RNA–Protein interactions for RNA: ENST00000586058.1

LIG3-206, Transcript of DNA ligase 3, humanhuman

TSL 2

Gene LIG3, Length 581 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-206ENST00000586058 GVINP1Q7Z2Y8 2422 aa5.46□□□□□ -1.53
LIG3-206ENST00000586058 ZFHX2Q9C0A1 2572 aaPredicted RBP5.46□□□□□ -1.54
LIG3-206ENST00000586058 RIF1Q5UIP0 2472 aaKnown RBP5.46□□□□□ -1.54
LIG3-206ENST00000586058 hCG_2014768A0A024R1R8 64 aa5.46□□□□□ -1.54
LIG3-206ENST00000586058 IQCMA0A1B0GVH7 501 aa5.46□□□□□ -1.54
LIG3-206ENST00000586058 CIB4A0PJX0 185 aa5.46□□□□□ -1.54
LIG3-206ENST00000586058 OR6C6A6NF89 314 aa5.46□□□□□ -1.54
LIG3-206ENST00000586058 ANXA2P2A6NMY6 339 aa5.46□□□□□ -1.54
LIG3-206ENST00000586058 OGG1O15527 345 aa5.46□□□□□ -1.54
LIG3-206ENST00000586058 TBX1O43435 398 aa5.46□□□□□ -1.54
LIG3-206ENST00000586058 SGCEO43556 437 aa5.46□□□□□ -1.54
LIG3-206ENST00000586058 UPK3AO75631 287 aa5.46□□□□□ -1.54
LIG3-206ENST00000586058 CLPXO76031 633 aa5.46□□□□□ -1.54
LIG3-206ENST00000586058 CDRT1O95170 752 aa5.46□□□□□ -1.54
LIG3-206ENST00000586058 CNOT4O95628 575 aaKnown RBP5.46□□□□□ -1.54
LIG3-206ENST00000586058 LALBAP00709 142 aa5.46□□□□□ -1.54
LIG3-206ENST00000586058 CRHP06850 196 aa5.46□□□□□ -1.54
LIG3-206ENST00000586058 VSIG8P0DPA2 414 aa5.46□□□□□ -1.54
LIG3-206ENST00000586058 ZNF20P17024 532 aa5.46□□□□□ -1.54
LIG3-206ENST00000586058 ZNF182P17025 639 aaPredicted RBP5.46□□□□□ -1.54
LIG3-206ENST00000586058 KLK2P20151 261 aa5.46□□□□□ -1.54
LIG3-206ENST00000586058 ACHEP22303 614 aa5.46□□□□□ -1.54
LIG3-206ENST00000586058 CDAP32320 146 aa5.46□□□□□ -1.54
LIG3-206ENST00000586058 ARR3P36575 388 aa5.46□□□□□ -1.54
LIG3-206ENST00000586058 CD79BP40259 229 aa5.46□□□□□ -1.54
LIG3-206ENST00000586058 OR3A2P47893 321 aa5.46□□□□□ -1.54
LIG3-206ENST00000586058 HTR5AP47898 357 aa5.46□□□□□ -1.54
LIG3-206ENST00000586058 CX3CR1P49238 355 aa5.46□□□□□ -1.54
LIG3-206ENST00000586058 MTNR1BP49286 362 aa5.46□□□□□ -1.54
LIG3-206ENST00000586058 PSMD7P51665 324 aa5.46□□□□□ -1.54
LIG3-206ENST00000586058 TPTEP56180 551 aa5.46□□□□□ -1.54
LIG3-206ENST00000586058 UBE2NP61088 152 aaKnown RBP5.46□□□□□ -1.54
LIG3-206ENST00000586058 PPP3R1P63098 170 aa5.46□□□□□ -1.54
LIG3-206ENST00000586058 FABP5Q01469 135 aa5.46□□□□□ -1.54
LIG3-206ENST00000586058 MXD1Q05195 221 aa5.46□□□□□ -1.54
LIG3-206ENST00000586058 FAPQ12884 760 aa5.46□□□□□ -1.54
LIG3-206ENST00000586058 MRPL49Q13405 166 aaKnown RBP5.46□□□□□ -1.54
LIG3-206ENST00000586058 DYNC1I2Q13409 638 aaKnown RBP5.46□□□□□ -1.54
LIG3-206ENST00000586058 SPCS2Q15005 226 aa5.46□□□□□ -1.54
LIG3-206ENST00000586058 PCK2Q16822 640 aa5.46□□□□□ -1.54
LIG3-206ENST00000586058 ACSF3Q4G176 576 aaPredicted RBP5.46□□□□□ -1.54
LIG3-206ENST00000586058 ACSM3Q53FZ2 586 aa5.46□□□□□ -1.54
LIG3-206ENST00000586058 RNFT1Q5M7Z0 435 aa5.46□□□□□ -1.54
LIG3-206ENST00000586058 SPANXN2Q5MJ10 180 aa5.46□□□□□ -1.54
LIG3-206ENST00000586058 ELFN2Q5R3F8 820 aa5.46□□□□□ -1.54
LIG3-206ENST00000586058 DDI2Q5TDH0 399 aa5.46□□□□□ -1.54
LIG3-206ENST00000586058 FAM27BQ5VT28 67 aa5.46□□□□□ -1.54
LIG3-206ENST00000586058 NSUN5P2Q63ZY6 315 aa5.46□□□□□ -1.54
LIG3-206ENST00000586058 DMKNQ6E0U4 476 aaPredicted RBP5.46□□□□□ -1.54
LIG3-206ENST00000586058 CORO6Q6QEF8 472 aa5.46□□□□□ -1.54
LIG3-206ENST00000586058 GFRALQ6UXV0 394 aa5.46□□□□□ -1.54
LIG3-206ENST00000586058 UNQ6126/PRO20091Q6UXV3 157 aa5.46□□□□□ -1.54
LIG3-206ENST00000586058 RPTNQ6XPR3 784 aa5.46□□□□□ -1.54
LIG3-206ENST00000586058 LINC00299Q6ZSB3 139 aa5.46□□□□□ -1.54
LIG3-206ENST00000586058 FOXL2NBQ6ZUU3 175 aa5.46□□□□□ -1.54
LIG3-206ENST00000586058 FAM214BQ7L5A3 538 aa5.46□□□□□ -1.54
LIG3-206ENST00000586058 ZC3HAV1Q7Z2W4 902 aaKnown RBP5.46□□□□□ -1.54
LIG3-206ENST00000586058 CEACAM19Q7Z692 300 aa5.46□□□□□ -1.54
LIG3-206ENST00000586058 CD163Q86VB7 1156 aa5.46□□□□□ -1.54
LIG3-206ENST00000586058 SLC22A24Q8N4F4 322 aa5.46□□□□□ -1.54
LIG3-206ENST00000586058 CCDC54Q8NEL0 328 aa5.46□□□□□ -1.54
LIG3-206ENST00000586058 OR5M9Q8NGP3 310 aa5.46□□□□□ -1.54
LIG3-206ENST00000586058 OR13C3Q8NGS6 347 aa5.46□□□□□ -1.54
LIG3-206ENST00000586058 FAM57AQ8TBR7 257 aa5.46□□□□□ -1.54
LIG3-206ENST00000586058 SNRNP27Q8WVK2 155 aaKnown RBP5.46□□□□□ -1.54
LIG3-206ENST00000586058 RNF133Q8WVZ7 376 aa5.46□□□□□ -1.54
LIG3-206ENST00000586058 GHSRQ92847 366 aa5.46□□□□□ -1.54
LIG3-206ENST00000586058 CPNE2Q96FN4 548 aaPredicted RBP5.46□□□□□ -1.54
LIG3-206ENST00000586058 PGAM5Q96HS1 289 aa5.46□□□□□ -1.54
LIG3-206ENST00000586058 C4orf45Q96LM5 186 aa5.46□□□□□ -1.54
LIG3-206ENST00000586058 KCNJ15Q99712 375 aa5.46□□□□□ -1.54
LIG3-206ENST00000586058 CENPOQ9BU64 300 aa5.46□□□□□ -1.54
LIG3-206ENST00000586058 MED18Q9BUE0 208 aa5.46□□□□□ -1.54
LIG3-206ENST00000586058 MRI1Q9BV20 369 aa5.46□□□□□ -1.54
LIG3-206ENST00000586058 ZNF416Q9BWM5 594 aa5.46□□□□□ -1.54
LIG3-206ENST00000586058 MMP27Q9H306 513 aa5.46□□□□□ -1.54
LIG3-206ENST00000586058 CXorf56Q9H5V9 222 aa5.46□□□□□ -1.54
LIG3-206ENST00000586058 MOV10Q9HCE1 1003 aaKnown RBP5.46□□□□□ -1.54
LIG3-206ENST00000586058 ZNF71Q9NQZ8 489 aaPredicted RBP5.46□□□□□ -1.54
LIG3-206ENST00000586058 SNTG1Q9NSN8 517 aa5.46□□□□□ -1.54
LIG3-206ENST00000586058 SLCO1C1Q9NYB5 712 aa5.46□□□□□ -1.54
LIG3-206ENST00000586058 LUZP4Q9P127 313 aa5.46□□□□□ -1.54
LIG3-206ENST00000586058 CLCF1Q9UBD9 225 aa5.46□□□□□ -1.54
LIG3-206ENST00000586058 MALT1Q9UDY8 824 aa5.46□□□□□ -1.54
LIG3-206ENST00000586058 CYB5R1Q9UHQ9 305 aa5.46□□□□□ -1.54
LIG3-206ENST00000586058 MRM2Q9UI43 246 aaKnown RBP5.46□□□□□ -1.54
LIG3-206ENST00000586058 ATPIF1Q9UII2 106 aa5.46□□□□□ -1.54
LIG3-206ENST00000586058 ST6GALNAC2Q9UJ37 374 aa5.46□□□□□ -1.54
LIG3-206ENST00000586058 ZNF391Q9UJN7 358 aa5.46□□□□□ -1.54
LIG3-206ENST00000586058 ING1Q9UK53 422 aaPredicted RBP5.46□□□□□ -1.54
LIG3-206ENST00000586058 ZMIZ1Q9ULJ6 1067 aa5.46□□□□□ -1.54
LIG3-206ENST00000586058 HHLA2Q9UM44 414 aa5.46□□□□□ -1.54
LIG3-206ENST00000586058 CLEC4AQ9UMR7 237 aa5.46□□□□□ -1.54
LIG3-206ENST00000586058 PROCRQ9UNN8 238 aa5.46□□□□□ -1.54
LIG3-206ENST00000586058 TMA7Q9Y2S6 64 aaKnown RBP5.46□□□□□ -1.54
LIG3-206ENST00000586058 KLHDC2Q9Y2U9 406 aa5.46□□□□□ -1.54
LIG3-206ENST00000586058 GRIP1Q9Y3R0 1128 aa5.46□□□□□ -1.54
LIG3-206ENST00000586058 TIMM10BQ9Y5J6 103 aa5.46□□□□□ -1.54
LIG3-206ENST00000586058 PEX16Q9Y5Y5 336 aa5.46□□□□□ -1.54
LIG3-206ENST00000586058 LHFPL6Q9Y693 200 aa5.46□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms