RNA–Protein interactions for RNA: ENST00000574911.5

NCBP3-204, Transcript of nuclear cap binding subunit 3, humanhuman

TSL 1 (best)

Gene NCBP3, Length 2,701 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCBP3-204ENST00000574911 CHST11Q9NPF2 352 aa7.99□□□□□ -1.13
NCBP3-204ENST00000574911 SUSD2Q9UGT4 822 aa7.99□□□□□ -1.13
NCBP3-204ENST00000574911 IGLV3-12A0A075B6K2 115 aa7.99□□□□□ -1.13
NCBP3-204ENST00000574911 TMEM269A0A1B0GVZ9 245 aa7.99□□□□□ -1.13
NCBP3-204ENST00000574911 TMEM82A0PJX8 343 aa7.99□□□□□ -1.13
NCBP3-204ENST00000574911 B8ZZF3 427 aa7.99□□□□□ -1.13
NCBP3-204ENST00000574911 ETV2O00321 342 aaPredicted RBP7.99□□□□□ -1.13
NCBP3-204ENST00000574911 P2RY10O00398 339 aa7.99□□□□□ -1.13
NCBP3-204ENST00000574911 RP2O75695 350 aa7.99□□□□□ -1.13
NCBP3-204ENST00000574911 SCO1O75880 301 aa7.99□□□□□ -1.13
NCBP3-204ENST00000574911 OR4E1P0C645 316 aa7.99□□□□□ -1.13
NCBP3-204ENST00000574911 ACSM4P0C7M7 580 aa7.99□□□□□ -1.13
NCBP3-204ENST00000574911 UBCP0CG48 685 aaKnown RBP7.99□□□□□ -1.13
NCBP3-204ENST00000574911 FOSL2P15408 326 aa7.99□□□□□ -1.13
NCBP3-204ENST00000574911 HSF1Q00613 529 aa7.99□□□□□ -1.13
NCBP3-204ENST00000574911 NAXDQ8IW45 347 aa7.99□□□□□ -1.13
NCBP3-204ENST00000574911 JAGN1Q8N5M9 183 aa7.99□□□□□ -1.13
NCBP3-204ENST00000574911 NKAIN3Q8N8D7 197 aa7.99□□□□□ -1.13
NCBP3-204ENST00000574911 OR4D6Q8NGJ1 314 aa7.99□□□□□ -1.13
NCBP3-204ENST00000574911 STT3BQ8TCJ2 826 aa7.99□□□□□ -1.13
NCBP3-204ENST00000574911 EDAQ92838 391 aa7.99□□□□□ -1.13
NCBP3-204ENST00000574911 FOXRED1Q96CU9 486 aaPredicted RBP7.99□□□□□ -1.13
NCBP3-204ENST00000574911 DDIT4LQ96D03 193 aa7.99□□□□□ -1.13
NCBP3-204ENST00000574911 CCDC120Q96HB5 630 aa7.99□□□□□ -1.13
NCBP3-204ENST00000574911 GAL3ST1Q99999 423 aa7.99□□□□□ -1.13
NCBP3-204ENST00000574911 PHF7Q9BWX1 381 aaPredicted RBP7.99□□□□□ -1.13
NCBP3-204ENST00000574911 DUSP15Q9H1R2 295 aaPredicted RBP7.99□□□□□ -1.13
NCBP3-204ENST00000574911 TMEM138Q9NPI0 162 aa7.99□□□□□ -1.13
NCBP3-204ENST00000574911 FANCFQ9NPI8 374 aa7.99□□□□□ -1.13
NCBP3-204ENST00000574911 FAM206AQ9NX38 181 aa7.99□□□□□ -1.13
NCBP3-204ENST00000574911 RDH8Q9NYR8 311 aa7.99□□□□□ -1.13
NCBP3-204ENST00000574911 ZNF224Q9NZL3 707 aa7.99□□□□□ -1.13
NCBP3-204ENST00000574911 MED11Q9P086 117 aa7.99□□□□□ -1.13
NCBP3-204ENST00000574911 KLHL13Q9P2N7 655 aa7.99□□□□□ -1.13
NCBP3-204ENST00000574911 ADAMTS20P59510 1910 aa7.99□□□□□ -1.13
NCBP3-204ENST00000574911 FXYD6-FXYD2A0A087WZ82 144 aa7.98□□□□□ -1.13
NCBP3-204ENST00000574911 MFSD2BA6NFX1 497 aa7.98□□□□□ -1.13
NCBP3-204ENST00000574911 WIPF3A6NGB9 483 aa7.98□□□□□ -1.13
NCBP3-204ENST00000574911 M0QYG6 137 aa7.98□□□□□ -1.13
NCBP3-204ENST00000574911 ALOX12BO75342 701 aa7.98□□□□□ -1.13
NCBP3-204ENST00000574911 NMBP08949 121 aa7.98□□□□□ -1.13
NCBP3-204ENST00000574911 H2BFMP0C1H6 154 aa7.98□□□□□ -1.13
NCBP3-204ENST00000574911 MMP16P51512 607 aa7.98□□□□□ -1.13
NCBP3-204ENST00000574911 POU3F1Q03052 451 aaPredicted RBP7.98□□□□□ -1.13
NCBP3-204ENST00000574911 FOXF1Q12946 379 aa7.98□□□□□ -1.13
NCBP3-204ENST00000574911 NR0B2Q15466 257 aa7.98□□□□□ -1.13
NCBP3-204ENST00000574911 OR10K2Q6IF99 312 aa7.98□□□□□ -1.13
NCBP3-204ENST00000574911 RHBDD2Q6NTF9 364 aa7.98□□□□□ -1.13
NCBP3-204ENST00000574911 ARSKQ6UWY0 536 aa7.98□□□□□ -1.13
NCBP3-204ENST00000574911 C12orf45Q8N5I9 185 aaPredicted RBP7.98□□□□□ -1.13
NCBP3-204ENST00000574911 NUBPLQ8TB37 319 aa7.98□□□□□ -1.13
NCBP3-204ENST00000574911 SCARB1Q8WTV0 552 aa7.98□□□□□ -1.13
NCBP3-204ENST00000574911 C11orf40Q8WZ69 217 aa7.98□□□□□ -1.13
NCBP3-204ENST00000574911 AQP3Q92482 292 aa7.98□□□□□ -1.13
NCBP3-204ENST00000574911 MESP1Q9BRJ9 268 aa7.98□□□□□ -1.13
NCBP3-204ENST00000574911 NUDT22Q9BRQ3 303 aa7.98□□□□□ -1.13
NCBP3-204ENST00000574911 FXYD6Q9H0Q3 95 aa7.98□□□□□ -1.13
NCBP3-204ENST00000574911 MED29Q9NX70 200 aa7.98□□□□□ -1.13
NCBP3-204ENST00000574911 MYEF2Q9P2K5 600 aaKnown RBP7.98□□□□□ -1.13
NCBP3-204ENST00000574911 GDF2Q9UK05 429 aaPredicted RBP7.98□□□□□ -1.13
NCBP3-204ENST00000574911 KLK13Q9UKR3 277 aa7.98□□□□□ -1.13
NCBP3-204ENST00000574911 LOC105371267A0A1B0GV96 52 aa7.98□□□□□ -1.13
NCBP3-204ENST00000574911 LIPT2A6NK58 231 aa7.98□□□□□ -1.13
NCBP3-204ENST00000574911 TMEM200CA6NKL6 621 aa7.98□□□□□ -1.13
NCBP3-204ENST00000574911 RFPL4AA6NLU0 287 aa7.98□□□□□ -1.13
NCBP3-204ENST00000574911 RFPL4AL1F8VTS6 287 aa7.98□□□□□ -1.13
NCBP3-204ENST00000574911 AMY2AP04746 511 aa7.98□□□□□ -1.13
NCBP3-204ENST00000574911 NAGAP17050 411 aa7.98□□□□□ -1.13
NCBP3-204ENST00000574911 CAPZA1P52907 286 aa7.98□□□□□ -1.13
NCBP3-204ENST00000574911 GMFBP60983 142 aa7.98□□□□□ -1.13
NCBP3-204ENST00000574911 TLE3Q04726 772 aa7.98□□□□□ -1.13
NCBP3-204ENST00000574911 SMAD4Q13485 552 aaKnown RBP7.98□□□□□ -1.13
NCBP3-204ENST00000574911 UBXN2BQ14CS0 331 aa7.98□□□□□ -1.13
NCBP3-204ENST00000574911 HYAL4Q2M3T9 481 aa7.98□□□□□ -1.13
NCBP3-204ENST00000574911 LY6G6FQ5SQ64 297 aa7.98□□□□□ -1.13
NCBP3-204ENST00000574911 PHF19Q5T6S3 580 aa7.98□□□□□ -1.13
NCBP3-204ENST00000574911 ATPAF1Q5TC12 328 aaPredicted RBP7.98□□□□□ -1.13
NCBP3-204ENST00000574911 CORO6Q6QEF8 472 aa7.98□□□□□ -1.13
NCBP3-204ENST00000574911 ZNF813Q6ZN06 617 aa7.98□□□□□ -1.13
NCBP3-204ENST00000574911 RABEPKQ7Z6M1 372 aa7.98□□□□□ -1.13
NCBP3-204ENST00000574911 CXorf58Q96LI9 332 aa7.98□□□□□ -1.13
NCBP3-204ENST00000574911 ARL6Q9H0F7 186 aa7.98□□□□□ -1.13
NCBP3-204ENST00000574911 ALKBH4Q9NXW9 302 aa7.98□□□□□ -1.13
NCBP3-204ENST00000574911 RAB22AQ9UL26 194 aa7.98□□□□□ -1.13
NCBP3-204ENST00000574911 SRPK3Q9UPE1 567 aa7.98□□□□□ -1.13
NCBP3-204ENST00000574911 HRH3Q9Y5N1 445 aa7.98□□□□□ -1.13
NCBP3-204ENST00000574911 KCNMB2Q9Y691 235 aa7.98□□□□□ -1.13
NCBP3-204ENST00000574911 TRAV14DV4A0A0A6YYC5 116 aa7.97□□□□□ -1.13
NCBP3-204ENST00000574911 A0A1W2PNV4 684 aa7.97□□□□□ -1.13
NCBP3-204ENST00000574911 ZNF736B4DX44 427 aaPredicted RBP7.97□□□□□ -1.13
NCBP3-204ENST00000574911 EFNA2O43921 213 aa7.97□□□□□ -1.13
NCBP3-204ENST00000574911 CYB5AP00167 134 aa7.97□□□□□ -1.13
NCBP3-204ENST00000574911 HEXBP07686 556 aa7.97□□□□□ -1.13
NCBP3-204ENST00000574911 RPA2P15927 270 aa7.97□□□□□ -1.13
NCBP3-204ENST00000574911 HSD11B1P28845 292 aa7.97□□□□□ -1.13
NCBP3-204ENST00000574911 BDKRB2P30411 391 aa7.97□□□□□ -1.13
NCBP3-204ENST00000574911 GPR85P60893 370 aa7.97□□□□□ -1.13
NCBP3-204ENST00000574911 QRFPP83859 136 aa7.97□□□□□ -1.13
NCBP3-204ENST00000574911 SRSF4Q08170 494 aaKnown RBP7.97□□□□□ -1.13
NCBP3-204ENST00000574911 SQSTM1Q13501 440 aa7.97□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms