RNA–Protein interactions for RNA: ENST00000582308.1

RFFL-210, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 3

Gene RFFL, Length 398 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-210ENST00000582308 PABPC1L2AQ5JQF8 200 aa8.3□□□□□ -1.08
RFFL-210ENST00000582308 ZNF684Q5T5D7 378 aa8.3□□□□□ -1.08
RFFL-210ENST00000582308 TMEM53Q6P2H8 277 aa8.3□□□□□ -1.08
RFFL-210ENST00000582308 SEZ6L2Q6UXD5 910 aa8.3□□□□□ -1.08
RFFL-210ENST00000582308 SPATC1Q76KD6 591 aa8.3□□□□□ -1.08
RFFL-210ENST00000582308 VASH1Q7L8A9 365 aaPredicted RBP8.3□□□□□ -1.08
RFFL-210ENST00000582308 MYPOPQ86VE0 399 aaPredicted RBP8.3□□□□□ -1.08
RFFL-210ENST00000582308 ZNF584Q8IVC4 421 aa8.3□□□□□ -1.08
RFFL-210ENST00000582308 STX19Q8N4C7 294 aa8.3□□□□□ -1.08
RFFL-210ENST00000582308 SSC4DQ8WTU2 575 aa8.3□□□□□ -1.08
RFFL-210ENST00000582308 RNF133Q8WVZ7 376 aa8.3□□□□□ -1.08
RFFL-210ENST00000582308 IPCEF1Q8WWN9 437 aaPredicted RBP8.3□□□□□ -1.08
RFFL-210ENST00000582308 NANOS1Q8WY41 292 aaKnown RBP8.3□□□□□ -1.08
RFFL-210ENST00000582308 HSD17B8Q92506 261 aa8.3□□□□□ -1.08
RFFL-210ENST00000582308 MYDGFQ969H8 173 aa8.3□□□□□ -1.08
RFFL-210ENST00000582308 MUCL1Q96DR8 90 aa8.3□□□□□ -1.08
RFFL-210ENST00000582308 SLAMF6Q96DU3 332 aa8.3□□□□□ -1.08
RFFL-210ENST00000582308 NR1H4Q96RI1 486 aaPredicted RBP8.3□□□□□ -1.08
RFFL-210ENST00000582308 MNTQ99583 582 aa8.3□□□□□ -1.08
RFFL-210ENST00000582308 USB1Q9BQ65 265 aaKnown RBP8.3□□□□□ -1.08
RFFL-210ENST00000582308 JAM3Q9BX67 310 aa8.3□□□□□ -1.08
RFFL-210ENST00000582308 TTTY10Q9BZA0 68 aa8.3□□□□□ -1.08
RFFL-210ENST00000582308 ERVK13-1Q9NX77 482 aa8.3□□□□□ -1.08
RFFL-210ENST00000582308 SLCO1C1Q9NYB5 712 aa8.3□□□□□ -1.08
RFFL-210ENST00000582308 CLEC2DQ9UHP7 191 aa8.3□□□□□ -1.08
RFFL-210ENST00000582308 BLOC1S6Q9UL45 172 aa8.3□□□□□ -1.08
RFFL-210ENST00000582308 AMDHD2Q9Y303 409 aa8.3□□□□□ -1.08
RFFL-210ENST00000582308 TMEM14AQ9Y6G1 99 aa8.3□□□□□ -1.08
RFFL-210ENST00000582308 GCN1Q92616 2671 aaKnown RBP8.3□□□□□ -1.08
RFFL-210ENST00000582308 OR6C6A6NF89 314 aa8.29□□□□□ -1.08
RFFL-210ENST00000582308 PSMD9O00233 223 aa8.29□□□□□ -1.08
RFFL-210ENST00000582308 RGS10O43665 173 aa8.29□□□□□ -1.08
RFFL-210ENST00000582308 SYNGR3O43761 229 aa8.29□□□□□ -1.08
RFFL-210ENST00000582308 DOK2O60496 412 aa8.29□□□□□ -1.08
RFFL-210ENST00000582308 IGLV1-44P01699 117 aa8.29□□□□□ -1.08
RFFL-210ENST00000582308 MT-ND2P03891 347 aa8.29□□□□□ -1.08
RFFL-210ENST00000582308 SERPINA5P05154 406 aa8.29□□□□□ -1.08
RFFL-210ENST00000582308 CELA3BP08861 270 aa8.29□□□□□ -1.08
RFFL-210ENST00000582308 PPP3CBP16298 524 aa8.29□□□□□ -1.08
RFFL-210ENST00000582308 ZNF14P17017 642 aaPredicted RBP8.29□□□□□ -1.08
RFFL-210ENST00000582308 EEF1B2P24534 225 aaKnown RBP8.29□□□□□ -1.08
RFFL-210ENST00000582308 APEX1P27695 318 aaKnown RBP8.29□□□□□ -1.08
RFFL-210ENST00000582308 HOXC12P31275 282 aa8.29□□□□□ -1.08
RFFL-210ENST00000582308 OPRL1P41146 370 aa8.29□□□□□ -1.08
RFFL-210ENST00000582308 IDH3GP51553 393 aaPredicted RBP8.29□□□□□ -1.08
RFFL-210ENST00000582308 GABARAPL2P60520 117 aa8.29□□□□□ -1.08
RFFL-210ENST00000582308 ACTC1P68032 377 aa8.29□□□□□ -1.08
RFFL-210ENST00000582308 ACTA1P68133 377 aa8.29□□□□□ -1.08
RFFL-210ENST00000582308 ROM1Q03395 351 aa8.29□□□□□ -1.08
RFFL-210ENST00000582308 GALEQ14376 348 aa8.29□□□□□ -1.08
RFFL-210ENST00000582308 IRF3Q14653 427 aa8.29□□□□□ -1.08
RFFL-210ENST00000582308 PPA1Q15181 289 aa8.29□□□□□ -1.08
RFFL-210ENST00000582308 RAB35Q15286 201 aa8.29□□□□□ -1.08
RFFL-210ENST00000582308 KCTD21Q4G0X4 260 aa8.29□□□□□ -1.08
RFFL-210ENST00000582308 ELFN2Q5R3F8 820 aa8.29□□□□□ -1.08
RFFL-210ENST00000582308 C1QTNF12Q5T7M4 302 aa8.29□□□□□ -1.08
RFFL-210ENST00000582308 ALKBH2Q6NS38 261 aa8.29□□□□□ -1.08
RFFL-210ENST00000582308 ZNF322Q6U7Q0 402 aaPredicted RBP8.29□□□□□ -1.08
RFFL-210ENST00000582308 FAM169BQ8N8A8 192 aa8.29□□□□□ -1.08
RFFL-210ENST00000582308 OR1F12Q8NHA8 337 aa8.29□□□□□ -1.08
RFFL-210ENST00000582308 LINC01560Q8TB33 94 aa8.29□□□□□ -1.08
RFFL-210ENST00000582308 ASB17Q8WXJ9 295 aa8.29□□□□□ -1.08
RFFL-210ENST00000582308 SLC7A6Q92536 515 aa8.29□□□□□ -1.08
RFFL-210ENST00000582308 ZC3HAV1LQ96H79 300 aaKnown RBP8.29□□□□□ -1.08
RFFL-210ENST00000582308 MS4A3Q96HJ5 214 aa8.29□□□□□ -1.08
RFFL-210ENST00000582308 OR8B4Q96RC9 309 aa8.29□□□□□ -1.08
RFFL-210ENST00000582308 CDCA4Q9BXL8 241 aa8.29□□□□□ -1.08
RFFL-210ENST00000582308 ELOVL3Q9HB03 270 aa8.29□□□□□ -1.08
RFFL-210ENST00000582308 INPP5EQ9NRR6 644 aa8.29□□□□□ -1.08
RFFL-210ENST00000582308 CENPMQ9NSP4 180 aa8.29□□□□□ -1.08
RFFL-210ENST00000582308 DDX28Q9NUL7 540 aaKnown RBP8.29□□□□□ -1.08
RFFL-210ENST00000582308 PLEK2Q9NYT0 353 aa8.29□□□□□ -1.08
RFFL-210ENST00000582308 NPAP1Q9NZP6 1156 aa8.29□□□□□ -1.08
RFFL-210ENST00000582308 CRNNQ9UBG3 495 aaPredicted RBP8.29□□□□□ -1.08
RFFL-210ENST00000582308 MRM2Q9UI43 246 aaKnown RBP8.29□□□□□ -1.08
RFFL-210ENST00000582308 EXOSC1Q9Y3B2 195 aaKnown RBP8.29□□□□□ -1.08
RFFL-210ENST00000582308 USP9YO00507 2555 aaPredicted RBP8.29□□□□□ -1.08
RFFL-210ENST00000582308 LOC100509620A0A075B734 347 aa8.28□□□□□ -1.08
RFFL-210ENST00000582308 IGHV1-18A0A0C4DH31 117 aa8.28□□□□□ -1.08
RFFL-210ENST00000582308 ZNF878C9JN71 531 aa8.28□□□□□ -1.08
RFFL-210ENST00000582308 PHYHO14832 338 aa8.28□□□□□ -1.08
RFFL-210ENST00000582308 TNFAIP8O95379 198 aa8.28□□□□□ -1.08
RFFL-210ENST00000582308 ABHD16AO95870 558 aa8.28□□□□□ -1.08
RFFL-210ENST00000582308 IGKV3-15P01624 115 aa8.28□□□□□ -1.08
RFFL-210ENST00000582308 DBHP09172 617 aa8.28□□□□□ -1.08
RFFL-210ENST00000582308 COX5BP10606 129 aa8.28□□□□□ -1.08
RFFL-210ENST00000582308 IGFBP2P18065 325 aa8.28□□□□□ -1.08
RFFL-210ENST00000582308 STOMP27105 288 aa8.28□□□□□ -1.08
RFFL-210ENST00000582308 HTR5AP47898 357 aa8.28□□□□□ -1.08
RFFL-210ENST00000582308 ZNF83P51522 516 aa8.28□□□□□ -1.08
RFFL-210ENST00000582308 OR12D2P58182 307 aa8.28□□□□□ -1.08
RFFL-210ENST00000582308 PLP2Q04941 152 aa8.28□□□□□ -1.08
RFFL-210ENST00000582308 EGR3Q06889 387 aa8.28□□□□□ -1.08
RFFL-210ENST00000582308 DOC2BQ14184 412 aa8.28□□□□□ -1.08
RFFL-210ENST00000582308 KRTAP27-1Q3LI81 207 aa8.28□□□□□ -1.08
RFFL-210ENST00000582308 CDONQ4KMG0 1287 aa8.28□□□□□ -1.08
RFFL-210ENST00000582308 RNLSQ5VYX0 342 aa8.28□□□□□ -1.08
RFFL-210ENST00000582308 KCTD18Q6PI47 426 aaPredicted RBP8.28□□□□□ -1.08
RFFL-210ENST00000582308 LRRN1Q6UXK5 716 aa8.28□□□□□ -1.08
RFFL-210ENST00000582308 RHOUQ7L0Q8 258 aa8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms