RNA–Protein interactions for RNA: ENST00000586833.5

TPM4-205, Transcript of tropomyosin 4, humanhuman

TSL 5

Gene TPM4, Length 558 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-205ENST00000586833 ATF6BQ99941 703 aa12.16□□□□□ -0.46
TPM4-205ENST00000586833 VRK1Q99986 396 aaPredicted RBP12.16□□□□□ -0.46
TPM4-205ENST00000586833 RIBC2Q9H4K1 309 aa12.16□□□□□ -0.46
TPM4-205ENST00000586833 SP140LQ9H930 580 aa12.16□□□□□ -0.46
TPM4-205ENST00000586833 MYOZ1Q9NP98 299 aaPredicted RBP12.16□□□□□ -0.46
TPM4-205ENST00000586833 CGGBP1Q9UFW8 167 aaPredicted RBP12.16□□□□□ -0.46
TPM4-205ENST00000586833 CYB5R1Q9UHQ9 305 aa12.16□□□□□ -0.46
TPM4-205ENST00000586833 GDF2Q9UK05 429 aaPredicted RBP12.16□□□□□ -0.46
TPM4-205ENST00000586833 FREM1Q5H8C1 2179 aa12.16□□□□□ -0.46
TPM4-205ENST00000586833 APCP25054 2843 aa12.15□□□□□ -0.46
TPM4-205ENST00000586833 TVP23AA6NH52 213 aa12.15□□□□□ -0.46
TPM4-205ENST00000586833 FAM183AA6NL82 134 aa12.15□□□□□ -0.46
TPM4-205ENST00000586833 H3BNX3 289 aa12.15□□□□□ -0.46
TPM4-205ENST00000586833 RER1O15258 196 aa12.15□□□□□ -0.46
TPM4-205ENST00000586833 GPRIN2O60269 458 aa12.15□□□□□ -0.46
TPM4-205ENST00000586833 ICMTO60725 284 aa12.15□□□□□ -0.46
TPM4-205ENST00000586833 APOC1P02654 83 aa12.15□□□□□ -0.46
TPM4-205ENST00000586833 GYPBP06028 91 aa12.15□□□□□ -0.46
TPM4-205ENST00000586833 LIPAP38571 399 aa12.15□□□□□ -0.46
TPM4-205ENST00000586833 SLC15A1P46059 708 aa12.15□□□□□ -0.46
TPM4-205ENST00000586833 ALDH3A2P51648 485 aa12.15□□□□□ -0.46
TPM4-205ENST00000586833 EFNA4P52798 201 aa12.15□□□□□ -0.46
TPM4-205ENST00000586833 TPTEP56180 551 aa12.15□□□□□ -0.46
TPM4-205ENST00000586833 CDC42P60953 191 aa12.15□□□□□ -0.46
TPM4-205ENST00000586833 PPP1CBP62140 327 aa12.15□□□□□ -0.46
TPM4-205ENST00000586833 HIST1H3AP68431 136 aa12.15□□□□□ -0.46
TPM4-205ENST00000586833 PPP2R2BQ00005 443 aa12.15□□□□□ -0.46
TPM4-205ENST00000586833 CCDC92Q53HC0 331 aaPredicted RBP12.15□□□□□ -0.46
TPM4-205ENST00000586833 TEX30Q5JUR7 227 aa12.15□□□□□ -0.46
TPM4-205ENST00000586833 HIST2H3PS2Q5TEC6 136 aa12.15□□□□□ -0.46
TPM4-205ENST00000586833 SLC18B1Q6NT16 456 aa12.15□□□□□ -0.46
TPM4-205ENST00000586833 CLEC2AQ6UVW9 174 aa12.15□□□□□ -0.46
TPM4-205ENST00000586833 HIST2H3AQ71DI3 136 aa12.15□□□□□ -0.46
TPM4-205ENST00000586833 TGIF2LYQ8IUE0 185 aa12.15□□□□□ -0.46
TPM4-205ENST00000586833 LINC00346Q8IVM7 164 aa12.15□□□□□ -0.46
TPM4-205ENST00000586833 OR51L1Q8NGJ5 315 aa12.15□□□□□ -0.46
TPM4-205ENST00000586833 EME1Q96AY2 570 aa12.15□□□□□ -0.46
TPM4-205ENST00000586833 CIB1Q99828 191 aa12.15□□□□□ -0.46
TPM4-205ENST00000586833 OR51B6Q9H340 312 aa12.15□□□□□ -0.46
TPM4-205ENST00000586833 C8orf4Q9NR00 106 aa12.15□□□□□ -0.46
TPM4-205ENST00000586833 CYSLTR2Q9NS75 346 aa12.15□□□□□ -0.46
TPM4-205ENST00000586833 USE1Q9NZ43 259 aa12.15□□□□□ -0.46
TPM4-205ENST00000586833 GRIP1Q9Y3R0 1128 aa12.15□□□□□ -0.46
TPM4-205ENST00000586833 LHFPL6Q9Y693 200 aa12.15□□□□□ -0.46
TPM4-205ENST00000586833 COMMD3-BMI1R4GMX3 469 aa12.15□□□□□ -0.46
TPM4-205ENST00000586833 CACNA1DQ01668 2161 aa12.14□□□□□ -0.47
TPM4-205ENST00000586833 LOC100509620A0A075B734 347 aa12.14□□□□□ -0.47
TPM4-205ENST00000586833 PLSCR5A0PG75 271 aa12.14□□□□□ -0.47
TPM4-205ENST00000586833 ZAR1LA6NP61 321 aa12.14□□□□□ -0.47
TPM4-205ENST00000586833 ZNF593O00488 134 aaPredicted RBP12.14□□□□□ -0.47
TPM4-205ENST00000586833 MITFO75030 526 aaPredicted RBP12.14□□□□□ -0.47
TPM4-205ENST00000586833 GPANK1O95872 356 aa12.14□□□□□ -0.47
TPM4-205ENST00000586833 GGT2P36268 569 aa12.14□□□□□ -0.47
TPM4-205ENST00000586833 MALLQ13021 153 aa12.14□□□□□ -0.47
TPM4-205ENST00000586833 SLX4IPQ5VYV7 408 aa12.14□□□□□ -0.47
TPM4-205ENST00000586833 TMEM236Q5W0B7 351 aa12.14□□□□□ -0.47
TPM4-205ENST00000586833 TMEM154Q6P9G4 183 aa12.14□□□□□ -0.47
TPM4-205ENST00000586833 CORO6Q6QEF8 472 aa12.14□□□□□ -0.47
TPM4-205ENST00000586833 ZBTB49Q6ZSB9 765 aa12.14□□□□□ -0.47
TPM4-205ENST00000586833 ERI1Q8IV48 349 aaKnown RBP12.14□□□□□ -0.47
TPM4-205ENST00000586833 CPOQ8IVL8 374 aa12.14□□□□□ -0.47
TPM4-205ENST00000586833 GID4Q8IVV7 300 aa12.14□□□□□ -0.47
TPM4-205ENST00000586833 PAQR4Q8N4S7 273 aaPredicted RBP12.14□□□□□ -0.47
TPM4-205ENST00000586833 ZNF454Q8N9F8 522 aa12.14□□□□□ -0.47
TPM4-205ENST00000586833 OR6N2Q8NGY6 317 aa12.14□□□□□ -0.47
TPM4-205ENST00000586833 APOBEC3DQ96AK3 386 aaPredicted RBP12.14□□□□□ -0.47
TPM4-205ENST00000586833 DOK1Q99704 481 aa12.14□□□□□ -0.47
TPM4-205ENST00000586833 SYT3Q9BQG1 590 aa12.14□□□□□ -0.47
TPM4-205ENST00000586833 RHNO1Q9BSD3 238 aa12.14□□□□□ -0.47
TPM4-205ENST00000586833 COPS4Q9BT78 406 aa12.14□□□□□ -0.47
TPM4-205ENST00000586833 GABARAPL3Q9BY60 117 aa12.14□□□□□ -0.47
TPM4-205ENST00000586833 MRPL37Q9BZE1 423 aaKnown RBP12.14□□□□□ -0.47
TPM4-205ENST00000586833 TOR3AQ9H497 397 aa12.14□□□□□ -0.47
TPM4-205ENST00000586833 MRPL22Q9NWU5 206 aaKnown RBP12.14□□□□□ -0.47
TPM4-205ENST00000586833 IMPAD1Q9NX62 359 aa12.14□□□□□ -0.47
TPM4-205ENST00000586833 SLC22A31A6NKX4 558 aa12.13□□□□□ -0.47
TPM4-205ENST00000586833 ZNF878C9JN71 531 aa12.13□□□□□ -0.47
TPM4-205ENST00000586833 EI24O14681 340 aa12.13□□□□□ -0.47
TPM4-205ENST00000586833 TLX2O43763 284 aaPredicted RBP12.13□□□□□ -0.47
TPM4-205ENST00000586833 F12P00748 615 aaPredicted RBP12.13□□□□□ -0.47
TPM4-205ENST00000586833 ZNF250P15622 560 aa12.13□□□□□ -0.47
TPM4-205ENST00000586833 GRB2P62993 217 aaKnown RBP12.13□□□□□ -0.47
TPM4-205ENST00000586833 CLEC12BQ2HXU8 276 aa12.13□□□□□ -0.47
TPM4-205ENST00000586833 MST1LQ2TV78 715 aa12.13□□□□□ -0.47
TPM4-205ENST00000586833 PCGF3Q3KNV8 242 aa12.13□□□□□ -0.47
TPM4-205ENST00000586833 FAM209AQ5JX71 171 aa12.13□□□□□ -0.47
TPM4-205ENST00000586833 MBNL2Q5VZF2 373 aaKnown RBP12.13□□□□□ -0.47
TPM4-205ENST00000586833 DCXRQ7Z4W1 244 aa12.13□□□□□ -0.47
TPM4-205ENST00000586833 ZNF511Q8NB15 262 aa12.13□□□□□ -0.47
TPM4-205ENST00000586833 TMEM163Q8TC26 289 aa12.13□□□□□ -0.47
TPM4-205ENST00000586833 PTP4A1Q93096 173 aa12.13□□□□□ -0.47
TPM4-205ENST00000586833 MED20Q9H944 212 aa12.13□□□□□ -0.47
TPM4-205ENST00000586833 TAAR3PQ9P1P4 343 aa12.13□□□□□ -0.47
TPM4-205ENST00000586833 TMEM14AQ9Y6G1 99 aa12.13□□□□□ -0.47
TPM4-205ENST00000586833 ITPR2Q14571 2701 aa12.13□□□□□ -0.47
TPM4-205ENST00000586833 SNTNA6NMZ2 147 aa12.12□□□□□ -0.47
TPM4-205ENST00000586833 F5H5K5 113 aa12.12□□□□□ -0.47
TPM4-205ENST00000586833 SSX4O60224 188 aa12.12□□□□□ -0.47
TPM4-205ENST00000586833 IGHV3-13P01766 116 aa12.12□□□□□ -0.47
TPM4-205ENST00000586833 IGHV4-39P01824 125 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms