4-214ENST00000589677 NOVA1P51513 510 aaKnown RBP13.33□□□□□ -0.28
SMARCA4-214ENST00000589677 IKZF1Q13422 519 aa13.33□□□□□ -0.28
SMARCA4-214ENST00000589677 KIAA0895LQ68EN5 471 aa13.33□□□□□ -0.28
SMARCA4-214ENST00000589677 LYPD8Q6UX82 237 aa13.33□□□□□ -0.28
SMARCA4-214ENST00000589677 MMP21Q8N119 569 aa13.33□□□□□ -0.28
SMARCA4-214ENST00000589677 SLC38A9Q8NBW4 561 aa13.33□□□□□ -0.28
SMARCA4-214ENST00000589677 A0A087X0M5 115 aa13.33□□□□□ -0.28
SMARCA4-214ENST00000589677 A0A1B0GX30 115 aa13.33□□□□□ -0.28
SMARCA4-214ENST00000589677 TCRBV21S2A2A0A5A6 115 aa13.33□□□□□ -0.28
SMARCA4-214ENST00000589677 M0R143 59 aa13.33□□□□□ -0.28
SMARCA4-214ENST00000589677 CLN5O75503 358 aa13.33□□□□□ -0.28
SMARCA4-214ENST00000589677 CTXN2P0C2S0 81 aa13.33□□□□□ -0.28
SMARCA4-214ENST00000589677 UBXN2BQ14CS0 331 aa13.33□□□□□ -0.28
SMARCA4-214ENST00000589677 ARRDC1Q8N5I2 433 aa13.33□□□□□ -0.28
SMARCA4-214ENST00000589677 LHX4Q969G2 390 aa13.33□□□□□ -0.28
SMARCA4-214ENST00000589677 UBL7Q96S82 380 aaPredicted RBP13.33□□□□□ -0.28
SMARCA4-214ENST00000589677 PDFQ9HBH1 243 aa13.33□□□□□ -0.28
SMARCA4-214ENST00000589677 SLC17A2O00624 439 aa13.33□□□□□ -0.28
SMARCA4-214ENST00000589677 SELENOPP49908 381 aa13.33□□□□□ -0.28
SMARCA4-214ENST00000589677 C17orf99Q6UX52 265 aa13.33□□□□□ -0.28
SMARCA4-214ENST00000589677 CD300LDQ6UXZ3 194 aa13.33□□□□□ -0.28
SMARCA4-214ENST00000589677 ADAMTSL4Q6UY14 1074 aa13.33□□□□□ -0.28
SMARCA4-214ENST00000589677 OR51A2Q8NGJ7 313 aa13.33□□□□□ -0.28
SMARCA4-214ENST00000589677 OR4F5Q8NH21 305 aa13.33□□□□□ -0.28
SMARCA4-214ENST00000589677 NUDCD2Q8WVJ2 157 aa13.33□□□□□ -0.28
SMARCA4-214ENST00000589677 PTP4A1Q93096 173 aa13.33□□□□□ -0.28
SMARCA4-214ENST00000589677 MARVELD3Q96A59 401 aa13.33□□□□□ -0.28
SMARCA4-214ENST00000589677 OR4F4Q96R69 305 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms