RNA–Protein interactions for RNA: ENST00000576222.1

PCDHGB3-201, Transcript of protocadherin gamma subfamily B, 3, humanhuman

TSL 1 (best) BASIC

Gene PCDHGB3, Length 4,727 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB3-201ENST00000576222 PRDM7Q9NQW5 492 aa11.93□□□□□ -0.5
PCDHGB3-201ENST00000576222 A0A087WV62 115 aa11.93□□□□□ -0.5
PCDHGB3-201ENST00000576222 C9J4A7 227 aa11.93□□□□□ -0.5
PCDHGB3-201ENST00000576222 SDCBPO00560 298 aaPredicted RBP11.93□□□□□ -0.5
PCDHGB3-201ENST00000576222 BRINP1O60477 761 aa11.93□□□□□ -0.5
PCDHGB3-201ENST00000576222 H2AFB1P0C5Y9 115 aa11.93□□□□□ -0.5
PCDHGB3-201ENST00000576222 FOLR1P15328 257 aa11.93□□□□□ -0.5
PCDHGB3-201ENST00000576222 MTCP1P56278 107 aa11.93□□□□□ -0.5
PCDHGB3-201ENST00000576222 RAB4BP61018 213 aa11.93□□□□□ -0.5
PCDHGB3-201ENST00000576222 ZNF85Q03923 595 aa11.93□□□□□ -0.5
PCDHGB3-201ENST00000576222 OTPQ5XKR4 325 aa11.93□□□□□ -0.5
PCDHGB3-201ENST00000576222 FIP1L1Q6UN15 594 aaKnown RBP11.93□□□□□ -0.5
PCDHGB3-201ENST00000576222 LGI3Q8N145 548 aa11.93□□□□□ -0.5
PCDHGB3-201ENST00000576222 CHRDQ9H2X0 955 aa11.93□□□□□ -0.5
PCDHGB3-201ENST00000576222 MBD1Q9UIS9 605 aaPredicted RBP11.93□□□□□ -0.5
PCDHGB3-201ENST00000576222 FAM96BQ9Y3D0 163 aa11.93□□□□□ -0.5
PCDHGB3-201ENST00000576222 NHSL1Q5SYE7 1610 aa11.93□□□□□ -0.5
PCDHGB3-201ENST00000576222 HYAL3O43820 417 aaPredicted RBP11.92□□□□□ -0.5
PCDHGB3-201ENST00000576222 TK1P04183 234 aa11.92□□□□□ -0.5
PCDHGB3-201ENST00000576222 CNN3Q15417 329 aaKnown RBP11.92□□□□□ -0.5
PCDHGB3-201ENST00000576222 ETFDHQ16134 617 aa11.92□□□□□ -0.5
PCDHGB3-201ENST00000576222 C5orf46Q6UWT4 87 aa11.92□□□□□ -0.5
PCDHGB3-201ENST00000576222 TMEM182Q6ZP80 229 aaPredicted RBP11.92□□□□□ -0.5
PCDHGB3-201ENST00000576222 OVCH2Q7RTZ1 564 aa11.92□□□□□ -0.5
PCDHGB3-201ENST00000576222 GPR137CQ8N3F9 429 aa11.92□□□□□ -0.5
PCDHGB3-201ENST00000576222 KIR3DX1Q9H7L2 352 aa11.92□□□□□ -0.5
PCDHGB3-201ENST00000576222 MCM3APO60318 1980 aa11.92□□□□□ -0.5
PCDHGB3-201ENST00000576222 ZNF724A8MTY0 619 aa11.92□□□□□ -0.5
PCDHGB3-201ENST00000576222 SULT2B1O00204 365 aa11.92□□□□□ -0.5
PCDHGB3-201ENST00000576222 PHF1O43189 567 aaPredicted RBP11.92□□□□□ -0.5
PCDHGB3-201ENST00000576222 MT-ATP6P00846 226 aa11.92□□□□□ -0.5
PCDHGB3-201ENST00000576222 GNB3P16520 340 aa11.92□□□□□ -0.5
PCDHGB3-201ENST00000576222 CSNK1A1P48729 337 aa11.92□□□□□ -0.5
PCDHGB3-201ENST00000576222 EMDP50402 254 aa11.92□□□□□ -0.5
PCDHGB3-201ENST00000576222 EEF1A2Q05639 463 aaKnown RBP11.92□□□□□ -0.5
PCDHGB3-201ENST00000576222 C1orf87Q8N0U7 546 aa11.92□□□□□ -0.5
PCDHGB3-201ENST00000576222 TMEM217Q8N7C4 229 aa11.92□□□□□ -0.5
PCDHGB3-201ENST00000576222 MRPL43Q8N983 215 aaKnown RBP11.92□□□□□ -0.5
PCDHGB3-201ENST00000576222 LCORQ96JN0 433 aaPredicted RBP11.92□□□□□ -0.5
PCDHGB3-201ENST00000576222 C11orf49Q9H6J7 331 aa11.92□□□□□ -0.5
PCDHGB3-201ENST00000576222 SFXN1Q9H9B4 322 aa11.92□□□□□ -0.5
PCDHGB3-201ENST00000576222 LY75O60449 1722 aa11.92□□□□□ -0.5
PCDHGB3-201ENST00000576222 A8MVM7 634 aa11.92□□□□□ -0.5
PCDHGB3-201ENST00000576222 ACKR1Q16570 336 aa11.92□□□□□ -0.5
PCDHGB3-201ENST00000576222 OR51A4Q8NGJ6 313 aa11.92□□□□□ -0.5
PCDHGB3-201ENST00000576222 CCDC74AQ96AQ1 378 aa11.92□□□□□ -0.5
PCDHGB3-201ENST00000576222 KIRREL1Q96J84 757 aa11.92□□□□□ -0.5
PCDHGB3-201ENST00000576222 IL21Q9HBE4 155 aa11.92□□□□□ -0.5
PCDHGB3-201ENST00000576222 ZNF587BE7ETH6 402 aa11.92□□□□□ -0.5
PCDHGB3-201ENST00000576222 LILRB3O75022 631 aa11.92□□□□□ -0.5
PCDHGB3-201ENST00000576222 LILRB5O75023 590 aa11.92□□□□□ -0.5
PCDHGB3-201ENST00000576222 CTAG2O75638 210 aa11.92□□□□□ -0.5
PCDHGB3-201ENST00000576222 NTN1O95631 604 aa11.92□□□□□ -0.5
PCDHGB3-201ENST00000576222 SEMA4FO95754 770 aa11.92□□□□□ -0.5
PCDHGB3-201ENST00000576222 DDAH2O95865 285 aa11.92□□□□□ -0.5
PCDHGB3-201ENST00000576222 CXCL2P19875 107 aa11.92□□□□□ -0.5
PCDHGB3-201ENST00000576222 PHLDA2Q53GA4 152 aa11.92□□□□□ -0.5
PCDHGB3-201ENST00000576222 NXPE3Q969Y0 559 aa11.92□□□□□ -0.5
PCDHGB3-201ENST00000576222 CA10Q9NS85 328 aa11.92□□□□□ -0.5
PCDHGB3-201ENST00000576222 STRAPQ9Y3F4 350 aaKnown RBP11.92□□□□□ -0.5
PCDHGB3-201ENST00000576222 LOC101059915A0A1B0GWI6 518 aaPredicted RBP11.91□□□□□ -0.5
PCDHGB3-201ENST00000576222 STMND1H3BQB6 276 aa11.91□□□□□ -0.5
PCDHGB3-201ENST00000576222 MPC2O95563 127 aa11.91□□□□□ -0.5
PCDHGB3-201ENST00000576222 HLA-DQB1P01920 261 aa11.91□□□□□ -0.5
PCDHGB3-201ENST00000576222 DBHP09172 617 aa11.91□□□□□ -0.5
PCDHGB3-201ENST00000576222 SLC2A1P11166 492 aa11.91□□□□□ -0.5
PCDHGB3-201ENST00000576222 BIDP55957 195 aa11.91□□□□□ -0.5
PCDHGB3-201ENST00000576222 TMEM128Q5BJH2 165 aa11.91□□□□□ -0.5
PCDHGB3-201ENST00000576222 FAM181AQ8N9Y4 354 aa11.91□□□□□ -0.5
PCDHGB3-201ENST00000576222 SUMF1Q8NBK3 374 aa11.91□□□□□ -0.5
PCDHGB3-201ENST00000576222 OR6S1Q8NH40 331 aa11.91□□□□□ -0.5
PCDHGB3-201ENST00000576222 EMG1Q92979 244 aaKnown RBP11.91□□□□□ -0.5
PCDHGB3-201ENST00000576222 PLEKHA2Q9HB19 425 aa11.91□□□□□ -0.5
PCDHGB3-201ENST00000576222 ZFP64Q9NPA5 681 aa11.91□□□□□ -0.5
PCDHGB3-201ENST00000576222 ENY2Q9NPA8 101 aa11.91□□□□□ -0.5
PCDHGB3-201ENST00000576222 PCDHGA1Q9Y5H4 931 aa11.91□□□□□ -0.5
PCDHGB3-201ENST00000576222 F5P12259 2224 aa11.91□□□□□ -0.5
PCDHGB3-201ENST00000576222 OGG1O15527 345 aa11.91□□□□□ -0.5
PCDHGB3-201ENST00000576222 LAP3P28838 519 aa11.91□□□□□ -0.5
PCDHGB3-201ENST00000576222 SRPXP78539 464 aa11.91□□□□□ -0.5
PCDHGB3-201ENST00000576222 PPP1R1AQ13522 171 aa11.91□□□□□ -0.5
PCDHGB3-201ENST00000576222 RUNX2Q13950 521 aa11.91□□□□□ -0.5
PCDHGB3-201ENST00000576222 C1orf140Q5VVS0 124 aa11.91□□□□□ -0.5
PCDHGB3-201ENST00000576222 KCNIP4Q6PIL6 250 aa11.91□□□□□ -0.5
PCDHGB3-201ENST00000576222 C7orf61Q8IZ16 206 aa11.91□□□□□ -0.5
PCDHGB3-201ENST00000576222 SLC17A5Q9NRA2 495 aa11.91□□□□□ -0.5
PCDHGB3-201ENST00000576222 CYTIPO60759 359 aa11.91□□□□□ -0.5
PCDHGB3-201ENST00000576222 OR7C1O76099 320 aaPredicted RBP11.91□□□□□ -0.5
PCDHGB3-201ENST00000576222 GLI4P10075 376 aa11.91□□□□□ -0.5
PCDHGB3-201ENST00000576222 CTHP32929 405 aa11.91□□□□□ -0.5
PCDHGB3-201ENST00000576222 KCNAB1Q14722 419 aa11.91□□□□□ -0.5
PCDHGB3-201ENST00000576222 CPEB2Q7Z5Q1 589 aaKnown RBP11.91□□□□□ -0.5
PCDHGB3-201ENST00000576222 SPACA5Q96QH8 159 aa11.91□□□□□ -0.5
PCDHGB3-201ENST00000576222 ZNF251Q9BRH9 671 aa11.91□□□□□ -0.5
PCDHGB3-201ENST00000576222 TMPRSS13Q9BYE2 586 aa11.91□□□□□ -0.5
PCDHGB3-201ENST00000576222 SAMD10Q9BYL1 202 aa11.91□□□□□ -0.5
PCDHGB3-201ENST00000576222 TMPRSS5Q9H3S3 457 aa11.91□□□□□ -0.5
PCDHGB3-201ENST00000576222 GAB2Q9UQC2 676 aa11.91□□□□□ -0.5
PCDHGB3-201ENST00000576222 A0A0B4J2E0 115 aa11.91□□□□□ -0.5
PCDHGB3-201ENST00000576222 A0A1B0GX12 115 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms