RNA–Protein interactions for RNA: ENST00000588952.5

DNMT1-216, Transcript of DNA methyltransferase 1, humanhuman

TSL 5

Gene DNMT1, Length 841 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-216ENST00000588952 SLAMF6Q96DU3 332 aa17.38■□□□□ 0.37
DNMT1-216ENST00000588952 SPOCK3Q9BQ16 436 aa17.38■□□□□ 0.37
DNMT1-216ENST00000588952 FKBP14Q9NWM8 211 aa17.38■□□□□ 0.37
DNMT1-216ENST00000588952 PAK1IP1Q9NWT1 392 aaPredicted RBP17.38■□□□□ 0.37
DNMT1-216ENST00000588952 LAMP5Q9UJQ1 280 aa17.38■□□□□ 0.37
DNMT1-216ENST00000588952 FASNP49327 2511 aaKnown RBP17.38■□□□□ 0.37
DNMT1-216ENST00000588952 ANKHD1Q8IWZ3 2542 aaKnown RBP17.38■□□□□ 0.37
DNMT1-216ENST00000588952 LOC100509620A0A075B734 347 aa17.37■□□□□ 0.37
DNMT1-216ENST00000588952 DEFB108AA8MXU0 73 aa17.37■□□□□ 0.37
DNMT1-216ENST00000588952 MAGEB4O15481 346 aaPredicted RBP17.37■□□□□ 0.37
DNMT1-216ENST00000588952 TMCC2O75069 709 aa17.37■□□□□ 0.37
DNMT1-216ENST00000588952 LYNP07948 512 aa17.37■□□□□ 0.37
DNMT1-216ENST00000588952 DBHP09172 617 aa17.37■□□□□ 0.37
DNMT1-216ENST00000588952 EPXP11678 715 aa17.37■□□□□ 0.37
DNMT1-216ENST00000588952 LOXP28300 417 aaPredicted RBP17.37■□□□□ 0.37
DNMT1-216ENST00000588952 PEX19P40855 299 aa17.37■□□□□ 0.37
DNMT1-216ENST00000588952 MED21Q13503 144 aa17.37■□□□□ 0.37
DNMT1-216ENST00000588952 RSPO1Q2MKA7 263 aaPredicted RBP17.37■□□□□ 0.37
DNMT1-216ENST00000588952 ZNF786Q8N393 782 aa17.37■□□□□ 0.37
DNMT1-216ENST00000588952 PAQR4Q8N4S7 273 aaPredicted RBP17.37■□□□□ 0.37
DNMT1-216ENST00000588952 OR1F12Q8NHA8 337 aa17.37■□□□□ 0.37
DNMT1-216ENST00000588952 FAM222BQ8WU58 562 aa17.37■□□□□ 0.37
DNMT1-216ENST00000588952 RNF133Q8WVZ7 376 aa17.37■□□□□ 0.37
DNMT1-216ENST00000588952 ZNF649Q9BS31 505 aa17.37■□□□□ 0.37
DNMT1-216ENST00000588952 FGF20Q9NP95 211 aaPredicted RBP17.37■□□□□ 0.37
DNMT1-216ENST00000588952 ICE1Q9Y2F5 2266 aa17.36■□□□□ 0.37
DNMT1-216ENST00000588952 PSMD9O00233 223 aa17.36■□□□□ 0.37
DNMT1-216ENST00000588952 IGHA1P01876 353 aa17.36■□□□□ 0.37
DNMT1-216ENST00000588952 OR2T7P0C7T2 308 aa17.36■□□□□ 0.37
DNMT1-216ENST00000588952 CD40P25942 277 aa17.36■□□□□ 0.37
DNMT1-216ENST00000588952 CALCRP30988 508 aa17.36■□□□□ 0.37
DNMT1-216ENST00000588952 HTR5AP47898 357 aa17.36■□□□□ 0.37
DNMT1-216ENST00000588952 HGFACQ04756 655 aa17.36■□□□□ 0.37
DNMT1-216ENST00000588952 BSPH1Q075Z2 132 aa17.36■□□□□ 0.37
DNMT1-216ENST00000588952 KRTAP27-1Q3LI81 207 aa17.36■□□□□ 0.37
DNMT1-216ENST00000588952 C3orf36Q3SXR2 165 aa17.36■□□□□ 0.37
DNMT1-216ENST00000588952 KLHL22Q53GT1 634 aa17.36■□□□□ 0.37
DNMT1-216ENST00000588952 SP5Q6BEB4 398 aaPredicted RBP17.36■□□□□ 0.37
DNMT1-216ENST00000588952 AHSA2Q719I0 299 aa17.36■□□□□ 0.37
DNMT1-216ENST00000588952 SSX8Q7RTT4 187 aa17.36■□□□□ 0.37
DNMT1-216ENST00000588952 SLC30A7Q8NEW0 376 aa17.36■□□□□ 0.37
DNMT1-216ENST00000588952 OR2T27Q8NH04 317 aa17.36■□□□□ 0.37
DNMT1-216ENST00000588952 POM121L2Q96KW2 1035 aa17.36■□□□□ 0.37
DNMT1-216ENST00000588952 COQ7Q99807 217 aa17.36■□□□□ 0.37
DNMT1-216ENST00000588952 HDHD2Q9H0R4 259 aa17.36■□□□□ 0.37
DNMT1-216ENST00000588952 CENPMQ9NSP4 180 aa17.36■□□□□ 0.37
DNMT1-216ENST00000588952 DDX28Q9NUL7 540 aaKnown RBP17.36■□□□□ 0.37
DNMT1-216ENST00000588952 SLCO1C1Q9NYB5 712 aa17.36■□□□□ 0.37
DNMT1-216ENST00000588952 USP9YO00507 2555 aaPredicted RBP17.35■□□□□ 0.37
DNMT1-216ENST00000588952 SPTAN1Q13813 2472 aaKnown RBP17.35■□□□□ 0.37
DNMT1-216ENST00000588952 IGHV2OR16-5A0A0B4J2B6 119 aa17.35■□□□□ 0.37
DNMT1-216ENST00000588952 IQCMA0A1B0GVH7 501 aa17.35■□□□□ 0.37
DNMT1-216ENST00000588952 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP17.35■□□□□ 0.37
DNMT1-216ENST00000588952 EFCAB10A6NFE3 127 aa17.35■□□□□ 0.37
DNMT1-216ENST00000588952 ZNF670-ZNF695F2Z2N8 137 aa17.35■□□□□ 0.37
DNMT1-216ENST00000588952 CCDC159P0C7I6 412 aa17.35■□□□□ 0.37
DNMT1-216ENST00000588952 PIPP12273 146 aaPredicted RBP17.35■□□□□ 0.37
DNMT1-216ENST00000588952 CRHBPP24387 322 aa17.35■□□□□ 0.37
DNMT1-216ENST00000588952 STOMP27105 288 aa17.35■□□□□ 0.37
DNMT1-216ENST00000588952 OPRL1P41146 370 aa17.35■□□□□ 0.37
DNMT1-216ENST00000588952 NAAAQ02083 359 aa17.35■□□□□ 0.37
DNMT1-216ENST00000588952 PLP2Q04941 152 aa17.35■□□□□ 0.37
DNMT1-216ENST00000588952 NCMAPQ5T1S8 102 aa17.35■□□□□ 0.37
DNMT1-216ENST00000588952 ZNF322Q6U7Q0 402 aaPredicted RBP17.35■□□□□ 0.37
DNMT1-216ENST00000588952 LRRN1Q6UXK5 716 aa17.35■□□□□ 0.37
DNMT1-216ENST00000588952 PLPPR2Q96GM1 343 aa17.35■□□□□ 0.37
DNMT1-216ENST00000588952 HS3ST6Q96QI5 342 aa17.35■□□□□ 0.37
DNMT1-216ENST00000588952 MNTQ99583 582 aa17.35■□□□□ 0.37
DNMT1-216ENST00000588952 ATF6BQ99941 703 aa17.35■□□□□ 0.37
DNMT1-216ENST00000588952 CNOT2Q9NZN8 540 aaKnown RBP17.35■□□□□ 0.37
DNMT1-216ENST00000588952 DOPEY2Q9Y3R5 2298 aa17.35■□□□□ 0.37
DNMT1-216ENST00000588952 ZNF878C9JN71 531 aa17.34■□□□□ 0.37
DNMT1-216ENST00000588952 FADS2O95864 444 aaKnown RBP17.34■□□□□ 0.37
DNMT1-216ENST00000588952 COX5BP10606 129 aa17.34■□□□□ 0.37
DNMT1-216ENST00000588952 ANOS1P23352 680 aa17.34■□□□□ 0.37
DNMT1-216ENST00000588952 PAX7P23759 505 aa17.34■□□□□ 0.37
DNMT1-216ENST00000588952 ST3GAL4Q11206 333 aa17.34■□□□□ 0.37
DNMT1-216ENST00000588952 ZNF684Q5T5D7 378 aa17.34■□□□□ 0.37
DNMT1-216ENST00000588952 ALDH16A1Q8IZ83 802 aa17.34■□□□□ 0.37
DNMT1-216ENST00000588952 ACBD7Q8N6N7 88 aa17.34■□□□□ 0.37
DNMT1-216ENST00000588952 ZNF540Q8NDQ6 660 aa17.34■□□□□ 0.37
DNMT1-216ENST00000588952 OR8B4Q96RC9 309 aa17.34■□□□□ 0.37
DNMT1-216ENST00000588952 COPS4Q9BT78 406 aa17.34■□□□□ 0.37
DNMT1-216ENST00000588952 JAM3Q9BX67 310 aa17.34■□□□□ 0.37
DNMT1-216ENST00000588952 MOV10Q9HCE1 1003 aaKnown RBP17.34■□□□□ 0.37
DNMT1-216ENST00000588952 PLEKHB1Q9UF11 243 aaPredicted RBP17.34■□□□□ 0.37
DNMT1-216ENST00000588952 MRM2Q9UI43 246 aaKnown RBP17.34■□□□□ 0.37
DNMT1-216ENST00000588952 FBXL3Q9UKT7 428 aa17.34■□□□□ 0.37
DNMT1-216ENST00000588952 DIMT1Q9UNQ2 313 aaKnown RBP17.34■□□□□ 0.37
DNMT1-216ENST00000588952 TMEM14AQ9Y6G1 99 aa17.34■□□□□ 0.37
DNMT1-216ENST00000588952 DAPL1A0PJW8 107 aa17.33■□□□□ 0.36
DNMT1-216ENST00000588952 C5orf49A4QMS7 147 aa17.33■□□□□ 0.36
DNMT1-216ENST00000588952 PTGES3LE9PB15 166 aa17.33■□□□□ 0.36
DNMT1-216ENST00000588952 CASKO14936 926 aa17.33■□□□□ 0.36
DNMT1-216ENST00000588952 LIMS3P0CW19 117 aa17.33■□□□□ 0.36
DNMT1-216ENST00000588952 LIMS4P0CW20 117 aa17.33■□□□□ 0.36
DNMT1-216ENST00000588952 ZNF35P13682 527 aa17.33■□□□□ 0.36
DNMT1-216ENST00000588952 C21orf33P30042 268 aaPredicted RBP17.33■□□□□ 0.36
DNMT1-216ENST00000588952 APLNRP35414 380 aa17.33■□□□□ 0.36
DNMT1-216ENST00000588952 WNT5AP41221 380 aa17.33■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms