RNA–Protein interactions for RNA: ENST00000575426.1

LITAF-217, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 5

Gene LITAF, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-217ENST00000575426 C4orf45Q96LM5 186 aa13.11□□□□□ -0.31
LITAF-217ENST00000575426 HDHD2Q9H0R4 259 aa13.11□□□□□ -0.31
LITAF-217ENST00000575426 RIBC2Q9H4K1 309 aa13.11□□□□□ -0.31
LITAF-217ENST00000575426 BARX1Q9HBU1 254 aaPredicted RBP13.11□□□□□ -0.31
LITAF-217ENST00000575426 MRPL22Q9NWU5 206 aaKnown RBP13.11□□□□□ -0.31
LITAF-217ENST00000575426 H2AFY2Q9P0M6 372 aaPredicted RBP13.11□□□□□ -0.31
LITAF-217ENST00000575426 ATPIF1Q9UII2 106 aa13.11□□□□□ -0.31
LITAF-217ENST00000575426 DUSP13Q9UII6 198 aa13.11□□□□□ -0.31
LITAF-217ENST00000575426 GPR160Q9UJ42 338 aa13.11□□□□□ -0.31
LITAF-217ENST00000575426 GDF2Q9UK05 429 aaPredicted RBP13.11□□□□□ -0.31
LITAF-217ENST00000575426 GRIP1Q9Y3R0 1128 aa13.11□□□□□ -0.31
LITAF-217ENST00000575426 CSMD2Q7Z408 3487 aa13.11□□□□□ -0.31
LITAF-217ENST00000575426 CHD3Q12873 2000 aaKnown RBP13.1□□□□□ -0.31
LITAF-217ENST00000575426 ERICH4A6NGS2 130 aa13.1□□□□□ -0.31
LITAF-217ENST00000575426 ZAR1LA6NP61 321 aa13.1□□□□□ -0.31
LITAF-217ENST00000575426 ANKRD65E5RJM6 399 aa13.1□□□□□ -0.31
LITAF-217ENST00000575426 ZNF593O00488 134 aaPredicted RBP13.1□□□□□ -0.31
LITAF-217ENST00000575426 SYNGR3O43761 229 aa13.1□□□□□ -0.31
LITAF-217ENST00000575426 SPARCP09486 303 aa13.1□□□□□ -0.31
LITAF-217ENST00000575426 GSTT1P30711 240 aa13.1□□□□□ -0.31
LITAF-217ENST00000575426 GCH1P30793 250 aa13.1□□□□□ -0.31
LITAF-217ENST00000575426 EVX1P49640 407 aa13.1□□□□□ -0.31
LITAF-217ENST00000575426 ALDH3A2P51648 485 aa13.1□□□□□ -0.31
LITAF-217ENST00000575426 RPS7P62081 194 aaKnown RBP13.1□□□□□ -0.31
LITAF-217ENST00000575426 HIST1H3AP68431 136 aa13.1□□□□□ -0.31
LITAF-217ENST00000575426 ECH1Q13011 328 aa13.1□□□□□ -0.31
LITAF-217ENST00000575426 MST1LQ2TV78 715 aa13.1□□□□□ -0.31
LITAF-217ENST00000575426 ZNF718Q3SXZ3 478 aa13.1□□□□□ -0.31
LITAF-217ENST00000575426 SLC35D3Q5M8T2 416 aa13.1□□□□□ -0.31
LITAF-217ENST00000575426 HIST2H3PS2Q5TEC6 136 aa13.1□□□□□ -0.31
LITAF-217ENST00000575426 SLX4IPQ5VYV7 408 aa13.1□□□□□ -0.31
LITAF-217ENST00000575426 SLC18B1Q6NT16 456 aa13.1□□□□□ -0.31
LITAF-217ENST00000575426 ZBTB49Q6ZSB9 765 aa13.1□□□□□ -0.31
LITAF-217ENST00000575426 HIST2H3AQ71DI3 136 aa13.1□□□□□ -0.31
LITAF-217ENST00000575426 CXXC5Q7LFL8 322 aaKnown RBP13.1□□□□□ -0.31
LITAF-217ENST00000575426 ABHD4Q8TB40 342 aa13.1□□□□□ -0.31
LITAF-217ENST00000575426 SYNPRQ8TBG9 265 aa13.1□□□□□ -0.31
LITAF-217ENST00000575426 ZNRF4Q8WWF5 429 aa13.1□□□□□ -0.31
LITAF-217ENST00000575426 DCLRE1CQ96SD1 692 aaKnown RBP13.1□□□□□ -0.31
LITAF-217ENST00000575426 INTS14Q96SY0 518 aa13.1□□□□□ -0.31
LITAF-217ENST00000575426 COQ7Q99807 217 aa13.1□□□□□ -0.31
LITAF-217ENST00000575426 VRK1Q99986 396 aaPredicted RBP13.1□□□□□ -0.31
LITAF-217ENST00000575426 HCAR1Q9BXC0 346 aa13.1□□□□□ -0.31
LITAF-217ENST00000575426 DYNLRB1Q9NP97 96 aa13.1□□□□□ -0.31
LITAF-217ENST00000575426 HINT3Q9NQE9 182 aaKnown RBP13.1□□□□□ -0.31
LITAF-217ENST00000575426 CYB5R1Q9UHQ9 305 aa13.1□□□□□ -0.31
LITAF-217ENST00000575426 TMEFF2Q9UIK5 374 aaPredicted RBP13.1□□□□□ -0.31
LITAF-217ENST00000575426 COMMD3-BMI1R4GMX3 469 aa13.1□□□□□ -0.31
LITAF-217ENST00000575426 H7C417 338 aa13.09□□□□□ -0.31
LITAF-217ENST00000575426 EI24O14681 340 aa13.09□□□□□ -0.31
LITAF-217ENST00000575426 PRODHO43272 600 aa13.09□□□□□ -0.31
LITAF-217ENST00000575426 ERCC1P07992 297 aaPredicted RBP13.09□□□□□ -0.31
LITAF-217ENST00000575426 GGT2P36268 569 aa13.09□□□□□ -0.31
LITAF-217ENST00000575426 TAF13Q15543 124 aa13.09□□□□□ -0.31
LITAF-217ENST00000575426 TESK1Q15569 626 aa13.09□□□□□ -0.31
LITAF-217ENST00000575426 MOGQ16653 247 aa13.09□□□□□ -0.31
LITAF-217ENST00000575426 TEX30Q5JUR7 227 aa13.09□□□□□ -0.31
LITAF-217ENST00000575426 Q5PR19 223 aa13.09□□□□□ -0.31
LITAF-217ENST00000575426 PRSS57Q6UWY2 283 aa13.09□□□□□ -0.31
LITAF-217ENST00000575426 SPNS3Q6ZMD2 512 aa13.09□□□□□ -0.31
LITAF-217ENST00000575426 SHFQ7M4L6 423 aa13.09□□□□□ -0.31
LITAF-217ENST00000575426 ERI1Q8IV48 349 aaKnown RBP13.09□□□□□ -0.31
LITAF-217ENST00000575426 CBR4Q8N4T8 237 aa13.09□□□□□ -0.31
LITAF-217ENST00000575426 TCEANCQ8N8B7 351 aa13.09□□□□□ -0.31
LITAF-217ENST00000575426 OR6N2Q8NGY6 317 aa13.09□□□□□ -0.31
LITAF-217ENST00000575426 IPCEF1Q8WWN9 437 aaPredicted RBP13.09□□□□□ -0.31
LITAF-217ENST00000575426 EME1Q96AY2 570 aa13.09□□□□□ -0.31
LITAF-217ENST00000575426 COG8Q96MW5 612 aa13.09□□□□□ -0.31
LITAF-217ENST00000575426 ATF6BQ99941 703 aa13.09□□□□□ -0.31
LITAF-217ENST00000575426 SYT3Q9BQG1 590 aa13.09□□□□□ -0.31
LITAF-217ENST00000575426 MRPL37Q9BZE1 423 aaKnown RBP13.09□□□□□ -0.31
LITAF-217ENST00000575426 WDR76Q9H967 626 aa13.09□□□□□ -0.31
LITAF-217ENST00000575426 USE1Q9NZ43 259 aa13.09□□□□□ -0.31
LITAF-217ENST00000575426 FZR1Q9UM11 496 aa13.09□□□□□ -0.31
LITAF-217ENST00000575426 A0A1W2PPW3 197 aa13.08□□□□□ -0.32
LITAF-217ENST00000575426 TLX2O43763 284 aaPredicted RBP13.08□□□□□ -0.32
LITAF-217ENST00000575426 ALPLP05186 524 aa13.08□□□□□ -0.32
LITAF-217ENST00000575426 TUBG1P23258 451 aa13.08□□□□□ -0.32
LITAF-217ENST00000575426 EPHA2P29317 976 aa13.08□□□□□ -0.32
LITAF-217ENST00000575426 WNT5AP41221 380 aa13.08□□□□□ -0.32
LITAF-217ENST00000575426 RPS27P42677 84 aaKnown RBP13.08□□□□□ -0.32
LITAF-217ENST00000575426 RGS6P49758 472 aa13.08□□□□□ -0.32
LITAF-217ENST00000575426 PPOXP50336 477 aa13.08□□□□□ -0.32
LITAF-217ENST00000575426 KLF3P57682 345 aaPredicted RBP13.08□□□□□ -0.32
LITAF-217ENST00000575426 PPP1CBP62140 327 aa13.08□□□□□ -0.32
LITAF-217ENST00000575426 LINC01590Q5TEZ4 76 aa13.08□□□□□ -0.32
LITAF-217ENST00000575426 C12orf73Q69YU5 71 aa13.08□□□□□ -0.32
LITAF-217ENST00000575426 LYPD4Q6UWN0 246 aa13.08□□□□□ -0.32
LITAF-217ENST00000575426 CFAP77Q6ZQR2 320 aa13.08□□□□□ -0.32
LITAF-217ENST00000575426 DCXRQ7Z4W1 244 aa13.08□□□□□ -0.32
LITAF-217ENST00000575426 OR5L1Q8NGL2 311 aa13.08□□□□□ -0.32
LITAF-217ENST00000575426 SLC7A6Q92536 515 aa13.08□□□□□ -0.32
LITAF-217ENST00000575426 ZMYND19Q96E35 227 aaPredicted RBP13.08□□□□□ -0.32
LITAF-217ENST00000575426 DOK1Q99704 481 aa13.08□□□□□ -0.32
LITAF-217ENST00000575426 GABARAPL3Q9BY60 117 aa13.08□□□□□ -0.32
LITAF-217ENST00000575426 RAB1BQ9H0U4 201 aa13.08□□□□□ -0.32
LITAF-217ENST00000575426 MS4A5Q9H3V2 200 aa13.08□□□□□ -0.32
LITAF-217ENST00000575426 TUBG2Q9NRH3 451 aa13.08□□□□□ -0.32
LITAF-217ENST00000575426 TBCCD1Q9NVR7 557 aa13.08□□□□□ -0.32
LITAF-217ENST00000575426 SLCO1C1Q9NYB5 712 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms