RNA–Protein interactions for RNA: ENST00000575663.5

SMG6-219, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 574 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-219ENST00000575663 CLRN1P58418 232 aa4.88□□□□□ -1.63
SMG6-219ENST00000575663 TAGLNQ01995 201 aaKnown RBP4.88□□□□□ -1.63
SMG6-219ENST00000575663 EMX1Q04741 257 aaPredicted RBP4.88□□□□□ -1.63
SMG6-219ENST00000575663 HNRNPA0Q13151 305 aaKnown RBP4.88□□□□□ -1.63
SMG6-219ENST00000575663 MS4A18Q3C1V0 323 aa4.88□□□□□ -1.63
SMG6-219ENST00000575663 NSUN5P1Q3KNT7 163 aa4.88□□□□□ -1.63
SMG6-219ENST00000575663 ZNF404Q494X3 552 aa4.88□□□□□ -1.63
SMG6-219ENST00000575663 ALG10BQ5I7T1 473 aa4.88□□□□□ -1.63
SMG6-219ENST00000575663 PABPC1L2AQ5JQF8 200 aa4.88□□□□□ -1.63
SMG6-219ENST00000575663 TMEM255AQ5JRV8 349 aa4.88□□□□□ -1.63
SMG6-219ENST00000575663 WDR25Q64LD2 544 aaPredicted RBP4.88□□□□□ -1.63
SMG6-219ENST00000575663 PGBD2Q6P3X8 592 aa4.88□□□□□ -1.63
SMG6-219ENST00000575663 EPGNQ6UW88 154 aa4.88□□□□□ -1.63
SMG6-219ENST00000575663 DCDC5Q6ZRR9 648 aa4.88□□□□□ -1.63
SMG6-219ENST00000575663 CCDC121Q6ZUS5 278 aa4.88□□□□□ -1.63
SMG6-219ENST00000575663 ALDH16A1Q8IZ83 802 aa4.88□□□□□ -1.63
SMG6-219ENST00000575663 LRRC18Q8N456 261 aa4.88□□□□□ -1.63
SMG6-219ENST00000575663 C10orf53Q8N6V4 93 aa4.88□□□□□ -1.63
SMG6-219ENST00000575663 LINC00469Q8N7U9 141 aa4.88□□□□□ -1.63
SMG6-219ENST00000575663 PNLDC1Q8NA58 520 aaKnown RBP4.88□□□□□ -1.63
SMG6-219ENST00000575663 AGR3Q8TD06 166 aa4.88□□□□□ -1.63
SMG6-219ENST00000575663 TSPEARQ8WU66 669 aa4.88□□□□□ -1.63
SMG6-219ENST00000575663 C10orf82Q8WW14 230 aa4.88□□□□□ -1.63
SMG6-219ENST00000575663 DNAJA4Q8WW22 397 aaPredicted RBP4.88□□□□□ -1.63
SMG6-219ENST00000575663 CFHR4Q92496 578 aa4.88□□□□□ -1.63
SMG6-219ENST00000575663 LHX4Q969G2 390 aa4.88□□□□□ -1.63
SMG6-219ENST00000575663 SLC35B4Q969S0 331 aa4.88□□□□□ -1.63
SMG6-219ENST00000575663 ITPKCQ96DU7 683 aa4.88□□□□□ -1.63
SMG6-219ENST00000575663 SLC25A44Q96H78 314 aaPredicted RBP4.88□□□□□ -1.63
SMG6-219ENST00000575663 TXNDC15Q96J42 360 aa4.88□□□□□ -1.63
SMG6-219ENST00000575663 MAELQ96JY0 434 aaKnown RBP4.88□□□□□ -1.63
SMG6-219ENST00000575663 POM121L2Q96KW2 1035 aa4.88□□□□□ -1.63
SMG6-219ENST00000575663 WDFY2Q96P53 400 aa4.88□□□□□ -1.63
SMG6-219ENST00000575663 TBX15Q96SF7 602 aa4.88□□□□□ -1.63
SMG6-219ENST00000575663 SORT1Q99523 831 aa4.88□□□□□ -1.63
SMG6-219ENST00000575663 TMEM246Q9BRR3 403 aa4.88□□□□□ -1.63
SMG6-219ENST00000575663 SPATA9Q9BWV2 254 aa4.88□□□□□ -1.63
SMG6-219ENST00000575663 CDADC1Q9BWV3 514 aa4.88□□□□□ -1.63
SMG6-219ENST00000575663 KRTAP17-1Q9BYP8 105 aa4.88□□□□□ -1.63
SMG6-219ENST00000575663 PPA2Q9H2U2 334 aa4.88□□□□□ -1.63
SMG6-219ENST00000575663 PAPOLBQ9NRJ5 636 aaKnown RBP4.88□□□□□ -1.63
SMG6-219ENST00000575663 ASIC5Q9NY37 505 aa4.88□□□□□ -1.63
SMG6-219ENST00000575663 IFT52Q9Y366 437 aa4.88□□□□□ -1.63
SMG6-219ENST00000575663 PCDHGB5Q9Y5G0 923 aa4.88□□□□□ -1.63
SMG6-219ENST00000575663 TET2Q6N021 2002 aaPredicted RBP4.88□□□□□ -1.63
SMG6-219ENST00000575663 TENM3Q9P273 2699 aa4.88□□□□□ -1.63
SMG6-219ENST00000575663 IGKV1D-42A0A075B6H8 117 aa4.87□□□□□ -1.63
SMG6-219ENST00000575663 A0A1B0GWA3 101 aa4.87□□□□□ -1.63
SMG6-219ENST00000575663 MCIDASD6RGH6 385 aa4.87□□□□□ -1.63
SMG6-219ENST00000575663 C11orf98E9PRG8 122 aa4.87□□□□□ -1.63
SMG6-219ENST00000575663 PLPP3O14495 311 aa4.87□□□□□ -1.63
SMG6-219ENST00000575663 ICMTO60725 284 aa4.87□□□□□ -1.63
SMG6-219ENST00000575663 FBXO24O75426 580 aa4.87□□□□□ -1.63
SMG6-219ENST00000575663 ZNF254O75437 659 aa4.87□□□□□ -1.63
SMG6-219ENST00000575663 ZNF205O95201 554 aa4.87□□□□□ -1.63
SMG6-219ENST00000575663 DUS4LO95620 317 aaKnown RBP4.87□□□□□ -1.63
SMG6-219ENST00000575663 KRT75O95678 551 aa4.87□□□□□ -1.63
SMG6-219ENST00000575663 ABHD16AO95870 558 aa4.87□□□□□ -1.63
SMG6-219ENST00000575663 CYB5R3P00387 301 aaPredicted RBP4.87□□□□□ -1.63
SMG6-219ENST00000575663 PAHP00439 452 aa4.87□□□□□ -1.63
SMG6-219ENST00000575663 MT-ATP6P00846 226 aa4.87□□□□□ -1.63
SMG6-219ENST00000575663 BGLAPP02818 100 aa4.87□□□□□ -1.63
SMG6-219ENST00000575663 CHRNGP07510 517 aa4.87□□□□□ -1.63
SMG6-219ENST00000575663 MMP7P09237 267 aaPredicted RBP4.87□□□□□ -1.63
SMG6-219ENST00000575663 QDPRP09417 244 aa4.87□□□□□ -1.63
SMG6-219ENST00000575663 NHLRC4P0CG21 123 aaPredicted RBP4.87□□□□□ -1.63
SMG6-219ENST00000575663 PGA4P0DJD7 388 aa4.87□□□□□ -1.63
SMG6-219ENST00000575663 PGA3P0DJD8 388 aa4.87□□□□□ -1.63
SMG6-219ENST00000575663 NR2C1P13056 603 aa4.87□□□□□ -1.63
SMG6-219ENST00000575663 IRF2P14316 349 aa4.87□□□□□ -1.63
SMG6-219ENST00000575663 IGLL1P15814 213 aa4.87□□□□□ -1.63
SMG6-219ENST00000575663 ZNF32P17041 273 aa4.87□□□□□ -1.63
SMG6-219ENST00000575663 TUBG1P23258 451 aa4.87□□□□□ -1.63
SMG6-219ENST00000575663 PRDX6P30041 224 aa4.87□□□□□ -1.63
SMG6-219ENST00000575663 SRP9P49458 86 aaKnown RBP4.87□□□□□ -1.63
SMG6-219ENST00000575663 EFNB2P52799 333 aa4.87□□□□□ -1.63
SMG6-219ENST00000575663 CLNS1AP54105 237 aaKnown RBP4.87□□□□□ -1.63
SMG6-219ENST00000575663 SLC35A2P78381 396 aa4.87□□□□□ -1.63
SMG6-219ENST00000575663 EMX2Q04743 252 aa4.87□□□□□ -1.63
SMG6-219ENST00000575663 LRRC74AQ0VAA2 488 aa4.87□□□□□ -1.63
SMG6-219ENST00000575663 BNIP1Q12981 228 aa4.87□□□□□ -1.63
SMG6-219ENST00000575663 MELKQ14680 651 aa4.87□□□□□ -1.63
SMG6-219ENST00000575663 KCNJ8Q15842 424 aa4.87□□□□□ -1.63
SMG6-219ENST00000575663 ZNF181Q2M3W8 571 aa4.87□□□□□ -1.63
SMG6-219ENST00000575663 UGT3A2Q3SY77 523 aa4.87□□□□□ -1.63
SMG6-219ENST00000575663 SLC35E4Q6ICL7 350 aa4.87□□□□□ -1.63
SMG6-219ENST00000575663 OGFOD2Q6N063 350 aa4.87□□□□□ -1.63
SMG6-219ENST00000575663 ULK3Q6PHR2 472 aa4.87□□□□□ -1.63
SMG6-219ENST00000575663 WDR88Q6ZMY6 472 aa4.87□□□□□ -1.63
SMG6-219ENST00000575663 C1orf122Q6ZSJ8 110 aa4.87□□□□□ -1.63
SMG6-219ENST00000575663 SLC35D2Q76EJ3 337 aa4.87□□□□□ -1.63
SMG6-219ENST00000575663 HDDC2Q7Z4H3 204 aa4.87□□□□□ -1.63
SMG6-219ENST00000575663 NANOGNBQ7Z5D8 188 aa4.87□□□□□ -1.63
SMG6-219ENST00000575663 NDUFA11Q86Y39 141 aa4.87□□□□□ -1.63
SMG6-219ENST00000575663 LSMEM1Q8N8F7 131 aa4.87□□□□□ -1.63
SMG6-219ENST00000575663 NOXO1Q8NFA2 376 aa4.87□□□□□ -1.63
SMG6-219ENST00000575663 OR5J2Q8NH18 312 aa4.87□□□□□ -1.63
SMG6-219ENST00000575663 NPRL2Q8WTW4 380 aa4.87□□□□□ -1.63
SMG6-219ENST00000575663 DPF1Q92782 380 aa4.87□□□□□ -1.63
SMG6-219ENST00000575663 TESCQ96BS2 214 aa4.87□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms