RNA–Protein interactions for RNA: ENST00000572083.5

CCDC40-206, Transcript of coiled-coil domain containing 40, humanhuman

TSL 2

Gene CCDC40, Length 816 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-206ENST00000572083 EBF4Q9BQW3 602 aa16.55■□□□□ 0.24
CCDC40-206ENST00000572083 CDADC1Q9BWV3 514 aa16.55■□□□□ 0.24
CCDC40-206ENST00000572083 EMC7Q9NPA0 242 aa16.55■□□□□ 0.24
CCDC40-206ENST00000572083 NOX4Q9NPH5 578 aa16.55■□□□□ 0.24
CCDC40-206ENST00000572083 SLC22A31A6NKX4 558 aa16.54■□□□□ 0.24
CCDC40-206ENST00000572083 C12orf71A8MTZ7 269 aa16.54■□□□□ 0.24
CCDC40-206ENST00000572083 ERLIN1O75477 346 aa16.54■□□□□ 0.24
CCDC40-206ENST00000572083 TNFRSF1BP20333 461 aa16.54■□□□□ 0.24
CCDC40-206ENST00000572083 RBM34P42696 430 aaKnown RBP16.54■□□□□ 0.24
CCDC40-206ENST00000572083 TAS2R41P59536 307 aa16.54■□□□□ 0.24
CCDC40-206ENST00000572083 PDCD1Q15116 288 aa16.54■□□□□ 0.24
CCDC40-206ENST00000572083 FAM201AQ5SY85 155 aa16.54■□□□□ 0.24
CCDC40-206ENST00000572083 PATL1Q86TB9 770 aaKnown RBP16.54■□□□□ 0.24
CCDC40-206ENST00000572083 IGFN1Q86VF2 1251 aa16.54■□□□□ 0.24
CCDC40-206ENST00000572083 TMEM86BQ8N661 226 aa16.54■□□□□ 0.24
CCDC40-206ENST00000572083 TMEM239Q8WW34 195 aa16.54■□□□□ 0.24
CCDC40-206ENST00000572083 SLC7A6Q92536 515 aa16.54■□□□□ 0.24
CCDC40-206ENST00000572083 HAVCR1Q96D42 359 aa16.54■□□□□ 0.24
CCDC40-206ENST00000572083 MEGF10Q96KG7 1140 aa16.54■□□□□ 0.24
CCDC40-206ENST00000572083 SLC30A2Q9BRI3 323 aa16.54■□□□□ 0.24
CCDC40-206ENST00000572083 PCGF1Q9BSM1 259 aa16.54■□□□□ 0.24
CCDC40-206ENST00000572083 CLN8Q9UBY8 286 aa16.54■□□□□ 0.24
CCDC40-206ENST00000572083 PIP5K1CO60331 668 aa16.53■□□□□ 0.24
CCDC40-206ENST00000572083 SHOX2O60902 331 aaPredicted RBP16.53■□□□□ 0.24
CCDC40-206ENST00000572083 SFTPBP07988 381 aa16.53■□□□□ 0.24
CCDC40-206ENST00000572083 CPT2P23786 658 aa16.53■□□□□ 0.24
CCDC40-206ENST00000572083 RPL27P61353 136 aaKnown RBP16.53■□□□□ 0.24
CCDC40-206ENST00000572083 HLXQ14774 488 aaPredicted RBP16.53■□□□□ 0.24
CCDC40-206ENST00000572083 ZNF404Q494X3 552 aa16.53■□□□□ 0.24
CCDC40-206ENST00000572083 TTMPQ5BVD1 217 aa16.53■□□□□ 0.24
CCDC40-206ENST00000572083 ZNF620Q6ZNG0 422 aa16.53■□□□□ 0.24
CCDC40-206ENST00000572083 NLRC3Q7RTR2 1065 aa16.53■□□□□ 0.24
CCDC40-206ENST00000572083 DHDDSQ86SQ9 333 aa16.53■□□□□ 0.24
CCDC40-206ENST00000572083 SLC30A8Q8IWU4 369 aa16.53■□□□□ 0.24
CCDC40-206ENST00000572083 LINC01006Q8NI28 216 aa16.53■□□□□ 0.24
CCDC40-206ENST00000572083 FAM110DQ8TAY7 271 aaPredicted RBP16.53■□□□□ 0.24
CCDC40-206ENST00000572083 LIPHQ8WWY8 451 aa16.53■□□□□ 0.24
CCDC40-206ENST00000572083 TCF7L1Q9HCS4 588 aa16.53■□□□□ 0.24
CCDC40-206ENST00000572083 POLE4Q9NR33 117 aa16.53■□□□□ 0.24
CCDC40-206ENST00000572083 ASH2LQ9UBL3 628 aa16.53■□□□□ 0.24
CCDC40-206ENST00000572083 POMT1Q9Y6A1 747 aa16.53■□□□□ 0.24
CCDC40-206ENST00000572083 DOCK11Q5JSL3 2073 aa16.53■□□□□ 0.24
CCDC40-206ENST00000572083 C22orf46C9J442 243 aa16.52■□□□□ 0.24
CCDC40-206ENST00000572083 H0YL77 283 aa16.52■□□□□ 0.24
CCDC40-206ENST00000572083 H7C1C5 153 aa16.52■□□□□ 0.24
CCDC40-206ENST00000572083 IFNL4K9M1U5 179 aa16.52■□□□□ 0.24
CCDC40-206ENST00000572083 COX5BP10606 129 aa16.52■□□□□ 0.24
CCDC40-206ENST00000572083 TUBG1P23258 451 aa16.52■□□□□ 0.24
CCDC40-206ENST00000572083 CRYBA2P53672 197 aa16.52■□□□□ 0.24
CCDC40-206ENST00000572083 LCN6P62502 163 aa16.52■□□□□ 0.24
CCDC40-206ENST00000572083 LYPD2Q6UXB3 125 aa16.52■□□□□ 0.24
CCDC40-206ENST00000572083 VASH1Q7L8A9 365 aaPredicted RBP16.52■□□□□ 0.24
CCDC40-206ENST00000572083 SYT9Q86SS6 491 aa16.52■□□□□ 0.24
CCDC40-206ENST00000572083 MOGAT3Q86VF5 341 aa16.52■□□□□ 0.24
CCDC40-206ENST00000572083 FAM71F1Q96KD3 344 aaPredicted RBP16.52■□□□□ 0.24
CCDC40-206ENST00000572083 TUBG2Q9NRH3 451 aa16.52■□□□□ 0.24
CCDC40-206ENST00000572083 NKIRAS1Q9NYS0 192 aa16.52■□□□□ 0.24
CCDC40-206ENST00000572083 HIF3AQ9Y2N7 669 aa16.52■□□□□ 0.24
CCDC40-206ENST00000572083 SH3GLB1Q9Y371 365 aa16.52■□□□□ 0.24
CCDC40-206ENST00000572083 NBEAL2Q6ZNJ1 2754 aa16.51■□□□□ 0.23
CCDC40-206ENST00000572083 SGCEO43556 437 aa16.51■□□□□ 0.23
CCDC40-206ENST00000572083 IGF2P01344 180 aa16.51■□□□□ 0.23
CCDC40-206ENST00000572083 IDH3AP50213 366 aa16.51■□□□□ 0.23
CCDC40-206ENST00000572083 BPIFB3P59826 476 aa16.51■□□□□ 0.23
CCDC40-206ENST00000572083 CTXN1P60606 82 aa16.51■□□□□ 0.23
CCDC40-206ENST00000572083 SCRN3Q0VDG4 424 aa16.51■□□□□ 0.23
CCDC40-206ENST00000572083 PIN1Q13526 163 aaPredicted RBP16.51■□□□□ 0.23
CCDC40-206ENST00000572083 WDR25Q64LD2 544 aaPredicted RBP16.51■□□□□ 0.23
CCDC40-206ENST00000572083 OR2T2Q6IF00 324 aa16.51■□□□□ 0.23
CCDC40-206ENST00000572083 FNDC8Q8TC99 324 aa16.51■□□□□ 0.23
CCDC40-206ENST00000572083 C10orf82Q8WW14 230 aa16.51■□□□□ 0.23
CCDC40-206ENST00000572083 SSMEM1Q8WWF3 244 aa16.51■□□□□ 0.23
CCDC40-206ENST00000572083 MAGEB18Q96M61 343 aa16.51■□□□□ 0.23
CCDC40-206ENST00000572083 CGREF1Q99674 301 aa16.51■□□□□ 0.23
CCDC40-206ENST00000572083 PTTG3PQ9NZH4 202 aa16.51■□□□□ 0.23
CCDC40-206ENST00000572083 RIMS3Q9UJD0 308 aa16.51■□□□□ 0.23
CCDC40-206ENST00000572083 MED31Q9Y3C7 131 aa16.51■□□□□ 0.23
CCDC40-206ENST00000572083 F5H5P2 479 aa16.5■□□□□ 0.23
CCDC40-206ENST00000572083 PHYHO14832 338 aa16.5■□□□□ 0.23
CCDC40-206ENST00000572083 ENSAO43768 121 aaKnown RBP16.5■□□□□ 0.23
CCDC40-206ENST00000572083 GPR137BO60478 399 aa16.5■□□□□ 0.23
CCDC40-206ENST00000572083 CLPXO76031 633 aa16.5■□□□□ 0.23
CCDC40-206ENST00000572083 OR5F1O95221 314 aa16.5■□□□□ 0.23
CCDC40-206ENST00000572083 RAC2P15153 192 aa16.5■□□□□ 0.23
CCDC40-206ENST00000572083 SRP9P49458 86 aaKnown RBP16.5■□□□□ 0.23
CCDC40-206ENST00000572083 PROK1P58294 105 aa16.5■□□□□ 0.23
CCDC40-206ENST00000572083 FBLN7Q53RD9 439 aa16.5■□□□□ 0.23
CCDC40-206ENST00000572083 OTPQ5XKR4 325 aa16.5■□□□□ 0.23
CCDC40-206ENST00000572083 MICU2Q8IYU8 434 aa16.5■□□□□ 0.23
CCDC40-206ENST00000572083 BHLHE23Q8NDY6 225 aa16.5■□□□□ 0.23
CCDC40-206ENST00000572083 C19orf18Q8NEA5 215 aa16.5■□□□□ 0.23
CCDC40-206ENST00000572083 OR8G5Q8NG78 346 aa16.5■□□□□ 0.23
CCDC40-206ENST00000572083 DYRK2Q92630 601 aa16.5■□□□□ 0.23
CCDC40-206ENST00000572083 PTP4A1Q93096 173 aa16.5■□□□□ 0.23
CCDC40-206ENST00000572083 KAT8Q9H7Z6 458 aaKnown RBP16.5■□□□□ 0.23
CCDC40-206ENST00000572083 LRRC30A6NM36 301 aa16.49■□□□□ 0.23
CCDC40-206ENST00000572083 TNFRSF13BO14836 293 aaPredicted RBP16.49■□□□□ 0.23
CCDC40-206ENST00000572083 MLNRO43193 412 aa16.49■□□□□ 0.23
CCDC40-206ENST00000572083 ALX3O95076 343 aa16.49■□□□□ 0.23
CCDC40-206ENST00000572083 IGHV4-59P01825 116 aa16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms