RNA–Protein interactions for RNA: ENST00000583294.1

SMARCE1-219, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 2

Gene SMARCE1, Length 476 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-219ENST00000583294 ARG1P05089 322 aa3.24□□□□□ -1.89
SMARCE1-219ENST00000583294 SERPINE2P07093 398 aa3.24□□□□□ -1.89
SMARCE1-219ENST00000583294 CD3GP09693 182 aa3.24□□□□□ -1.89
SMARCE1-219ENST00000583294 CISD3P0C7P0 127 aa3.24□□□□□ -1.89
SMARCE1-219ENST00000583294 OR56A5P0C7T3 313 aa3.24□□□□□ -1.89
SMARCE1-219ENST00000583294 TCN2P20062 427 aa3.24□□□□□ -1.89
SMARCE1-219ENST00000583294 BCKDHBP21953 392 aa3.24□□□□□ -1.89
SMARCE1-219ENST00000583294 OTX1P32242 354 aaPredicted RBP3.24□□□□□ -1.89
SMARCE1-219ENST00000583294 PRRX1P54821 245 aa3.24□□□□□ -1.89
SMARCE1-219ENST00000583294 LOXL1Q08397 574 aaPredicted RBP3.24□□□□□ -1.89
SMARCE1-219ENST00000583294 IRF4Q15306 451 aa3.24□□□□□ -1.89
SMARCE1-219ENST00000583294 PSMD5Q16401 504 aa3.24□□□□□ -1.89
SMARCE1-219ENST00000583294 SPANXN2Q5MJ10 180 aa3.24□□□□□ -1.89
SMARCE1-219ENST00000583294 METAP1DQ6UB28 335 aaPredicted RBP3.24□□□□□ -1.89
SMARCE1-219ENST00000583294 TMEM205Q6UW68 189 aa3.24□□□□□ -1.89
SMARCE1-219ENST00000583294 WDR86Q86TI4 376 aa3.24□□□□□ -1.89
SMARCE1-219ENST00000583294 LGI3Q8N145 548 aa3.24□□□□□ -1.89
SMARCE1-219ENST00000583294 CCDC148Q8NFR7 591 aa3.24□□□□□ -1.89
SMARCE1-219ENST00000583294 OR4C5Q8NGB2 326 aa3.24□□□□□ -1.89
SMARCE1-219ENST00000583294 COQ8AQ8NI60 647 aa3.24□□□□□ -1.89
SMARCE1-219ENST00000583294 PIFOQ8TCI5 191 aa3.24□□□□□ -1.89
SMARCE1-219ENST00000583294 TMEM230Q96A57 120 aa3.24□□□□□ -1.89
SMARCE1-219ENST00000583294 MCUR1Q96AQ8 359 aa3.24□□□□□ -1.89
SMARCE1-219ENST00000583294 SEH1LQ96EE3 360 aa3.24□□□□□ -1.89
SMARCE1-219ENST00000583294 PRRC1Q96M27 445 aa3.24□□□□□ -1.89
SMARCE1-219ENST00000583294 TGS1Q96RS0 853 aaKnown RBP3.24□□□□□ -1.89
SMARCE1-219ENST00000583294 TIMM17AQ99595 171 aa3.24□□□□□ -1.89
SMARCE1-219ENST00000583294 NTN4Q9HB63 628 aa3.24□□□□□ -1.89
SMARCE1-219ENST00000583294 SIRT7Q9NRC8 400 aa3.24□□□□□ -1.89
SMARCE1-219ENST00000583294 RAB20Q9NX57 234 aa3.24□□□□□ -1.89
SMARCE1-219ENST00000583294 TMEM14AQ9Y6G1 99 aa3.24□□□□□ -1.89
SMARCE1-219ENST00000583294 TRBV9A0A0B4J1U6 114 aa3.23□□□□□ -1.89
SMARCE1-219ENST00000583294 TMEM223A0PJW6 202 aa3.23□□□□□ -1.89
SMARCE1-219ENST00000583294 DNALI1O14645 258 aaPredicted RBP3.23□□□□□ -1.89
SMARCE1-219ENST00000583294 HUS1O60921 280 aa3.23□□□□□ -1.89
SMARCE1-219ENST00000583294 MUC1P15941 1255 aaPredicted RBP3.23□□□□□ -1.89
SMARCE1-219ENST00000583294 DTYMKP23919 212 aa3.23□□□□□ -1.89
SMARCE1-219ENST00000583294 SSTR5P35346 364 aa3.23□□□□□ -1.89
SMARCE1-219ENST00000583294 UQCRFS1P47985 274 aa3.23□□□□□ -1.89
SMARCE1-219ENST00000583294 HCAR3P49019 387 aa3.23□□□□□ -1.89
SMARCE1-219ENST00000583294 TRAM2Q15035 370 aa3.23□□□□□ -1.89
SMARCE1-219ENST00000583294 Q5W150 140 aa3.23□□□□□ -1.89
SMARCE1-219ENST00000583294 LUZP2Q86TE4 346 aa3.23□□□□□ -1.89
SMARCE1-219ENST00000583294 CALHM1Q8IU99 346 aa3.23□□□□□ -1.89
SMARCE1-219ENST00000583294 OR8U1Q8NH10 309 aa3.23□□□□□ -1.89
SMARCE1-219ENST00000583294 C15orf40Q8WUR7 153 aa3.23□□□□□ -1.89
SMARCE1-219ENST00000583294 GALNT14Q96FL9 552 aa3.23□□□□□ -1.89
SMARCE1-219ENST00000583294 COL21A1Q96P44 957 aa3.23□□□□□ -1.89
SMARCE1-219ENST00000583294 DCAF16Q9NXF7 216 aa3.23□□□□□ -1.89
SMARCE1-219ENST00000583294 OR6C74A6NCV1 312 aa3.22□□□□□ -1.89
SMARCE1-219ENST00000583294 TEX46H3BTG2 121 aa3.22□□□□□ -1.89
SMARCE1-219ENST00000583294 SCAMP2O15127 329 aaKnown RBP3.22□□□□□ -1.89
SMARCE1-219ENST00000583294 BET1O15155 118 aa3.22□□□□□ -1.89
SMARCE1-219ENST00000583294 GCM2O75603 506 aaPredicted RBP3.22□□□□□ -1.89
SMARCE1-219ENST00000583294 FLOT1O75955 427 aa3.22□□□□□ -1.89
SMARCE1-219ENST00000583294 OR2F2O95006 317 aa3.22□□□□□ -1.89
SMARCE1-219ENST00000583294 ZNF286BP0CG31 522 aa3.22□□□□□ -1.89
SMARCE1-219ENST00000583294 U2AF2P26368 475 aaKnown RBP eCLIP3.22□□□□□ -1.89
SMARCE1-219ENST00000583294 OR1E1P30953 314 aa3.22□□□□□ -1.89
SMARCE1-219ENST00000583294 P2RX1P51575 399 aa3.22□□□□□ -1.89
SMARCE1-219ENST00000583294 CDKN2DP55273 166 aa3.22□□□□□ -1.89
SMARCE1-219ENST00000583294 PPP1CBP62140 327 aa3.22□□□□□ -1.89
SMARCE1-219ENST00000583294 MERTKQ12866 999 aa3.22□□□□□ -1.89
SMARCE1-219ENST00000583294 QPRTQ15274 297 aa3.22□□□□□ -1.89
SMARCE1-219ENST00000583294 UBE2UQ5VVX9 321 aa3.22□□□□□ -1.89
SMARCE1-219ENST00000583294 SAXO2Q658L1 398 aa3.22□□□□□ -1.89
SMARCE1-219ENST00000583294 TTC23LQ6PF05 361 aa3.22□□□□□ -1.89
SMARCE1-219ENST00000583294 EIF3MQ7L2H7 374 aaKnown RBP3.22□□□□□ -1.89
SMARCE1-219ENST00000583294 MRPL55Q7Z7F7 128 aaKnown RBP3.22□□□□□ -1.89
SMARCE1-219ENST00000583294 UBALD2Q8IYN6 164 aa3.22□□□□□ -1.89
SMARCE1-219ENST00000583294 ZNF561Q8N587 486 aa3.22□□□□□ -1.89
SMARCE1-219ENST00000583294 ZNF709Q8N972 641 aa3.22□□□□□ -1.89
SMARCE1-219ENST00000583294 APH1BQ8WW43 257 aa3.22□□□□□ -1.89
SMARCE1-219ENST00000583294 SPIN2AQ99865 258 aa3.22□□□□□ -1.89
SMARCE1-219ENST00000583294 SPIN2BQ9BPZ2 258 aa3.22□□□□□ -1.89
SMARCE1-219ENST00000583294 GEMIN7Q9H840 131 aaKnown RBP3.22□□□□□ -1.89
SMARCE1-219ENST00000583294 TMEM165Q9HC07 324 aa3.22□□□□□ -1.89
SMARCE1-219ENST00000583294 AGPAT4Q9NRZ5 378 aa3.22□□□□□ -1.89
SMARCE1-219ENST00000583294 MTCH1Q9NZJ7 389 aa3.22□□□□□ -1.89
SMARCE1-219ENST00000583294 DOCK8Q8NF50 2099 aa3.22□□□□□ -1.89
SMARCE1-219ENST00000583294 NSD2O96028 1365 aa3.22□□□□□ -1.89
SMARCE1-219ENST00000583294 KIF26AQ9ULI4 1882 aaPredicted RBP3.22□□□□□ -1.89
SMARCE1-219ENST00000583294 ADAMTS13Q76LX8 1427 aa3.21□□□□□ -1.9
SMARCE1-219ENST00000583294 RAB3AP20336 220 aa3.21□□□□□ -1.9
SMARCE1-219ENST00000583294 KIR3DL2P43630 455 aa3.21□□□□□ -1.9
SMARCE1-219ENST00000583294 CCNA1P78396 465 aa3.21□□□□□ -1.9
SMARCE1-219ENST00000583294 ZNF266Q14584 549 aa3.21□□□□□ -1.9
SMARCE1-219ENST00000583294 CHST4Q8NCG5 386 aa3.21□□□□□ -1.9
SMARCE1-219ENST00000583294 OR52E2Q8NGJ4 325 aa3.21□□□□□ -1.9
SMARCE1-219ENST00000583294 OR5K2Q8NHB8 316 aa3.21□□□□□ -1.9
SMARCE1-219ENST00000583294 ZNF461Q8TAF7 563 aa3.21□□□□□ -1.9
SMARCE1-219ENST00000583294 NRGNQ92686 78 aa3.21□□□□□ -1.9
SMARCE1-219ENST00000583294 FLYWCH2Q96CP2 140 aaKnown RBP3.21□□□□□ -1.9
SMARCE1-219ENST00000583294 RSPO3Q9BXY4 272 aaPredicted RBP3.21□□□□□ -1.9
SMARCE1-219ENST00000583294 LCE3DQ9BYE3 92 aa3.21□□□□□ -1.9
SMARCE1-219ENST00000583294 ACTR3CQ9C0K3 210 aaPredicted RBP3.21□□□□□ -1.9
SMARCE1-219ENST00000583294 DDX19AQ9NUU7 478 aaKnown RBP3.21□□□□□ -1.9
SMARCE1-219ENST00000583294 LYARQ9NX58 379 aaKnown RBP3.21□□□□□ -1.9
SMARCE1-219ENST00000583294 TSSC4Q9Y5U2 329 aaPredicted RBP3.21□□□□□ -1.9
SMARCE1-219ENST00000583294 GAKO14976 1311 aa3.2□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 78.1 ms