RNA–Protein interactions for RNA: ENST00000581525.1

SNORD55-201, Transcript of small nucleolar RNA, C/D box 55, humanhuman

BASIC

Gene SNORD55, Length 80 nt, Biotype snoRNA, Subcellular localisation Cytoplasm, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD55-201ENST00000581525 KDM4DQ6B0I6 523 aa10.82□□□□□ -0.68
SNORD55-201ENST00000581525 ARL9Q6T311 187 aa10.82□□□□□ -0.68
SNORD55-201ENST00000581525 RHOUQ7L0Q8 258 aa10.82□□□□□ -0.68
SNORD55-201ENST00000581525 CYB561A3Q8NBI2 242 aa10.82□□□□□ -0.68
SNORD55-201ENST00000581525 OR1F12Q8NHA8 337 aa10.82□□□□□ -0.68
SNORD55-201ENST00000581525 SYNPRQ8TBG9 265 aa10.82□□□□□ -0.68
SNORD55-201ENST00000581525 TEX47Q8TBZ9 253 aa10.82□□□□□ -0.68
SNORD55-201ENST00000581525 C10orf105Q8TEF2 133 aa10.82□□□□□ -0.68
SNORD55-201ENST00000581525 OSBPL10Q9BXB5 764 aa10.82□□□□□ -0.68
SNORD55-201ENST00000581525 REG4Q9BYZ8 158 aa10.82□□□□□ -0.68
SNORD55-201ENST00000581525 HDHD2Q9H0R4 259 aa10.82□□□□□ -0.68
SNORD55-201ENST00000581525 RAB1BQ9H0U4 201 aa10.82□□□□□ -0.68
SNORD55-201ENST00000581525 PNRC2Q9NPJ4 139 aaKnown RBP10.82□□□□□ -0.68
SNORD55-201ENST00000581525 SLCO1C1Q9NYB5 712 aa10.82□□□□□ -0.68
SNORD55-201ENST00000581525 PLEK2Q9NYT0 353 aa10.82□□□□□ -0.68
SNORD55-201ENST00000581525 MYEF2Q9P2K5 600 aaKnown RBP10.82□□□□□ -0.68
SNORD55-201ENST00000581525 ANK3Q12955 4377 aaKnown RBP10.81□□□□□ -0.68
SNORD55-201ENST00000581525 FAM171A2A8MVW0 826 aa10.81□□□□□ -0.68
SNORD55-201ENST00000581525 G3V2T6 193 aa10.81□□□□□ -0.68
SNORD55-201ENST00000581525 H3BNX3 289 aa10.81□□□□□ -0.68
SNORD55-201ENST00000581525 H7C1Q1 480 aa10.81□□□□□ -0.68
SNORD55-201ENST00000581525 M0R233 179 aa10.81□□□□□ -0.68
SNORD55-201ENST00000581525 SURF4O15260 269 aa10.81□□□□□ -0.68
SNORD55-201ENST00000581525 SSX4O60224 188 aa10.81□□□□□ -0.68
SNORD55-201ENST00000581525 DOK2O60496 412 aa10.81□□□□□ -0.68
SNORD55-201ENST00000581525 CIB2O75838 187 aa10.81□□□□□ -0.68
SNORD55-201ENST00000581525 CLPTM1O96005 669 aa10.81□□□□□ -0.68
SNORD55-201ENST00000581525 ADRA2AP08913 450 aa10.81□□□□□ -0.68
SNORD55-201ENST00000581525 SLC25A16P16260 332 aa10.81□□□□□ -0.68
SNORD55-201ENST00000581525 SPI1P17947 270 aa10.81□□□□□ -0.68
SNORD55-201ENST00000581525 GIFP27352 417 aa10.81□□□□□ -0.68
SNORD55-201ENST00000581525 OTX1P32242 354 aaPredicted RBP10.81□□□□□ -0.68
SNORD55-201ENST00000581525 MMP15P51511 669 aa10.81□□□□□ -0.68
SNORD55-201ENST00000581525 NUDT6P53370 316 aa10.81□□□□□ -0.68
SNORD55-201ENST00000581525 CRISP1P54107 249 aa10.81□□□□□ -0.68
SNORD55-201ENST00000581525 KLF3P57682 345 aaPredicted RBP10.81□□□□□ -0.68
SNORD55-201ENST00000581525 SELENOVP59797 346 aa10.81□□□□□ -0.68
SNORD55-201ENST00000581525 ERVS71-1P61550 626 aa10.81□□□□□ -0.68
SNORD55-201ENST00000581525 MRPS11P82912 194 aaKnown RBP10.81□□□□□ -0.68
SNORD55-201ENST00000581525 DBPQ10586 325 aaPredicted RBP10.81□□□□□ -0.68
SNORD55-201ENST00000581525 ECH1Q13011 328 aa10.81□□□□□ -0.68
SNORD55-201ENST00000581525 ZNF718Q3SXZ3 478 aa10.81□□□□□ -0.68
SNORD55-201ENST00000581525 TMEM255AQ5JRV8 349 aa10.81□□□□□ -0.68
SNORD55-201ENST00000581525 OR1J1Q8NGS3 322 aa10.81□□□□□ -0.68
SNORD55-201ENST00000581525 KLF14Q8TD94 323 aaPredicted RBP10.81□□□□□ -0.68
SNORD55-201ENST00000581525 LRTOMTQ8WZ04 291 aa10.81□□□□□ -0.68
SNORD55-201ENST00000581525 CENPNQ96H22 339 aaPredicted RBP10.81□□□□□ -0.68
SNORD55-201ENST00000581525 COG8Q96MW5 612 aa10.81□□□□□ -0.68
SNORD55-201ENST00000581525 FN3KQ9H479 309 aa10.81□□□□□ -0.68
SNORD55-201ENST00000581525 RERGLQ9H628 205 aa10.81□□□□□ -0.68
SNORD55-201ENST00000581525 NF1P21359 2839 aa10.81□□□□□ -0.68
SNORD55-201ENST00000581525 IGHV4-30-2A0A087WSY4 118 aa10.8□□□□□ -0.68
SNORD55-201ENST00000581525 LOC390937A0A1W2PQ73 354 aa10.8□□□□□ -0.68
SNORD55-201ENST00000581525 RIIAD1A6NNX1 92 aa10.8□□□□□ -0.68
SNORD55-201ENST00000581525 H3BN98 237 aa10.8□□□□□ -0.68
SNORD55-201ENST00000581525 GLCEO94923 617 aa10.8□□□□□ -0.68
SNORD55-201ENST00000581525 LCKP06239 509 aa10.8□□□□□ -0.68
SNORD55-201ENST00000581525 ZNF3P17036 446 aa10.8□□□□□ -0.68
SNORD55-201ENST00000581525 CCNOP22674 350 aa10.8□□□□□ -0.68
SNORD55-201ENST00000581525 FMO3P31513 532 aa10.8□□□□□ -0.68
SNORD55-201ENST00000581525 PYCR1P32322 319 aa10.8□□□□□ -0.68
SNORD55-201ENST00000581525 HTR5AP47898 357 aa10.8□□□□□ -0.68
SNORD55-201ENST00000581525 RGS6P49758 472 aa10.8□□□□□ -0.68
SNORD55-201ENST00000581525 PPP1CBP62140 327 aa10.8□□□□□ -0.68
SNORD55-201ENST00000581525 LOXL1Q08397 574 aaPredicted RBP10.8□□□□□ -0.68
SNORD55-201ENST00000581525 OTPQ5XKR4 325 aa10.8□□□□□ -0.68
SNORD55-201ENST00000581525 ZFP1Q6P2D0 407 aa10.8□□□□□ -0.68
SNORD55-201ENST00000581525 CLEC2AQ6UVW9 174 aa10.8□□□□□ -0.68
SNORD55-201ENST00000581525 ZDHHC13Q8IUH4 622 aa10.8□□□□□ -0.68
SNORD55-201ENST00000581525 C10orf67Q8IYJ2 551 aa10.8□□□□□ -0.68
SNORD55-201ENST00000581525 ZCCHC24Q8N2G6 241 aaKnown RBP10.8□□□□□ -0.68
SNORD55-201ENST00000581525 ZNF786Q8N393 782 aa10.8□□□□□ -0.68
SNORD55-201ENST00000581525 ZNF525Q8N782 197 aa10.8□□□□□ -0.68
SNORD55-201ENST00000581525 ATG16L2Q8NAA4 619 aa10.8□□□□□ -0.68
SNORD55-201ENST00000581525 OR10S1Q8NGN2 331 aa10.8□□□□□ -0.68
SNORD55-201ENST00000581525 SLC25A40Q8TBP6 338 aa10.8□□□□□ -0.68
SNORD55-201ENST00000581525 HAVCR1Q96D42 359 aa10.8□□□□□ -0.68
SNORD55-201ENST00000581525 MAP6Q96JE9 813 aa10.8□□□□□ -0.68
SNORD55-201ENST00000581525 VRK1Q99986 396 aaPredicted RBP10.8□□□□□ -0.68
SNORD55-201ENST00000581525 SYT3Q9BQG1 590 aa10.8□□□□□ -0.68
SNORD55-201ENST00000581525 RHNO1Q9BSD3 238 aa10.8□□□□□ -0.68
SNORD55-201ENST00000581525 HCAR1Q9BXC0 346 aa10.8□□□□□ -0.68
SNORD55-201ENST00000581525 C1QTNF5Q9BXJ0 243 aa10.8□□□□□ -0.68
SNORD55-201ENST00000581525 OR2J1Q9GZK6 312 aa10.8□□□□□ -0.68
SNORD55-201ENST00000581525 PAPOLBQ9NRJ5 636 aaKnown RBP10.8□□□□□ -0.68
SNORD55-201ENST00000581525 DDX28Q9NUL7 540 aaKnown RBP10.8□□□□□ -0.68
SNORD55-201ENST00000581525 TAAR3PQ9P1P4 343 aa10.8□□□□□ -0.68
SNORD55-201ENST00000581525 CGGBP1Q9UFW8 167 aaPredicted RBP10.8□□□□□ -0.68
SNORD55-201ENST00000581525 TMEFF2Q9UIK5 374 aaPredicted RBP10.8□□□□□ -0.68
SNORD55-201ENST00000581525 GPR160Q9UJ42 338 aa10.8□□□□□ -0.68
SNORD55-201ENST00000581525 STARD10Q9Y365 291 aa10.8□□□□□ -0.68
SNORD55-201ENST00000581525 A0A1B0GWJ7 208 aa10.79□□□□□ -0.68
SNORD55-201ENST00000581525 C17orf100A8MU93 164 aa10.79□□□□□ -0.68
SNORD55-201ENST00000581525 E9PQ18 207 aa10.79□□□□□ -0.68
SNORD55-201ENST00000581525 CLUP10909 449 aa10.79□□□□□ -0.68
SNORD55-201ENST00000581525 ZNF823P16415 610 aa10.79□□□□□ -0.68
SNORD55-201ENST00000581525 KITLGP21583 273 aa10.79□□□□□ -0.68
SNORD55-201ENST00000581525 SLC2A5P22732 501 aa10.79□□□□□ -0.68
SNORD55-201ENST00000581525 LIPAP38571 399 aa10.79□□□□□ -0.68
SNORD55-201ENST00000581525 PDLIM4P50479 330 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms