RNA–Protein interactions for RNA: ENST00000578733.5

CDK5RAP3-210, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 2

Gene CDK5RAP3, Length 578 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-210ENST00000578733 MMP7P09237 267 aaPredicted RBP9.82□□□□□ -0.84
CDK5RAP3-210ENST00000578733 PIPP12273 146 aaPredicted RBP9.82□□□□□ -0.84
CDK5RAP3-210ENST00000578733 CRYGSP22914 178 aa9.82□□□□□ -0.84
CDK5RAP3-210ENST00000578733 HSD11B1P28845 292 aa9.82□□□□□ -0.84
CDK5RAP3-210ENST00000578733 HTR5AP47898 357 aa9.82□□□□□ -0.84
CDK5RAP3-210ENST00000578733 GDI2P50395 445 aaKnown RBP9.82□□□□□ -0.84
CDK5RAP3-210ENST00000578733 IDH3GP51553 393 aaPredicted RBP9.82□□□□□ -0.84
CDK5RAP3-210ENST00000578733 GRB2P62993 217 aaKnown RBP9.82□□□□□ -0.84
CDK5RAP3-210ENST00000578733 PSG4Q00888 419 aa9.82□□□□□ -0.84
CDK5RAP3-210ENST00000578733 GALK2Q01415 458 aa9.82□□□□□ -0.84
CDK5RAP3-210ENST00000578733 ELFN2Q5R3F8 820 aa9.82□□□□□ -0.84
CDK5RAP3-210ENST00000578733 RBM48Q5RL73 367 aaKnown RBP9.82□□□□□ -0.84
CDK5RAP3-210ENST00000578733 C6orf141Q5SZD1 244 aa9.82□□□□□ -0.84
CDK5RAP3-210ENST00000578733 CORO6Q6QEF8 472 aa9.82□□□□□ -0.84
CDK5RAP3-210ENST00000578733 LYPD4Q6UWN0 246 aa9.82□□□□□ -0.84
CDK5RAP3-210ENST00000578733 B3GLCTQ6Y288 498 aa9.82□□□□□ -0.84
CDK5RAP3-210ENST00000578733 RHOUQ7L0Q8 258 aa9.82□□□□□ -0.84
CDK5RAP3-210ENST00000578733 FAM220AQ7Z4H9 259 aa9.82□□□□□ -0.84
CDK5RAP3-210ENST00000578733 KRT77Q7Z794 578 aa9.82□□□□□ -0.84
CDK5RAP3-210ENST00000578733 CDC20BQ86Y33 519 aa9.82□□□□□ -0.84
CDK5RAP3-210ENST00000578733 ZNF540Q8NDQ6 660 aa9.82□□□□□ -0.84
CDK5RAP3-210ENST00000578733 SLC30A7Q8NEW0 376 aa9.82□□□□□ -0.84
CDK5RAP3-210ENST00000578733 BPIFB6Q8NFQ5 453 aa9.82□□□□□ -0.84
CDK5RAP3-210ENST00000578733 OR10H4Q8NGA5 316 aa9.82□□□□□ -0.84
CDK5RAP3-210ENST00000578733 THEM6Q8WUY1 208 aa9.82□□□□□ -0.84
CDK5RAP3-210ENST00000578733 SPTSSAQ969W0 71 aa9.82□□□□□ -0.84
CDK5RAP3-210ENST00000578733 SLAMF6Q96DU3 332 aa9.82□□□□□ -0.84
CDK5RAP3-210ENST00000578733 RADILQ96JH8 1075 aa9.82□□□□□ -0.84
CDK5RAP3-210ENST00000578733 DCLRE1CQ96SD1 692 aaKnown RBP9.82□□□□□ -0.84
CDK5RAP3-210ENST00000578733 COQ7Q99807 217 aa9.82□□□□□ -0.84
CDK5RAP3-210ENST00000578733 COPS4Q9BT78 406 aa9.82□□□□□ -0.84
CDK5RAP3-210ENST00000578733 MROQ9BYG7 248 aa9.82□□□□□ -0.84
CDK5RAP3-210ENST00000578733 SP140LQ9H930 580 aa9.82□□□□□ -0.84
CDK5RAP3-210ENST00000578733 CDH20Q9HBT6 801 aa9.82□□□□□ -0.84
CDK5RAP3-210ENST00000578733 PLCXD1Q9NUJ7 323 aa9.82□□□□□ -0.84
CDK5RAP3-210ENST00000578733 ZNF224Q9NZL3 707 aa9.82□□□□□ -0.84
CDK5RAP3-210ENST00000578733 CNOT2Q9NZN8 540 aaKnown RBP9.82□□□□□ -0.84
CDK5RAP3-210ENST00000578733 CRIM1Q9NZV1 1036 aa9.82□□□□□ -0.84
CDK5RAP3-210ENST00000578733 AASSQ9UDR5 926 aa9.82□□□□□ -0.84
CDK5RAP3-210ENST00000578733 EXOGQ9Y2C4 368 aaKnown RBP9.82□□□□□ -0.84
CDK5RAP3-210ENST00000578733 SPEF1Q9Y4P9 236 aa9.82□□□□□ -0.84
CDK5RAP3-210ENST00000578733 C2CD3Q4AC94 2353 aa9.82□□□□□ -0.84
CDK5RAP3-210ENST00000578733 PKDREJQ9NTG1 2253 aa9.81□□□□□ -0.84
CDK5RAP3-210ENST00000578733 DAPL1A0PJW8 107 aa9.81□□□□□ -0.84
CDK5RAP3-210ENST00000578733 THBDP07204 575 aa9.81□□□□□ -0.84
CDK5RAP3-210ENST00000578733 CD3EP07766 207 aa9.81□□□□□ -0.84
CDK5RAP3-210ENST00000578733 H2BFMP0C1H6 154 aa9.81□□□□□ -0.84
CDK5RAP3-210ENST00000578733 CCDC159P0C7I6 412 aa9.81□□□□□ -0.84
CDK5RAP3-210ENST00000578733 PATE4P0C8F1 98 aa9.81□□□□□ -0.84
CDK5RAP3-210ENST00000578733 IGFBP2P18065 325 aa9.81□□□□□ -0.84
CDK5RAP3-210ENST00000578733 MYL12AP19105 171 aa9.81□□□□□ -0.84
CDK5RAP3-210ENST00000578733 STOMP27105 288 aa9.81□□□□□ -0.84
CDK5RAP3-210ENST00000578733 DCKP27707 260 aa9.81□□□□□ -0.84
CDK5RAP3-210ENST00000578733 TPTEP56180 551 aa9.81□□□□□ -0.84
CDK5RAP3-210ENST00000578733 HIST1H3AP68431 136 aa9.81□□□□□ -0.84
CDK5RAP3-210ENST00000578733 EGR3Q06889 387 aa9.81□□□□□ -0.84
CDK5RAP3-210ENST00000578733 RAB39AQ14964 217 aa9.81□□□□□ -0.84
CDK5RAP3-210ENST00000578733 HIST2H3PS2Q5TEC6 136 aa9.81□□□□□ -0.84
CDK5RAP3-210ENST00000578733 SP5Q6BEB4 398 aaPredicted RBP9.81□□□□□ -0.84
CDK5RAP3-210ENST00000578733 ZNF774Q6NX45 483 aa9.81□□□□□ -0.84
CDK5RAP3-210ENST00000578733 TMEM154Q6P9G4 183 aa9.81□□□□□ -0.84
CDK5RAP3-210ENST00000578733 SEZ6L2Q6UXD5 910 aa9.81□□□□□ -0.84
CDK5RAP3-210ENST00000578733 HIST2H3AQ71DI3 136 aa9.81□□□□□ -0.84
CDK5RAP3-210ENST00000578733 C1orf174Q8IYL3 243 aa9.81□□□□□ -0.84
CDK5RAP3-210ENST00000578733 STX19Q8N4C7 294 aa9.81□□□□□ -0.84
CDK5RAP3-210ENST00000578733 ACBD7Q8N6N7 88 aa9.81□□□□□ -0.84
CDK5RAP3-210ENST00000578733 OR1F12Q8NHA8 337 aa9.81□□□□□ -0.84
CDK5RAP3-210ENST00000578733 AKR7LQ8NHP1 331 aa9.81□□□□□ -0.84
CDK5RAP3-210ENST00000578733 MYDGFQ969H8 173 aa9.81□□□□□ -0.84
CDK5RAP3-210ENST00000578733 LGALS12Q96DT0 336 aa9.81□□□□□ -0.84
CDK5RAP3-210ENST00000578733 TMEM80Q96HE8 168 aa9.81□□□□□ -0.84
CDK5RAP3-210ENST00000578733 ATF6BQ99941 703 aa9.81□□□□□ -0.84
CDK5RAP3-210ENST00000578733 ABHD6Q9BV23 337 aa9.81□□□□□ -0.84
CDK5RAP3-210ENST00000578733 C1QTNF6Q9BXI9 259 aa9.81□□□□□ -0.84
CDK5RAP3-210ENST00000578733 NIPAL2Q9H841 368 aa9.81□□□□□ -0.84
CDK5RAP3-210ENST00000578733 AMBNQ9NP70 447 aa9.81□□□□□ -0.84
CDK5RAP3-210ENST00000578733 CENPMQ9NSP4 180 aa9.81□□□□□ -0.84
CDK5RAP3-210ENST00000578733 MRPS18AQ9NVS2 196 aaKnown RBP9.81□□□□□ -0.84
CDK5RAP3-210ENST00000578733 EIF3KQ9UBQ5 218 aaKnown RBP9.81□□□□□ -0.84
CDK5RAP3-210ENST00000578733 EXOSC1Q9Y3B2 195 aaKnown RBP9.81□□□□□ -0.84
CDK5RAP3-210ENST00000578733 IGHV1-18A0A0C4DH31 117 aa9.8□□□□□ -0.84
CDK5RAP3-210ENST00000578733 VSTM5A8MXK1 200 aa9.8□□□□□ -0.84
CDK5RAP3-210ENST00000578733 SLC1A7O00341 560 aa9.8□□□□□ -0.84
CDK5RAP3-210ENST00000578733 RER1O15258 196 aa9.8□□□□□ -0.84
CDK5RAP3-210ENST00000578733 ZNF254O75437 659 aa9.8□□□□□ -0.84
CDK5RAP3-210ENST00000578733 CLDN1O95832 211 aa9.8□□□□□ -0.84
CDK5RAP3-210ENST00000578733 IGLV1-44P01699 117 aa9.8□□□□□ -0.84
CDK5RAP3-210ENST00000578733 KRT8P05787 483 aa9.8□□□□□ -0.84
CDK5RAP3-210ENST00000578733 TACSTD2P09758 323 aa9.8□□□□□ -0.84
CDK5RAP3-210ENST00000578733 ZNF14P17017 642 aaPredicted RBP9.8□□□□□ -0.84
CDK5RAP3-210ENST00000578733 ALOX5APP20292 161 aa9.8□□□□□ -0.84
CDK5RAP3-210ENST00000578733 CCNOP22674 350 aa9.8□□□□□ -0.84
CDK5RAP3-210ENST00000578733 COL8A1P27658 744 aa9.8□□□□□ -0.84
CDK5RAP3-210ENST00000578733 APEX1P27695 318 aaKnown RBP9.8□□□□□ -0.84
CDK5RAP3-210ENST00000578733 RPS27P42677 84 aaKnown RBP9.8□□□□□ -0.84
CDK5RAP3-210ENST00000578733 RGS6P49758 472 aa9.8□□□□□ -0.84
CDK5RAP3-210ENST00000578733 RIDAP52758 137 aaKnown RBP9.8□□□□□ -0.84
CDK5RAP3-210ENST00000578733 ACTA2P62736 377 aa9.8□□□□□ -0.84
CDK5RAP3-210ENST00000578733 ACTG2P63267 376 aa9.8□□□□□ -0.84
CDK5RAP3-210ENST00000578733 DBPQ10586 325 aaPredicted RBP9.8□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms