RNA–Protein interactions for RNA: ENST00000575783.5

CTDNEP1-211, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 5

Gene CTDNEP1, Length 876 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-211ENST00000575783 TOR3AQ9H497 397 aa13.46□□□□□ -0.25
CTDNEP1-211ENST00000575783 SMURF2Q9HAU4 748 aa13.46□□□□□ -0.25
CTDNEP1-211ENST00000575783 TUBG2Q9NRH3 451 aa13.46□□□□□ -0.25
CTDNEP1-211ENST00000575783 INIPQ9NRY2 104 aa13.46□□□□□ -0.25
CTDNEP1-211ENST00000575783 NDRG4Q9ULP0 352 aaKnown RBP13.46□□□□□ -0.25
CTDNEP1-211ENST00000575783 SLC7A7Q9UM01 511 aa13.46□□□□□ -0.25
CTDNEP1-211ENST00000575783 NOTCH3Q9UM47 2321 aa13.46□□□□□ -0.26
CTDNEP1-211ENST00000575783 DOCK11Q5JSL3 2073 aa13.45□□□□□ -0.26
CTDNEP1-211ENST00000575783 BTBD17A6NE02 478 aa13.45□□□□□ -0.26
CTDNEP1-211ENST00000575783 ANKRD61A6NGH8 418 aa13.45□□□□□ -0.26
CTDNEP1-211ENST00000575783 BGNP21810 368 aa13.45□□□□□ -0.26
CTDNEP1-211ENST00000575783 GABRA5P31644 462 aa13.45□□□□□ -0.26
CTDNEP1-211ENST00000575783 TGFBR2P37173 567 aa13.45□□□□□ -0.26
CTDNEP1-211ENST00000575783 PMELP40967 661 aa13.45□□□□□ -0.26
CTDNEP1-211ENST00000575783 POLR2JP52435 117 aaKnown RBP13.45□□□□□ -0.26
CTDNEP1-211ENST00000575783 ARF6P62330 175 aa13.45□□□□□ -0.26
CTDNEP1-211ENST00000575783 IFFO1Q0D2I5 559 aa13.45□□□□□ -0.26
CTDNEP1-211ENST00000575783 SCARB2Q14108 478 aa13.45□□□□□ -0.26
CTDNEP1-211ENST00000575783 ARMC4Q5T2S8 1044 aa13.45□□□□□ -0.26
CTDNEP1-211ENST00000575783 SLC25A47Q6Q0C1 308 aa13.45□□□□□ -0.26
CTDNEP1-211ENST00000575783 MSANTD1Q6ZTZ1 278 aa13.45□□□□□ -0.26
CTDNEP1-211ENST00000575783 OR9I1Q8NGQ6 314 aa13.45□□□□□ -0.26
CTDNEP1-211ENST00000575783 OR13G1Q8NGZ3 307 aa13.45□□□□□ -0.26
CTDNEP1-211ENST00000575783 NMD3Q96D46 503 aaKnown RBP13.45□□□□□ -0.26
CTDNEP1-211ENST00000575783 LGALS13Q9UHV8 139 aa13.45□□□□□ -0.26
CTDNEP1-211ENST00000575783 HAO1Q9UJM8 370 aa13.45□□□□□ -0.26
CTDNEP1-211ENST00000575783 SIGLEC9Q9Y336 463 aa13.45□□□□□ -0.26
CTDNEP1-211ENST00000575783 A0A1W2PPL8 197 aa13.44□□□□□ -0.26
CTDNEP1-211ENST00000575783 F5H5P2 479 aa13.44□□□□□ -0.26
CTDNEP1-211ENST00000575783 BIRC5O15392 142 aa13.44□□□□□ -0.26
CTDNEP1-211ENST00000575783 LYPD3O95274 346 aa13.44□□□□□ -0.26
CTDNEP1-211ENST00000575783 MPIG6BO95866 241 aa13.44□□□□□ -0.26
CTDNEP1-211ENST00000575783 IRF2P14316 349 aa13.44□□□□□ -0.26
CTDNEP1-211ENST00000575783 FUT1P19526 365 aa13.44□□□□□ -0.26
CTDNEP1-211ENST00000575783 SLC6A2P23975 617 aa13.44□□□□□ -0.26
CTDNEP1-211ENST00000575783 HTR5AP47898 357 aa13.44□□□□□ -0.26
CTDNEP1-211ENST00000575783 STX3Q13277 289 aa13.44□□□□□ -0.26
CTDNEP1-211ENST00000575783 NPTX1Q15818 432 aa13.44□□□□□ -0.26
CTDNEP1-211ENST00000575783 OR2T2Q6IF00 324 aa13.44□□□□□ -0.26
CTDNEP1-211ENST00000575783 CCBE1Q6UXH8 406 aaPredicted RBP13.44□□□□□ -0.26
CTDNEP1-211ENST00000575783 RBM45Q8IUH3 476 aaKnown RBP13.44□□□□□ -0.26
CTDNEP1-211ENST00000575783 SLC30A8Q8IWU4 369 aa13.44□□□□□ -0.26
CTDNEP1-211ENST00000575783 GALNT4Q8N4A0 578 aa13.44□□□□□ -0.26
CTDNEP1-211ENST00000575783 PIP4P2Q8N4L2 257 aa13.44□□□□□ -0.26
CTDNEP1-211ENST00000575783 CLDN22Q8N7P3 220 aa13.44□□□□□ -0.26
CTDNEP1-211ENST00000575783 GOLGA6L1Q8N7Z2 621 aa13.44□□□□□ -0.26
CTDNEP1-211ENST00000575783 PNLDC1Q8NA58 520 aaKnown RBP13.44□□□□□ -0.26
CTDNEP1-211ENST00000575783 OR6T1Q8NGN1 323 aa13.44□□□□□ -0.26
CTDNEP1-211ENST00000575783 MOSPD2Q8NHP6 518 aa13.44□□□□□ -0.26
CTDNEP1-211ENST00000575783 ADAMTS16Q8TE57 1224 aa13.44□□□□□ -0.26
CTDNEP1-211ENST00000575783 RBP7Q96R05 134 aa13.44□□□□□ -0.26
CTDNEP1-211ENST00000575783 SEMA6AQ9H2E6 1030 aa13.44□□□□□ -0.26
CTDNEP1-211ENST00000575783 STX18Q9P2W9 335 aaKnown RBP13.44□□□□□ -0.26
CTDNEP1-211ENST00000575783 ERVK-18Q9QC07 812 aa13.44□□□□□ -0.26
CTDNEP1-211ENST00000575783 VPREB3Q9UKI3 123 aa13.44□□□□□ -0.26
CTDNEP1-211ENST00000575783 TMCC3Q9ULS5 477 aa13.44□□□□□ -0.26
CTDNEP1-211ENST00000575783 FOXJ3Q9UPW0 622 aa13.44□□□□□ -0.26
CTDNEP1-211ENST00000575783 USH1CQ9Y6N9 552 aa13.44□□□□□ -0.26
CTDNEP1-211ENST00000575783 TET2Q6N021 2002 aaPredicted RBP13.44□□□□□ -0.26
CTDNEP1-211ENST00000575783 C12orf71A8MTZ7 269 aa13.43□□□□□ -0.26
CTDNEP1-211ENST00000575783 XPNPEP2O43895 674 aa13.43□□□□□ -0.26
CTDNEP1-211ENST00000575783 FSTL3O95633 263 aa13.43□□□□□ -0.26
CTDNEP1-211ENST00000575783 RAC2P15153 192 aa13.43□□□□□ -0.26
CTDNEP1-211ENST00000575783 PSMB10P40306 273 aa13.43□□□□□ -0.26
CTDNEP1-211ENST00000575783 NPY4RP50391 375 aa13.43□□□□□ -0.26
CTDNEP1-211ENST00000575783 COX10Q12887 443 aa13.43□□□□□ -0.26
CTDNEP1-211ENST00000575783 ENDOGQ14249 297 aaKnown RBP13.43□□□□□ -0.26
CTDNEP1-211ENST00000575783 ZNF181Q2M3W8 571 aa13.43□□□□□ -0.26
CTDNEP1-211ENST00000575783 LYG1Q8N1E2 194 aa13.43□□□□□ -0.26
CTDNEP1-211ENST00000575783 OR8G5Q8NG78 346 aa13.43□□□□□ -0.26
CTDNEP1-211ENST00000575783 PHF21AQ96BD5 680 aa13.43□□□□□ -0.26
CTDNEP1-211ENST00000575783 ZNF582Q96NG8 517 aaPredicted RBP13.43□□□□□ -0.26
CTDNEP1-211ENST00000575783 SIRPDQ9H106 197 aa13.43□□□□□ -0.26
CTDNEP1-211ENST00000575783 PPA2Q9H2U2 334 aa13.43□□□□□ -0.26
CTDNEP1-211ENST00000575783 EVA1AQ9H8M9 152 aa13.43□□□□□ -0.26
CTDNEP1-211ENST00000575783 MEPEQ9NQ76 525 aaPredicted RBP13.43□□□□□ -0.26
CTDNEP1-211ENST00000575783 SLC25A37Q9NYZ2 338 aa13.43□□□□□ -0.26
CTDNEP1-211ENST00000575783 PTTG3PQ9NZH4 202 aa13.43□□□□□ -0.26
CTDNEP1-211ENST00000575783 ZIM2Q9NZV7 527 aa13.43□□□□□ -0.26
CTDNEP1-211ENST00000575783 FBLN5Q9UBX5 448 aa13.43□□□□□ -0.26
CTDNEP1-211ENST00000575783 PLXNB1O43157 2135 aa13.43□□□□□ -0.26
CTDNEP1-211ENST00000575783 LOC100653049A0A140TA62 436 aa13.42□□□□□ -0.26
CTDNEP1-211ENST00000575783 GMNCA6NCL1 334 aa13.42□□□□□ -0.26
CTDNEP1-211ENST00000575783 TRPC5OSA6NMA1 111 aa13.42□□□□□ -0.26
CTDNEP1-211ENST00000575783 KRT34O76011 436 aa13.42□□□□□ -0.26
CTDNEP1-211ENST00000575783 KITP10721 976 aa13.42□□□□□ -0.26
CTDNEP1-211ENST00000575783 NR2C1P13056 603 aa13.42□□□□□ -0.26
CTDNEP1-211ENST00000575783 HOXA4Q00056 320 aaPredicted RBP13.42□□□□□ -0.26
CTDNEP1-211ENST00000575783 TOP3AQ13472 1001 aaPredicted RBP13.42□□□□□ -0.26
CTDNEP1-211ENST00000575783 LAPTM4AQ15012 233 aa13.42□□□□□ -0.26
CTDNEP1-211ENST00000575783 DUSP7Q16829 419 aa13.42□□□□□ -0.26
CTDNEP1-211ENST00000575783 C1orf122Q6ZSJ8 110 aa13.42□□□□□ -0.26
CTDNEP1-211ENST00000575783 BHLHE23Q8NDY6 225 aa13.42□□□□□ -0.26
CTDNEP1-211ENST00000575783 SLC7A6Q92536 515 aa13.42□□□□□ -0.26
CTDNEP1-211ENST00000575783 MPP4Q96JB8 637 aa13.42□□□□□ -0.26
CTDNEP1-211ENST00000575783 COG8Q96MW5 612 aa13.42□□□□□ -0.26
CTDNEP1-211ENST00000575783 SLAMF8Q9P0V8 285 aa13.42□□□□□ -0.26
CTDNEP1-211ENST00000575783 CTSZQ9UBR2 303 aa13.42□□□□□ -0.26
CTDNEP1-211ENST00000575783 DNAH9Q9NYC9 4486 aa13.42□□□□□ -0.26
CTDNEP1-211ENST00000575783 TRAPPC13A5PLN9 417 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms