RNA–Protein interactions for RNA: ENST00000570937.1

NUP88-202, Transcript of nucleoporin 88, humanhuman

TSL 3

Gene NUP88, Length 361 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-202ENST00000570937 GUSBP08236 651 aa3.31□□□□□ -1.88
NUP88-202ENST00000570937 TROVE2P10155 538 aaKnown RBP eCLIP3.31□□□□□ -1.88
NUP88-202ENST00000570937 IRF2P14316 349 aa3.31□□□□□ -1.88
NUP88-202ENST00000570937 UQCRBP14927 111 aa3.31□□□□□ -1.88
NUP88-202ENST00000570937 CPN1P15169 458 aa3.31□□□□□ -1.88
NUP88-202ENST00000570937 GATA1P15976 413 aaPredicted RBP3.31□□□□□ -1.88
NUP88-202ENST00000570937 PPIBP23284 216 aaKnown RBP3.31□□□□□ -1.88
NUP88-202ENST00000570937 ME2P23368 584 aa3.31□□□□□ -1.88
NUP88-202ENST00000570937 DPP4P27487 766 aa3.31□□□□□ -1.88
NUP88-202ENST00000570937 PTPN6P29350 595 aa3.31□□□□□ -1.88
NUP88-202ENST00000570937 SOAT1P35610 550 aa3.31□□□□□ -1.88
NUP88-202ENST00000570937 MAP3K8P41279 467 aa3.31□□□□□ -1.88
NUP88-202ENST00000570937 ZFP36L2P47974 494 aaKnown RBP3.31□□□□□ -1.88
NUP88-202ENST00000570937 TRPC1P48995 793 aa3.31□□□□□ -1.88
NUP88-202ENST00000570937 KHKP50053 298 aa3.31□□□□□ -1.88
NUP88-202ENST00000570937 ASCL1P50553 236 aa3.31□□□□□ -1.88
NUP88-202ENST00000570937 POLR2JP52435 117 aaKnown RBP3.31□□□□□ -1.88
NUP88-202ENST00000570937 AQP5P55064 265 aa3.31□□□□□ -1.88
NUP88-202ENST00000570937 NME5P56597 212 aa3.31□□□□□ -1.88
NUP88-202ENST00000570937 STX5Q13190 355 aa3.31□□□□□ -1.88
NUP88-202ENST00000570937 LASP1Q14847 261 aaKnown RBP3.31□□□□□ -1.88
NUP88-202ENST00000570937 ZNF74Q16587 644 aa3.31□□□□□ -1.88
NUP88-202ENST00000570937 DUSP5Q16690 384 aa3.31□□□□□ -1.88
NUP88-202ENST00000570937 ZSWIM7Q19AV6 140 aa3.31□□□□□ -1.88
NUP88-202ENST00000570937 ZNF630Q2M218 657 aaPredicted RBP3.31□□□□□ -1.88
NUP88-202ENST00000570937 VWC2Q2TAL6 325 aa3.31□□□□□ -1.88
NUP88-202ENST00000570937 TTMPQ5BVD1 217 aa3.31□□□□□ -1.88
NUP88-202ENST00000570937 SPANXN4Q5MJ08 99 aa3.31□□□□□ -1.88
NUP88-202ENST00000570937 DCST2Q5T1A1 773 aa3.31□□□□□ -1.88
NUP88-202ENST00000570937 C1orf185Q5T7R7 199 aa3.31□□□□□ -1.88
NUP88-202ENST00000570937 RAET1LQ5VY80 246 aa3.31□□□□□ -1.88
NUP88-202ENST00000570937 FAM219BQ5XKK7 198 aa3.31□□□□□ -1.88
NUP88-202ENST00000570937 OR5M10Q6IEU7 315 aa3.31□□□□□ -1.88
NUP88-202ENST00000570937 OR2A2Q6IF42 318 aa3.31□□□□□ -1.88
NUP88-202ENST00000570937 NPSR1Q6W5P4 371 aa3.31□□□□□ -1.88
NUP88-202ENST00000570937 EIF3MQ7L2H7 374 aaKnown RBP3.31□□□□□ -1.88
NUP88-202ENST00000570937 YRDCQ86U90 279 aaKnown RBP3.31□□□□□ -1.88
NUP88-202ENST00000570937 MARCH3Q86UD3 253 aa3.31□□□□□ -1.88
NUP88-202ENST00000570937 OR5M9Q8NGP3 310 aa3.31□□□□□ -1.88
NUP88-202ENST00000570937 OR6S1Q8NH40 331 aa3.31□□□□□ -1.88
NUP88-202ENST00000570937 FAM110BQ8TC76 370 aa3.31□□□□□ -1.88
NUP88-202ENST00000570937 ZPLD1Q8TCW7 415 aa3.31□□□□□ -1.88
NUP88-202ENST00000570937 MIPOL1Q8TD10 442 aa3.31□□□□□ -1.88
NUP88-202ENST00000570937 CKAP2Q8WWK9 683 aa3.31□□□□□ -1.88
NUP88-202ENST00000570937 CDS1Q92903 461 aa3.31□□□□□ -1.88
NUP88-202ENST00000570937 NEURL3Q96EH8 262 aa3.31□□□□□ -1.88
NUP88-202ENST00000570937 THOC1Q96FV9 657 aaKnown RBP3.31□□□□□ -1.88
NUP88-202ENST00000570937 C4orf45Q96LM5 186 aa3.31□□□□□ -1.88
NUP88-202ENST00000570937 ZFP3Q96NJ6 502 aa3.31□□□□□ -1.88
NUP88-202ENST00000570937 TRNT1Q96Q11 434 aaKnown RBP3.31□□□□□ -1.88
NUP88-202ENST00000570937 OR7D2Q96RA2 312 aa3.31□□□□□ -1.88
NUP88-202ENST00000570937 ZNF300Q96RE9 604 aaPredicted RBP3.31□□□□□ -1.88
NUP88-202ENST00000570937 MYCBPQ99417 103 aaPredicted RBP3.31□□□□□ -1.88
NUP88-202ENST00000570937 NKX3-1Q99801 234 aaPredicted RBP3.31□□□□□ -1.88
NUP88-202ENST00000570937 SLC35A5Q9BS91 424 aa3.31□□□□□ -1.88
NUP88-202ENST00000570937 TTYH2Q9BSA4 534 aa3.31□□□□□ -1.88
NUP88-202ENST00000570937 DGCR6LQ9BY27 220 aa3.31□□□□□ -1.88
NUP88-202ENST00000570937 NMUR2Q9GZQ4 415 aa3.31□□□□□ -1.88
NUP88-202ENST00000570937 UBQLN3Q9H347 655 aa3.31□□□□□ -1.88
NUP88-202ENST00000570937 DSN1Q9H410 356 aa3.31□□□□□ -1.88
NUP88-202ENST00000570937 MTHFD2LQ9H903 347 aaPredicted RBP3.31□□□□□ -1.88
NUP88-202ENST00000570937 CALHM2Q9HA72 323 aa3.31□□□□□ -1.88
NUP88-202ENST00000570937 TIGARQ9NQ88 270 aa3.31□□□□□ -1.88
NUP88-202ENST00000570937 POLE3Q9NRF9 147 aa3.31□□□□□ -1.88
NUP88-202ENST00000570937 PNPLA3Q9NST1 481 aa3.31□□□□□ -1.88
NUP88-202ENST00000570937 ZNF629Q9UEG4 869 aaPredicted RBP3.31□□□□□ -1.88
NUP88-202ENST00000570937 WDR83OSQ9Y284 106 aa3.31□□□□□ -1.88
NUP88-202ENST00000570937 AP4B1Q9Y6B7 739 aa3.31□□□□□ -1.88
NUP88-202ENST00000570937 MYO18BQ8IUG5 2567 aa3.31□□□□□ -1.88
NUP88-202ENST00000570937 ESPL1Q14674 2120 aa3.31□□□□□ -1.88
NUP88-202ENST00000570937 UQCRHLA0A096LP55 91 aa3.3□□□□□ -1.88
NUP88-202ENST00000570937 IGLV3-32A0A0A0MS00 114 aa3.3□□□□□ -1.88
NUP88-202ENST00000570937 A0A0G2JND7 137 aa3.3□□□□□ -1.88
NUP88-202ENST00000570937 A0A1W2PR80 420 aa3.3□□□□□ -1.88
NUP88-202ENST00000570937 SERINC4A6NH21 518 aa3.3□□□□□ -1.88
NUP88-202ENST00000570937 EVPLLA8MZ36 301 aa3.3□□□□□ -1.88
NUP88-202ENST00000570937 EPM2AB3EWF7 344 aa3.3□□□□□ -1.88
NUP88-202ENST00000570937 C5orf58C9J3I9 102 aa3.3□□□□□ -1.88
NUP88-202ENST00000570937 SOCS3O14543 225 aa3.3□□□□□ -1.88
NUP88-202ENST00000570937 ANGPT2O15123 496 aa3.3□□□□□ -1.88
NUP88-202ENST00000570937 ZNF264O43296 627 aa3.3□□□□□ -1.88
NUP88-202ENST00000570937 EIF4E2O60573 245 aaKnown RBP3.3□□□□□ -1.88
NUP88-202ENST00000570937 EDF1O60869 148 aaKnown RBP3.3□□□□□ -1.88
NUP88-202ENST00000570937 NME6O75414 186 aaPredicted RBP3.3□□□□□ -1.88
NUP88-202ENST00000570937 SERPINB7O75635 380 aa3.3□□□□□ -1.88
NUP88-202ENST00000570937 SYNGR4O95473 234 aa3.3□□□□□ -1.88
NUP88-202ENST00000570937 OXSR1O95747 527 aaPredicted RBP3.3□□□□□ -1.88
NUP88-202ENST00000570937 EPPINO95925 133 aa3.3□□□□□ -1.88
NUP88-202ENST00000570937 VIMP08670 466 aaKnown RBP3.3□□□□□ -1.88
NUP88-202ENST00000570937 PABPC4LP0CB38 370 aaKnown RBP3.3□□□□□ -1.88
NUP88-202ENST00000570937 ZCCHC18P0CG32 403 aa3.3□□□□□ -1.88
NUP88-202ENST00000570937 SAGP10523 405 aaPredicted RBP3.3□□□□□ -1.88
NUP88-202ENST00000570937 ZNF17P17021 662 aa3.3□□□□□ -1.88
NUP88-202ENST00000570937 NCF2P19878 526 aaPredicted RBP3.3□□□□□ -1.88
NUP88-202ENST00000570937 FKBP2P26885 142 aaKnown RBP3.3□□□□□ -1.88
NUP88-202ENST00000570937 ELK4P28324 431 aa3.3□□□□□ -1.88
NUP88-202ENST00000570937 HTR1EP28566 365 aa3.3□□□□□ -1.88
NUP88-202ENST00000570937 OPRM1P35372 400 aa3.3□□□□□ -1.88
NUP88-202ENST00000570937 PTGDSP41222 190 aa3.3□□□□□ -1.88
NUP88-202ENST00000570937 CRATP43155 626 aa3.3□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms