RNA–Protein interactions for RNA: ENST00000587740.5

NCLN-203, Transcript of nicalin, humanhuman

TSL 1 (best)

Gene NCLN, Length 1,210 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCLN-203ENST00000587740 MITFO75030 526 aaPredicted RBP13.49□□□□□ -0.25
NCLN-203ENST00000587740 IGLV1-44P01699 117 aa13.49□□□□□ -0.25
NCLN-203ENST00000587740 CST2P09228 141 aa13.49□□□□□ -0.25
NCLN-203ENST00000587740 EGR1P18146 543 aa13.49□□□□□ -0.25
NCLN-203ENST00000587740 ZNF362Q5T0B9 420 aaPredicted RBP13.49□□□□□ -0.25
NCLN-203ENST00000587740 ACSM5Q6NUN0 579 aa13.49□□□□□ -0.25
NCLN-203ENST00000587740 ZBTB46Q86UZ6 589 aa13.49□□□□□ -0.25
NCLN-203ENST00000587740 OR2T4Q8NH00 348 aa13.49□□□□□ -0.25
NCLN-203ENST00000587740 FGFBP3Q8TAT2 258 aa13.49□□□□□ -0.25
NCLN-203ENST00000587740 DDOQ99489 341 aa13.49□□□□□ -0.25
NCLN-203ENST00000587740 RACGAP1Q9H0H5 632 aa13.49□□□□□ -0.25
NCLN-203ENST00000587740 NOX3Q9HBY0 568 aa13.49□□□□□ -0.25
NCLN-203ENST00000587740 SLC25A19Q9HC21 320 aa13.49□□□□□ -0.25
NCLN-203ENST00000587740 IGLV1-36A0A0B4J1U3 117 aa13.48□□□□□ -0.25
NCLN-203ENST00000587740 DCTN6O00399 190 aa13.48□□□□□ -0.25
NCLN-203ENST00000587740 VENTXO95231 258 aa13.48□□□□□ -0.25
NCLN-203ENST00000587740 PTHP01270 115 aa13.48□□□□□ -0.25
NCLN-203ENST00000587740 CRYAAP02489 173 aa13.48□□□□□ -0.25
NCLN-203ENST00000587740 CELA3BP08861 270 aa13.48□□□□□ -0.25
NCLN-203ENST00000587740 CECR9P0C854 216 aa13.48□□□□□ -0.25
NCLN-203ENST00000587740 PCBD1P61457 104 aa13.48□□□□□ -0.25
NCLN-203ENST00000587740 GLO1Q04760 184 aa13.48□□□□□ -0.25
NCLN-203ENST00000587740 CRMP1Q14194 572 aa13.48□□□□□ -0.25
NCLN-203ENST00000587740 RAB39AQ14964 217 aa13.48□□□□□ -0.25
NCLN-203ENST00000587740 PTGES3Q15185 160 aaKnown RBP13.48□□□□□ -0.25
NCLN-203ENST00000587740 TMEM236Q5W0B7 351 aa13.48□□□□□ -0.25
NCLN-203ENST00000587740 PROKR2Q8NFJ6 384 aa13.48□□□□□ -0.25
NCLN-203ENST00000587740 IL17RDQ8NFM7 739 aa13.48□□□□□ -0.25
NCLN-203ENST00000587740 PLEKHA8Q96JA3 519 aa13.48□□□□□ -0.25
NCLN-203ENST00000587740 VRK1Q99986 396 aaPredicted RBP13.48□□□□□ -0.25
NCLN-203ENST00000587740 WACQ9BTA9 647 aa13.48□□□□□ -0.25
NCLN-203ENST00000587740 C9orf16Q9BUW7 83 aa13.48□□□□□ -0.25
NCLN-203ENST00000587740 ZNF416Q9BWM5 594 aa13.48□□□□□ -0.25
NCLN-203ENST00000587740 TMEFF2Q9UIK5 374 aaPredicted RBP13.48□□□□□ -0.25
NCLN-203ENST00000587740 ORC6Q9Y5N6 252 aa13.48□□□□□ -0.25
NCLN-203ENST00000587740 IQCMA0A1B0GVH7 501 aa13.47□□□□□ -0.25
NCLN-203ENST00000587740 C12orf71A8MTZ7 269 aa13.47□□□□□ -0.25
NCLN-203ENST00000587740 SURF4O15260 269 aa13.47□□□□□ -0.25
NCLN-203ENST00000587740 LILRA1O75019 489 aa13.47□□□□□ -0.25
NCLN-203ENST00000587740 MPZL1O95297 269 aa13.47□□□□□ -0.25
NCLN-203ENST00000587740 HLA-DQA2P01906 255 aa13.47□□□□□ -0.25
NCLN-203ENST00000587740 SCG5P05408 212 aa13.47□□□□□ -0.25
NCLN-203ENST00000587740 MMP7P09237 267 aaPredicted RBP13.47□□□□□ -0.25
NCLN-203ENST00000587740 ZNF14P17017 642 aaPredicted RBP13.47□□□□□ -0.25
NCLN-203ENST00000587740 ZNF32P17041 273 aa13.47□□□□□ -0.25
NCLN-203ENST00000587740 PAICSP22234 425 aaKnown RBP13.47□□□□□ -0.25
NCLN-203ENST00000587740 LSM6P62312 80 aaKnown RBP13.47□□□□□ -0.25
NCLN-203ENST00000587740 NAAAQ02083 359 aa13.47□□□□□ -0.25
NCLN-203ENST00000587740 HSF2Q03933 536 aa13.47□□□□□ -0.25
NCLN-203ENST00000587740 PLP2Q04941 152 aa13.47□□□□□ -0.25
NCLN-203ENST00000587740 DAG1Q14118 895 aa13.47□□□□□ -0.25
NCLN-203ENST00000587740 ENDOGQ14249 297 aaKnown RBP13.47□□□□□ -0.25
NCLN-203ENST00000587740 UGT2A3Q6UWM9 527 aa13.47□□□□□ -0.25
NCLN-203ENST00000587740 SYT9Q86SS6 491 aa13.47□□□□□ -0.25
NCLN-203ENST00000587740 C11orf40Q8WZ69 217 aa13.47□□□□□ -0.25
NCLN-203ENST00000587740 OTULINQ96BN8 352 aa13.47□□□□□ -0.25
NCLN-203ENST00000587740 MS4A3Q96HJ5 214 aa13.47□□□□□ -0.25
NCLN-203ENST00000587740 ZNF75AQ96N20 296 aa13.47□□□□□ -0.25
NCLN-203ENST00000587740 PRRG3Q9BZD7 231 aa13.47□□□□□ -0.25
NCLN-203ENST00000587740 MYOZ1Q9NP98 299 aaPredicted RBP13.47□□□□□ -0.25
NCLN-203ENST00000587740 EMC7Q9NPA0 242 aa13.47□□□□□ -0.25
NCLN-203ENST00000587740 TVP23BQ9NYZ1 205 aa13.47□□□□□ -0.25
NCLN-203ENST00000587740 USE1Q9NZ43 259 aa13.47□□□□□ -0.25
NCLN-203ENST00000587740 TIMM10BQ9Y5J6 103 aa13.47□□□□□ -0.25
NCLN-203ENST00000587740 TGP01266 2768 aa13.46□□□□□ -0.25
NCLN-203ENST00000587740 PRR23D1E9PI22 279 aaPredicted RBP13.46□□□□□ -0.25
NCLN-203ENST00000587740 EI24O14681 340 aa13.46□□□□□ -0.25
NCLN-203ENST00000587740 GPANK1O95872 356 aa13.46□□□□□ -0.25
NCLN-203ENST00000587740 SERPINA5P05154 406 aa13.46□□□□□ -0.25
NCLN-203ENST00000587740 ALPLP05186 524 aa13.46□□□□□ -0.25
NCLN-203ENST00000587740 TACSTD2P09758 323 aa13.46□□□□□ -0.25
NCLN-203ENST00000587740 PRR23D2P0DMB1 279 aaPredicted RBP13.46□□□□□ -0.25
NCLN-203ENST00000587740 ANPEPP15144 967 aa13.46□□□□□ -0.25
NCLN-203ENST00000587740 PYCR1P32322 319 aa13.46□□□□□ -0.25
NCLN-203ENST00000587740 SERPINF1P36955 418 aa13.46□□□□□ -0.25
NCLN-203ENST00000587740 SRP14P37108 136 aaKnown RBP13.46□□□□□ -0.25
NCLN-203ENST00000587740 ALDH3A2P51648 485 aa13.46□□□□□ -0.25
NCLN-203ENST00000587740 SLC25A1P53007 311 aa13.46□□□□□ -0.25
NCLN-203ENST00000587740 RAD23AP54725 363 aa13.46□□□□□ -0.25
NCLN-203ENST00000587740 SNRPD2P62316 118 aaKnown RBP13.46□□□□□ -0.25
NCLN-203ENST00000587740 TEKQ02763 1124 aa13.46□□□□□ -0.25
NCLN-203ENST00000587740 RCN1Q15293 331 aa13.46□□□□□ -0.25
NCLN-203ENST00000587740 SNAPC1Q16533 368 aa13.46□□□□□ -0.25
NCLN-203ENST00000587740 KCNMB1Q16558 191 aa13.46□□□□□ -0.25
NCLN-203ENST00000587740 PABPC1L2AQ5JQF8 200 aa13.46□□□□□ -0.25
NCLN-203ENST00000587740 ZBTB49Q6ZSB9 765 aa13.46□□□□□ -0.25
NCLN-203ENST00000587740 ZSCAN2Q7Z7L9 614 aaPredicted RBP13.46□□□□□ -0.25
NCLN-203ENST00000587740 MYPOPQ86VE0 399 aaPredicted RBP13.46□□□□□ -0.25
NCLN-203ENST00000587740 ALDH16A1Q8IZ83 802 aa13.46□□□□□ -0.25
NCLN-203ENST00000587740 CBR4Q8N4T8 237 aa13.46□□□□□ -0.25
NCLN-203ENST00000587740 SEMA6DQ8NFY4 1073 aa13.46□□□□□ -0.25
NCLN-203ENST00000587740 OR9Q1Q8NGQ5 310 aa13.46□□□□□ -0.25
NCLN-203ENST00000587740 EME1Q96AY2 570 aa13.46□□□□□ -0.25
NCLN-203ENST00000587740 C1orf198Q9H425 327 aa13.46□□□□□ -0.25
NCLN-203ENST00000587740 RIBC2Q9H4K1 309 aa13.46□□□□□ -0.25
NCLN-203ENST00000587740 POLR1DQ9Y2S0 133 aa13.46□□□□□ -0.25
NCLN-203ENST00000587740 IGHV2OR16-5A0A0B4J2B6 119 aa13.45□□□□□ -0.26
NCLN-203ENST00000587740 FAM183AA6NL82 134 aa13.45□□□□□ -0.26
NCLN-203ENST00000587740 ZAR1LA6NP61 321 aa13.45□□□□□ -0.26
NCLN-203ENST00000587740 GYPBP06028 91 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms