RNA–Protein interactions for RNA: ENST00000573852.5

SCARF1-206, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best)

Gene SCARF1, Length 2,698 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-206ENST00000573852 TMED7Q9Y3B3 224 aa17.09■□□□□ 0.33
SCARF1-206ENST00000573852 LOC101059948A0A1B0GTJ6 334 aa17.08■□□□□ 0.33
SCARF1-206ENST00000573852 OR14I1A6ND48 311 aa17.08■□□□□ 0.33
SCARF1-206ENST00000573852 NPIPB7O75200 414 aa17.08■□□□□ 0.33
SCARF1-206ENST00000573852 HLA-DOBP13765 273 aa17.08■□□□□ 0.33
SCARF1-206ENST00000573852 ARHGDIBP52566 201 aa17.08■□□□□ 0.33
SCARF1-206ENST00000573852 ATXN7L3Q14CW9 347 aaPredicted RBP17.08■□□□□ 0.33
SCARF1-206ENST00000573852 LIN54Q6MZP7 749 aa17.08■□□□□ 0.33
SCARF1-206ENST00000573852 G6PC2Q9NQR9 355 aa17.08■□□□□ 0.33
SCARF1-206ENST00000573852 CYP8B1Q9UNU6 501 aa17.08■□□□□ 0.33
SCARF1-206ENST00000573852 HRH3Q9Y5N1 445 aa17.08■□□□□ 0.33
SCARF1-206ENST00000573852 R4GMQ9 66 aa17.08■□□□□ 0.33
SCARF1-206ENST00000573852 LOC100509620A0A075B734 347 aa17.08■□□□□ 0.32
SCARF1-206ENST00000573852 KANTRA0A1W2PQU2 76 aa17.08■□□□□ 0.32
SCARF1-206ENST00000573852 RNF222A6NCQ9 220 aa17.08■□□□□ 0.32
SCARF1-206ENST00000573852 TMEM150CB9EJG8 249 aa17.08■□□□□ 0.32
SCARF1-206ENST00000573852 PLPP3O14495 311 aa17.08■□□□□ 0.32
SCARF1-206ENST00000573852 PGCP20142 388 aa17.08■□□□□ 0.32
SCARF1-206ENST00000573852 STARP49675 285 aa17.08■□□□□ 0.32
SCARF1-206ENST00000573852 C1orf140Q5VVS0 124 aa17.08■□□□□ 0.32
SCARF1-206ENST00000573852 KIAA0895LQ68EN5 471 aa17.08■□□□□ 0.32
SCARF1-206ENST00000573852 C3orf33Q6P1S2 294 aa17.08■□□□□ 0.32
SCARF1-206ENST00000573852 C9orf40Q8IXQ3 194 aa17.08■□□□□ 0.32
SCARF1-206ENST00000573852 MRGPRFQ96AM1 343 aa17.08■□□□□ 0.32
SCARF1-206ENST00000573852 GPR27Q9NS67 375 aa17.08■□□□□ 0.32
SCARF1-206ENST00000573852 TAS2R3Q9NYW6 316 aa17.08■□□□□ 0.32
SCARF1-206ENST00000573852 RHBDD3Q9Y3P4 386 aa17.08■□□□□ 0.32
SCARF1-206ENST00000573852 EYSQ5T1H1 3165 aa17.07■□□□□ 0.32
SCARF1-206ENST00000573852 ALG1L2C9J202 215 aa17.07■□□□□ 0.32
SCARF1-206ENST00000573852 TSPAN2O60636 221 aa17.07■□□□□ 0.32
SCARF1-206ENST00000573852 SLC25A4P12235 298 aa17.07■□□□□ 0.32
SCARF1-206ENST00000573852 ATP1B3P54709 279 aa17.07■□□□□ 0.32
SCARF1-206ENST00000573852 DLX2Q07687 328 aaPredicted RBP17.07■□□□□ 0.32
SCARF1-206ENST00000573852 ZNF345Q14585 488 aa17.07■□□□□ 0.32
SCARF1-206ENST00000573852 TTLL10Q6ZVT0 673 aa17.07■□□□□ 0.32
SCARF1-206ENST00000573852 LYPD6Q86Y78 171 aa17.07■□□□□ 0.32
SCARF1-206ENST00000573852 ZNF584Q8IVC4 421 aa17.07■□□□□ 0.32
SCARF1-206ENST00000573852 PPP1R1CQ8WVI7 109 aa17.07■□□□□ 0.32
SCARF1-206ENST00000573852 CMBLQ96DG6 245 aa17.07■□□□□ 0.32
SCARF1-206ENST00000573852 LRRC46Q96FV0 321 aa17.07■□□□□ 0.32
SCARF1-206ENST00000573852 TBL1XR1Q9BZK7 514 aa17.07■□□□□ 0.32
SCARF1-206ENST00000573852 DNTTIP1Q9H147 329 aa17.07■□□□□ 0.32
SCARF1-206ENST00000573852 FBXO9Q9UK97 447 aaPredicted RBP17.07■□□□□ 0.32
SCARF1-206ENST00000573852 MEGF11A6BM72 1044 aa17.07■□□□□ 0.32
SCARF1-206ENST00000573852 BCL2L11O43521 198 aa17.07■□□□□ 0.32
SCARF1-206ENST00000573852 OR2F2O95006 317 aa17.07■□□□□ 0.32
SCARF1-206ENST00000573852 ZBTB25P24278 435 aa17.07■□□□□ 0.32
SCARF1-206ENST00000573852 CXADRP78310 365 aa17.07■□□□□ 0.32
SCARF1-206ENST00000573852 GLO1Q04760 184 aa17.07■□□□□ 0.32
SCARF1-206ENST00000573852 OR2F1Q13607 317 aa17.07■□□□□ 0.32
SCARF1-206ENST00000573852 EBPQ15125 230 aaKnown RBP17.07■□□□□ 0.32
SCARF1-206ENST00000573852 ELOCQ15369 112 aa17.07■□□□□ 0.32
SCARF1-206ENST00000573852 C1orf100Q5SVJ3 147 aa17.07■□□□□ 0.32
SCARF1-206ENST00000573852 ZNF784Q8NCA9 323 aaPredicted RBP17.07■□□□□ 0.32
SCARF1-206ENST00000573852 BPIFCQ8NFQ6 507 aa17.07■□□□□ 0.32
SCARF1-206ENST00000573852 ZNF471Q9BX82 626 aaPredicted RBP17.07■□□□□ 0.32
SCARF1-206ENST00000573852 CST11Q9H112 138 aa17.07■□□□□ 0.32
SCARF1-206ENST00000573852 COMMD9Q9P000 198 aa17.07■□□□□ 0.32
SCARF1-206ENST00000573852 GDF2Q9UK05 429 aaPredicted RBP17.07■□□□□ 0.32
SCARF1-206ENST00000573852 OR52A1Q9UKL2 312 aa17.07■□□□□ 0.32
SCARF1-206ENST00000573852 A0A0A6YYH2 397 aa17.06■□□□□ 0.32
SCARF1-206ENST00000573852 A6NJ64 397 aa17.06■□□□□ 0.32
SCARF1-206ENST00000573852 IL11P20809 199 aa17.06■□□□□ 0.32
SCARF1-206ENST00000573852 ARRB1P49407 418 aaPredicted RBP17.06■□□□□ 0.32
SCARF1-206ENST00000573852 CAPZA1P52907 286 aa17.06■□□□□ 0.32
SCARF1-206ENST00000573852 DEFA5Q01523 94 aa17.06■□□□□ 0.32
SCARF1-206ENST00000573852 PPP1R1AQ13522 171 aa17.06■□□□□ 0.32
SCARF1-206ENST00000573852 CDNFQ49AH0 187 aa17.06■□□□□ 0.32
SCARF1-206ENST00000573852 SLC22A6Q4U2R8 563 aa17.06■□□□□ 0.32
SCARF1-206ENST00000573852 LPCAT3Q6P1A2 487 aa17.06■□□□□ 0.32
SCARF1-206ENST00000573852 OR2W3Q7Z3T1 314 aa17.06■□□□□ 0.32
SCARF1-206ENST00000573852 FJX1Q86VR8 437 aa17.06■□□□□ 0.32
SCARF1-206ENST00000573852 LINC00346Q8IVM7 164 aa17.06■□□□□ 0.32
SCARF1-206ENST00000573852 GVQW1Q8N7I0 195 aa17.06■□□□□ 0.32
SCARF1-206ENST00000573852 AQP3Q92482 292 aa17.06■□□□□ 0.32
SCARF1-206ENST00000573852 IFT46Q9NQC8 304 aa17.06■□□□□ 0.32
SCARF1-206ENST00000573852 ZNF107Q9UII5 783 aaPredicted RBP17.06■□□□□ 0.32
SCARF1-206ENST00000573852 PLEKHA6Q9Y2H5 1048 aa17.06■□□□□ 0.32
SCARF1-206ENST00000573852 IGKV3D-11A0A0A0MRZ8 115 aa17.06■□□□□ 0.32
SCARF1-206ENST00000573852 A0A1B0GW55 424 aa17.06■□□□□ 0.32
SCARF1-206ENST00000573852 LOC390937A0A1W2PQ73 354 aa17.06■□□□□ 0.32
SCARF1-206ENST00000573852 DUX4L2P0CJ85 424 aa17.06■□□□□ 0.32
SCARF1-206ENST00000573852 DUX4L3P0CJ86 424 aa17.06■□□□□ 0.32
SCARF1-206ENST00000573852 DUX4L4P0CJ87 422 aa17.06■□□□□ 0.32
SCARF1-206ENST00000573852 DUX4L5P0CJ88 424 aa17.06■□□□□ 0.32
SCARF1-206ENST00000573852 DUX4L6P0CJ89 424 aa17.06■□□□□ 0.32
SCARF1-206ENST00000573852 DUX4L7P0CJ90 424 aa17.06■□□□□ 0.32
SCARF1-206ENST00000573852 CNR1P21554 472 aa17.06■□□□□ 0.32
SCARF1-206ENST00000573852 POLR2HP52434 150 aaKnown RBP17.06■□□□□ 0.32
SCARF1-206ENST00000573852 DCXRQ7Z4W1 244 aa17.06■□□□□ 0.32
SCARF1-206ENST00000573852 SLC25A42Q86VD7 318 aa17.06■□□□□ 0.32
SCARF1-206ENST00000573852 WDFY1Q8IWB7 410 aa17.06■□□□□ 0.32
SCARF1-206ENST00000573852 CLEC1BQ9P126 229 aa17.06■□□□□ 0.32
SCARF1-206ENST00000573852 DUX4Q9UBX2 424 aa17.06■□□□□ 0.32
SCARF1-206ENST00000573852 FAM74A7A6NL05 159 aa17.05■□□□□ 0.32
SCARF1-206ENST00000573852 A8MVM7 634 aa17.05■□□□□ 0.32
SCARF1-206ENST00000573852 DISC1C4P0D8 188 aa17.05■□□□□ 0.32
SCARF1-206ENST00000573852 WDPCPO95876 746 aa17.05■□□□□ 0.32
SCARF1-206ENST00000573852 PLATP00750 562 aa17.05■□□□□ 0.32
SCARF1-206ENST00000573852 DLSTP36957 453 aa17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 68 ms