RNA–Protein interactions for RNA: ENST00000571554.5

RAB40B-204, Transcript of RAB40B, member RAS oncogene family, humanhuman

TSL 4

Gene RAB40B, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-204ENST00000571554 FAHD2AQ96GK7 314 aa11.67□□□□□ -0.54
RAB40B-204ENST00000571554 SAMD8Q96LT4 415 aa11.67□□□□□ -0.54
RAB40B-204ENST00000571554 C19orf24Q9BVV8 132 aa11.67□□□□□ -0.54
RAB40B-204ENST00000571554 OR52D1Q9H346 318 aa11.67□□□□□ -0.54
RAB40B-204ENST00000571554 FN3KQ9H479 309 aa11.67□□□□□ -0.54
RAB40B-204ENST00000571554 METTL17Q9H7H0 456 aaPredicted RBP11.67□□□□□ -0.54
RAB40B-204ENST00000571554 CD300AQ9UGN4 299 aa11.67□□□□□ -0.54
RAB40B-204ENST00000571554 ARL2BPQ9Y2Y0 163 aa11.67□□□□□ -0.54
RAB40B-204ENST00000571554 STARD10Q9Y365 291 aa11.67□□□□□ -0.54
RAB40B-204ENST00000571554 AHCYL1O43865 530 aa11.66□□□□□ -0.54
RAB40B-204ENST00000571554 ICMTO60725 284 aa11.66□□□□□ -0.54
RAB40B-204ENST00000571554 UBOX5O94941 541 aa11.66□□□□□ -0.54
RAB40B-204ENST00000571554 FABP3P05413 133 aa11.66□□□□□ -0.54
RAB40B-204ENST00000571554 COX5BP10606 129 aa11.66□□□□□ -0.54
RAB40B-204ENST00000571554 ITGA2P17301 1181 aa11.66□□□□□ -0.54
RAB40B-204ENST00000571554 GSTM3P21266 225 aa11.66□□□□□ -0.54
RAB40B-204ENST00000571554 TNFAIP6P98066 277 aaPredicted RBP11.66□□□□□ -0.54
RAB40B-204ENST00000571554 HLXQ14774 488 aaPredicted RBP11.66□□□□□ -0.54
RAB40B-204ENST00000571554 MTX3Q5HYI7 312 aa11.66□□□□□ -0.54
RAB40B-204ENST00000571554 FAM209AQ5JX71 171 aa11.66□□□□□ -0.54
RAB40B-204ENST00000571554 ARL9Q6T311 187 aa11.66□□□□□ -0.54
RAB40B-204ENST00000571554 CYP2R1Q6VVX0 501 aa11.66□□□□□ -0.54
RAB40B-204ENST00000571554 ADCK1Q86TW2 530 aa11.66□□□□□ -0.54
RAB40B-204ENST00000571554 JAZF1Q86VZ6 243 aa11.66□□□□□ -0.54
RAB40B-204ENST00000571554 OR5AS1Q8N127 324 aa11.66□□□□□ -0.54
RAB40B-204ENST00000571554 OR2Z1Q8NG97 314 aa11.66□□□□□ -0.54
RAB40B-204ENST00000571554 OR4K13Q8NH42 304 aa11.66□□□□□ -0.54
RAB40B-204ENST00000571554 MCUR1Q96AQ8 359 aa11.66□□□□□ -0.54
RAB40B-204ENST00000571554 CMBLQ96DG6 245 aa11.66□□□□□ -0.54
RAB40B-204ENST00000571554 DCLRE1CQ96SD1 692 aaKnown RBP11.66□□□□□ -0.54
RAB40B-204ENST00000571554 NMNAT3Q96T66 252 aa11.66□□□□□ -0.54
RAB40B-204ENST00000571554 GAL3ST1Q99999 423 aa11.66□□□□□ -0.54
RAB40B-204ENST00000571554 IFT27Q9BW83 186 aa11.66□□□□□ -0.54
RAB40B-204ENST00000571554 SRA1Q9HD15 236 aaKnown RBP11.66□□□□□ -0.54
RAB40B-204ENST00000571554 UBAP1Q9NZ09 502 aa11.66□□□□□ -0.54
RAB40B-204ENST00000571554 PTTG3PQ9NZH4 202 aa11.66□□□□□ -0.54
RAB40B-204ENST00000571554 ARHGAP32A7KAX9 2087 aa11.65□□□□□ -0.54
RAB40B-204ENST00000571554 DYSFO75923 2080 aa11.65□□□□□ -0.54
RAB40B-204ENST00000571554 OR6C6A6NF89 314 aa11.65□□□□□ -0.54
RAB40B-204ENST00000571554 TXNDC12O95881 172 aa11.65□□□□□ -0.54
RAB40B-204ENST00000571554 IGHV2-5P01817 119 aa11.65□□□□□ -0.54
RAB40B-204ENST00000571554 HIST1H1CP16403 213 aaKnown RBP11.65□□□□□ -0.54
RAB40B-204ENST00000571554 ATP6V1B2P21281 511 aa11.65□□□□□ -0.54
RAB40B-204ENST00000571554 SLC6A6P31641 620 aa11.65□□□□□ -0.54
RAB40B-204ENST00000571554 THBS2P35442 1172 aa11.65□□□□□ -0.54
RAB40B-204ENST00000571554 PRSS12P56730 875 aa11.65□□□□□ -0.54
RAB40B-204ENST00000571554 SMIM11AP58511 58 aa11.65□□□□□ -0.54
RAB40B-204ENST00000571554 RFX4Q33E94 735 aa11.65□□□□□ -0.54
RAB40B-204ENST00000571554 Q6ZR03 302 aa11.65□□□□□ -0.54
RAB40B-204ENST00000571554 PIGWQ7Z7B1 504 aa11.65□□□□□ -0.54
RAB40B-204ENST00000571554 LINC00346Q8IVM7 164 aa11.65□□□□□ -0.54
RAB40B-204ENST00000571554 ZDHHC21Q8IVQ6 265 aa11.65□□□□□ -0.54
RAB40B-204ENST00000571554 OR6V1Q8N148 313 aa11.65□□□□□ -0.54
RAB40B-204ENST00000571554 NPEPL1Q8NDH3 523 aa11.65□□□□□ -0.54
RAB40B-204ENST00000571554 SDR9C7Q8NEX9 313 aa11.65□□□□□ -0.54
RAB40B-204ENST00000571554 OR1F12Q8NHA8 337 aa11.65□□□□□ -0.54
RAB40B-204ENST00000571554 TIMD4Q96H15 378 aa11.65□□□□□ -0.54
RAB40B-204ENST00000571554 EGLN1Q9GZT9 426 aa11.65□□□□□ -0.54
RAB40B-204ENST00000571554 OCEL1Q9H607 264 aa11.65□□□□□ -0.54
RAB40B-204ENST00000571554 RPRD1BQ9NQG5 326 aaKnown RBP11.65□□□□□ -0.54
RAB40B-204ENST00000571554 CYSLTR2Q9NS75 346 aa11.65□□□□□ -0.54
RAB40B-204ENST00000571554 TBCCD1Q9NVR7 557 aa11.65□□□□□ -0.54
RAB40B-204ENST00000571554 KLHL21Q9UJP4 597 aa11.65□□□□□ -0.54
RAB40B-204ENST00000571554 PURGQ9UJV8 347 aaKnown RBP11.65□□□□□ -0.54
RAB40B-204ENST00000571554 LHFPL6Q9Y693 200 aa11.65□□□□□ -0.54
RAB40B-204ENST00000571554 FBN3Q75N90 2809 aa11.65□□□□□ -0.54
RAB40B-204ENST00000571554 LOC105371242A0A075B767 164 aa11.64□□□□□ -0.55
RAB40B-204ENST00000571554 IGLV1-36A0A0B4J1U3 117 aa11.64□□□□□ -0.55
RAB40B-204ENST00000571554 H3BSA7 217 aa11.64□□□□□ -0.55
RAB40B-204ENST00000571554 PLPP2O43688 288 aa11.64□□□□□ -0.55
RAB40B-204ENST00000571554 DEAF1O75398 565 aaPredicted RBP11.64□□□□□ -0.55
RAB40B-204ENST00000571554 AVPP01185 164 aa11.64□□□□□ -0.55
RAB40B-204ENST00000571554 PCMT1P22061 227 aa11.64□□□□□ -0.55
RAB40B-204ENST00000571554 FPR3P25089 353 aa11.64□□□□□ -0.55
RAB40B-204ENST00000571554 LSM6P62312 80 aaKnown RBP11.64□□□□□ -0.55
RAB40B-204ENST00000571554 PPP1R8Q12972 351 aaKnown RBP11.64□□□□□ -0.55
RAB40B-204ENST00000571554 CLEC12AQ5QGZ9 265 aa11.64□□□□□ -0.55
RAB40B-204ENST00000571554 SLC35F1Q5T1Q4 408 aa11.64□□□□□ -0.55
RAB40B-204ENST00000571554 ACSM5Q6NUN0 579 aa11.64□□□□□ -0.55
RAB40B-204ENST00000571554 SHQ1Q6PI26 577 aaKnown RBP11.64□□□□□ -0.55
RAB40B-204ENST00000571554 DNM1P34Q6PK57 102 aa11.64□□□□□ -0.55
RAB40B-204ENST00000571554 C16orf89Q6UX73 402 aa11.64□□□□□ -0.55
RAB40B-204ENST00000571554 OR9Q2Q8NGE9 314 aa11.64□□□□□ -0.55
RAB40B-204ENST00000571554 RAB1CQ92928 201 aa11.64□□□□□ -0.55
RAB40B-204ENST00000571554 RAB39BQ96DA2 213 aa11.64□□□□□ -0.55
RAB40B-204ENST00000571554 WACQ9BTA9 647 aa11.64□□□□□ -0.55
RAB40B-204ENST00000571554 EGLN3Q9H6Z9 239 aa11.64□□□□□ -0.55
RAB40B-204ENST00000571554 WDR76Q9H967 626 aa11.64□□□□□ -0.55
RAB40B-204ENST00000571554 ZDHHC8Q9ULC8 765 aa11.64□□□□□ -0.55
RAB40B-204ENST00000571554 TMCC3Q9ULS5 477 aa11.64□□□□□ -0.55
RAB40B-204ENST00000571554 B9D1Q9UPM9 204 aa11.64□□□□□ -0.55
RAB40B-204ENST00000571554 TRAV20A0A0B4J274 112 aa11.63□□□□□ -0.55
RAB40B-204ENST00000571554 IGHV3-64DA0A0J9YX35 117 aa11.63□□□□□ -0.55
RAB40B-204ENST00000571554 TCF21O43680 179 aa11.63□□□□□ -0.55
RAB40B-204ENST00000571554 DCTN3O75935 186 aa11.63□□□□□ -0.55
RAB40B-204ENST00000571554 PNPP00491 289 aa11.63□□□□□ -0.55
RAB40B-204ENST00000571554 RENP00797 406 aa11.63□□□□□ -0.55
RAB40B-204ENST00000571554 HLA-DQA2P01906 255 aa11.63□□□□□ -0.55
RAB40B-204ENST00000571554 ADH4P08319 380 aa11.63□□□□□ -0.55
RAB40B-204ENST00000571554 ADRA2CP18825 462 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms