RNA–Protein interactions for RNA: ENST00000581108.5

CSNK1D-216, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 607 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-216ENST00000581108 MTX3Q5HYI7 312 aa18.05■□□□□ 0.48
CSNK1D-216ENST00000581108 LIPNQ5VXI9 398 aa18.05■□□□□ 0.48
CSNK1D-216ENST00000581108 ACSM5Q6NUN0 579 aa18.05■□□□□ 0.48
CSNK1D-216ENST00000581108 C1orf94Q6P1W5 598 aa18.05■□□□□ 0.48
CSNK1D-216ENST00000581108 FAHD2BQ6P2I3 314 aaPredicted RBP18.05■□□□□ 0.48
CSNK1D-216ENST00000581108 PGAM4Q8N0Y7 254 aa18.05■□□□□ 0.48
CSNK1D-216ENST00000581108 RFLNBQ8N5W9 214 aa18.05■□□□□ 0.48
CSNK1D-216ENST00000581108 FAHD2AQ96GK7 314 aa18.05■□□□□ 0.48
CSNK1D-216ENST00000581108 ERMAPQ96PL5 475 aaPredicted RBP18.05■□□□□ 0.48
CSNK1D-216ENST00000581108 CGGBP1Q9UFW8 167 aaPredicted RBP18.05■□□□□ 0.48
CSNK1D-216ENST00000581108 TAGLN3Q9UI15 199 aa18.05■□□□□ 0.48
CSNK1D-216ENST00000581108 MAGEL2Q9UJ55 1249 aa18.05■□□□□ 0.48
CSNK1D-216ENST00000581108 TRAV20A0A0B4J274 112 aa18.04■□□□□ 0.48
CSNK1D-216ENST00000581108 DCTN6O00399 190 aa18.04■□□□□ 0.48
CSNK1D-216ENST00000581108 ARPC2O15144 300 aa18.04■□□□□ 0.48
CSNK1D-216ENST00000581108 RER1O15258 196 aa18.04■□□□□ 0.48
CSNK1D-216ENST00000581108 PLPP2O43688 288 aa18.04■□□□□ 0.48
CSNK1D-216ENST00000581108 DEAF1O75398 565 aaPredicted RBP18.04■□□□□ 0.48
CSNK1D-216ENST00000581108 ANPEPP15144 967 aa18.04■□□□□ 0.48
CSNK1D-216ENST00000581108 GSTM3P21266 225 aa18.04■□□□□ 0.48
CSNK1D-216ENST00000581108 CENPAP49450 140 aa18.04■□□□□ 0.48
CSNK1D-216ENST00000581108 DBPQ10586 325 aaPredicted RBP18.04■□□□□ 0.48
CSNK1D-216ENST00000581108 KCNMB1Q16558 191 aa18.04■□□□□ 0.48
CSNK1D-216ENST00000581108 SAMD4BQ5PRF9 694 aaKnown RBP18.04■□□□□ 0.48
CSNK1D-216ENST00000581108 PIGWQ7Z7B1 504 aa18.04■□□□□ 0.48
CSNK1D-216ENST00000581108 NPEPL1Q8NDH3 523 aa18.04■□□□□ 0.48
CSNK1D-216ENST00000581108 OR1F12Q8NHA8 337 aa18.04■□□□□ 0.48
CSNK1D-216ENST00000581108 CMBLQ96DG6 245 aa18.04■□□□□ 0.48
CSNK1D-216ENST00000581108 TIMD4Q96H15 378 aa18.04■□□□□ 0.48
CSNK1D-216ENST00000581108 NSMCE2Q96MF7 247 aa18.04■□□□□ 0.48
CSNK1D-216ENST00000581108 DIRC2Q96SL1 478 aa18.04■□□□□ 0.48
CSNK1D-216ENST00000581108 METTL17Q9H7H0 456 aaPredicted RBP18.04■□□□□ 0.48
CSNK1D-216ENST00000581108 METRNQ9UJH8 293 aa18.04■□□□□ 0.48
CSNK1D-216ENST00000581108 PURGQ9UJV8 347 aaKnown RBP18.04■□□□□ 0.48
CSNK1D-216ENST00000581108 OR6C6A6NF89 314 aa18.03■□□□□ 0.48
CSNK1D-216ENST00000581108 TCF21O43680 179 aa18.03■□□□□ 0.48
CSNK1D-216ENST00000581108 IGHV2-5P01817 119 aa18.03■□□□□ 0.48
CSNK1D-216ENST00000581108 CD55P08174 381 aa18.03■□□□□ 0.48
CSNK1D-216ENST00000581108 DBHP09172 617 aa18.03■□□□□ 0.48
CSNK1D-216ENST00000581108 TUBG1P23258 451 aa18.03■□□□□ 0.48
CSNK1D-216ENST00000581108 RBMXP38159 391 aaKnown RBP18.03■□□□□ 0.48
CSNK1D-216ENST00000581108 GNGT1P63211 74 aa18.03■□□□□ 0.48
CSNK1D-216ENST00000581108 TNFAIP6P98066 277 aaPredicted RBP18.03■□□□□ 0.48
CSNK1D-216ENST00000581108 CDK5R2Q13319 367 aa18.03■□□□□ 0.48
CSNK1D-216ENST00000581108 MEP1BQ16820 701 aa18.03■□□□□ 0.48
CSNK1D-216ENST00000581108 RFX4Q33E94 735 aa18.03■□□□□ 0.48
CSNK1D-216ENST00000581108 ZMAT1Q5H9K5 638 aa18.03■□□□□ 0.48
CSNK1D-216ENST00000581108 ZNF771Q7L3S4 317 aaPredicted RBP18.03■□□□□ 0.48
CSNK1D-216ENST00000581108 ZSCAN2Q7Z7L9 614 aaPredicted RBP18.03■□□□□ 0.48
CSNK1D-216ENST00000581108 FANK1Q8TC84 345 aa18.03■□□□□ 0.48
CSNK1D-216ENST00000581108 MCUR1Q96AQ8 359 aa18.03■□□□□ 0.48
CSNK1D-216ENST00000581108 RAB39BQ96DA2 213 aa18.03■□□□□ 0.48
CSNK1D-216ENST00000581108 OR52D1Q9H346 318 aa18.03■□□□□ 0.48
CSNK1D-216ENST00000581108 SRA1Q9HD15 236 aaKnown RBP18.03■□□□□ 0.48
CSNK1D-216ENST00000581108 TUBG2Q9NRH3 451 aa18.03■□□□□ 0.48
CSNK1D-216ENST00000581108 ARL2BPQ9Y2Y0 163 aa18.03■□□□□ 0.48
CSNK1D-216ENST00000581108 OR10H3O60404 316 aa18.02■□□□□ 0.48
CSNK1D-216ENST00000581108 FABP3P05413 133 aa18.02■□□□□ 0.48
CSNK1D-216ENST00000581108 KITLGP21583 273 aa18.02■□□□□ 0.48
CSNK1D-216ENST00000581108 CRABP1P29762 137 aa18.02■□□□□ 0.48
CSNK1D-216ENST00000581108 Q6ZR03 302 aa18.02■□□□□ 0.48
CSNK1D-216ENST00000581108 OR6V1Q8N148 313 aa18.02■□□□□ 0.48
CSNK1D-216ENST00000581108 HAVCR1Q96D42 359 aa18.02■□□□□ 0.48
CSNK1D-216ENST00000581108 NMNAT3Q96T66 252 aa18.02■□□□□ 0.48
CSNK1D-216ENST00000581108 OCEL1Q9H607 264 aa18.02■□□□□ 0.48
CSNK1D-216ENST00000581108 G6PC2Q9NQR9 355 aa18.02■□□□□ 0.48
CSNK1D-216ENST00000581108 DCAF16Q9NXF7 216 aa18.02■□□□□ 0.48
CSNK1D-216ENST00000581108 B9D1Q9UPM9 204 aa18.02■□□□□ 0.48
CSNK1D-216ENST00000581108 IGLV1-36A0A0B4J1U3 117 aa18.01■□□□□ 0.47
CSNK1D-216ENST00000581108 AVPP01185 164 aa18.01■□□□□ 0.47
CSNK1D-216ENST00000581108 FPR3P25089 353 aa18.01■□□□□ 0.47
CSNK1D-216ENST00000581108 RRM2P31350 389 aa18.01■□□□□ 0.47
CSNK1D-216ENST00000581108 SLC6A6P31641 620 aa18.01■□□□□ 0.47
CSNK1D-216ENST00000581108 ERFP50548 548 aa18.01■□□□□ 0.47
CSNK1D-216ENST00000581108 SLC3A1Q07837 685 aa18.01■□□□□ 0.47
CSNK1D-216ENST00000581108 LEG1Q6P5S2 330 aa18.01■□□□□ 0.47
CSNK1D-216ENST00000581108 SHQ1Q6PI26 577 aaKnown RBP18.01■□□□□ 0.47
CSNK1D-216ENST00000581108 C1orf229Q6ZS94 237 aaPredicted RBP18.01■□□□□ 0.47
CSNK1D-216ENST00000581108 DEFB107AQ8IZN7 70 aa18.01■□□□□ 0.47
CSNK1D-216ENST00000581108 OR2Z1Q8NG97 314 aa18.01■□□□□ 0.47
CSNK1D-216ENST00000581108 OR4K13Q8NH42 304 aa18.01■□□□□ 0.47
CSNK1D-216ENST00000581108 PTP4A1Q93096 173 aa18.01■□□□□ 0.47
CSNK1D-216ENST00000581108 SAMD8Q96LT4 415 aa18.01■□□□□ 0.47
CSNK1D-216ENST00000581108 GAL3ST1Q99999 423 aa18.01■□□□□ 0.47
CSNK1D-216ENST00000581108 IFT27Q9BW83 186 aa18.01■□□□□ 0.47
CSNK1D-216ENST00000581108 IL1RAPQ9NPH3 570 aa18.01■□□□□ 0.47
CSNK1D-216ENST00000581108 POLR1DQ9Y2S0 133 aa18.01■□□□□ 0.47
CSNK1D-216ENST00000581108 LHFPL6Q9Y693 200 aa18.01■□□□□ 0.47
CSNK1D-216ENST00000581108 ISPDA4D126 451 aa18■□□□□ 0.47
CSNK1D-216ENST00000581108 ARPC3O15145 178 aa18■□□□□ 0.47
CSNK1D-216ENST00000581108 PNPP00491 289 aa18■□□□□ 0.47
CSNK1D-216ENST00000581108 HIST1H1CP16403 213 aaKnown RBP18■□□□□ 0.47
CSNK1D-216ENST00000581108 HIST1H3AP68431 136 aa18■□□□□ 0.47
CSNK1D-216ENST00000581108 HLXQ14774 488 aaPredicted RBP18■□□□□ 0.47
CSNK1D-216ENST00000581108 HIST2H3PS2Q5TEC6 136 aa18■□□□□ 0.47
CSNK1D-216ENST00000581108 DNM1P34Q6PK57 102 aa18■□□□□ 0.47
CSNK1D-216ENST00000581108 CORO6Q6QEF8 472 aa18■□□□□ 0.47
CSNK1D-216ENST00000581108 C16orf89Q6UX73 402 aa18■□□□□ 0.47
CSNK1D-216ENST00000581108 HIST2H3AQ71DI3 136 aa18■□□□□ 0.47
CSNK1D-216ENST00000581108 JAZF1Q86VZ6 243 aa18■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms