RNA–Protein interactions for RNA: ENST00000570385.1

CTDNEP1-203, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 2

Gene CTDNEP1, Length 529 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-203ENST00000570385 FGFR1OP2Q9NVK5 253 aa7.24□□□□□ -1.25
CTDNEP1-203ENST00000570385 TBCCD1Q9NVR7 557 aa7.24□□□□□ -1.25
CTDNEP1-203ENST00000570385 CMTM6Q9NX76 183 aa7.24□□□□□ -1.25
CTDNEP1-203ENST00000570385 PLEK2Q9NYT0 353 aa7.24□□□□□ -1.25
CTDNEP1-203ENST00000570385 PTTG3PQ9NZH4 202 aa7.24□□□□□ -1.25
CTDNEP1-203ENST00000570385 ARMCX1Q9P291 453 aa7.24□□□□□ -1.25
CTDNEP1-203ENST00000570385 ASH2LQ9UBL3 628 aa7.24□□□□□ -1.25
CTDNEP1-203ENST00000570385 CGGBP1Q9UFW8 167 aaPredicted RBP7.24□□□□□ -1.25
CTDNEP1-203ENST00000570385 IL20RAQ9UHF4 553 aa7.24□□□□□ -1.25
CTDNEP1-203ENST00000570385 PPP1R3CQ9UQK1 317 aa7.24□□□□□ -1.25
CTDNEP1-203ENST00000570385 INSIG2Q9Y5U4 225 aa7.24□□□□□ -1.25
CTDNEP1-203ENST00000570385 TEX13CA0A0J9YWL9 993 aa7.23□□□□□ -1.25
CTDNEP1-203ENST00000570385 MDFIC2A0A1B0GVS7 189 aa7.23□□□□□ -1.25
CTDNEP1-203ENST00000570385 PRSS37A4D1T9 235 aa7.23□□□□□ -1.25
CTDNEP1-203ENST00000570385 CEACAM18A8MTB9 384 aa7.23□□□□□ -1.25
CTDNEP1-203ENST00000570385 H0YL77 283 aa7.23□□□□□ -1.25
CTDNEP1-203ENST00000570385 H3BSA7 217 aa7.23□□□□□ -1.25
CTDNEP1-203ENST00000570385 RER1O15258 196 aa7.23□□□□□ -1.25
CTDNEP1-203ENST00000570385 SLC16A7O60669 478 aa7.23□□□□□ -1.25
CTDNEP1-203ENST00000570385 ICMTO60725 284 aa7.23□□□□□ -1.25
CTDNEP1-203ENST00000570385 CD14P08571 375 aa7.23□□□□□ -1.25
CTDNEP1-203ENST00000570385 HKR1P10072 659 aa7.23□□□□□ -1.25
CTDNEP1-203ENST00000570385 SELEP16581 610 aa7.23□□□□□ -1.25
CTDNEP1-203ENST00000570385 ZNF12P17014 697 aa7.23□□□□□ -1.25
CTDNEP1-203ENST00000570385 TNFRSF1AP19438 455 aa7.23□□□□□ -1.25
CTDNEP1-203ENST00000570385 CD80P33681 288 aa7.23□□□□□ -1.25
CTDNEP1-203ENST00000570385 CENPAP49450 140 aa7.23□□□□□ -1.25
CTDNEP1-203ENST00000570385 MMP16P51512 607 aa7.23□□□□□ -1.25
CTDNEP1-203ENST00000570385 LIPEQ05469 1076 aa7.23□□□□□ -1.25
CTDNEP1-203ENST00000570385 FOXL1Q12952 345 aa7.23□□□□□ -1.25
CTDNEP1-203ENST00000570385 ZBED5Q49AG3 693 aa7.23□□□□□ -1.25
CTDNEP1-203ENST00000570385 ESCO2Q56NI9 601 aa7.23□□□□□ -1.25
CTDNEP1-203ENST00000570385 COQ5Q5HYK3 327 aa7.23□□□□□ -1.25
CTDNEP1-203ENST00000570385 CGB2Q6NT52 195 aa7.23□□□□□ -1.25
CTDNEP1-203ENST00000570385 FKBP9P1Q75LS8 142 aa7.23□□□□□ -1.25
CTDNEP1-203ENST00000570385 DOK3Q7L591 496 aa7.23□□□□□ -1.25
CTDNEP1-203ENST00000570385 HDXQ7Z353 690 aa7.23□□□□□ -1.25
CTDNEP1-203ENST00000570385 C1orf174Q8IYL3 243 aa7.23□□□□□ -1.25
CTDNEP1-203ENST00000570385 PCYOX1LQ8NBM8 494 aa7.23□□□□□ -1.25
CTDNEP1-203ENST00000570385 NPEPL1Q8NDH3 523 aa7.23□□□□□ -1.25
CTDNEP1-203ENST00000570385 BHLHE23Q8NDY6 225 aa7.23□□□□□ -1.25
CTDNEP1-203ENST00000570385 FNDC8Q8TC99 324 aa7.23□□□□□ -1.25
CTDNEP1-203ENST00000570385 LZICQ8WZA0 190 aa7.23□□□□□ -1.25
CTDNEP1-203ENST00000570385 POP5Q969H6 163 aaKnown RBP7.23□□□□□ -1.25
CTDNEP1-203ENST00000570385 HAVCR1Q96D42 359 aa7.23□□□□□ -1.25
CTDNEP1-203ENST00000570385 FAM46AQ96IP4 442 aaKnown RBP7.23□□□□□ -1.25
CTDNEP1-203ENST00000570385 SAMD8Q96LT4 415 aa7.23□□□□□ -1.25
CTDNEP1-203ENST00000570385 ZNF570Q96NI8 536 aa7.23□□□□□ -1.25
CTDNEP1-203ENST00000570385 MRI1Q9BV20 369 aa7.23□□□□□ -1.25
CTDNEP1-203ENST00000570385 ZNF747Q9BV97 191 aa7.23□□□□□ -1.25
CTDNEP1-203ENST00000570385 MS4A7Q9GZW8 240 aaPredicted RBP7.23□□□□□ -1.25
CTDNEP1-203ENST00000570385 SYT4Q9H2B2 425 aa7.23□□□□□ -1.25
CTDNEP1-203ENST00000570385 GCM1Q9NP62 436 aa7.23□□□□□ -1.25
CTDNEP1-203ENST00000570385 TNFRSF19Q9NS68 423 aa7.23□□□□□ -1.25
CTDNEP1-203ENST00000570385 GID8Q9NWU2 228 aa7.23□□□□□ -1.25
CTDNEP1-203ENST00000570385 OR5V1Q9UGF6 321 aa7.23□□□□□ -1.25
CTDNEP1-203ENST00000570385 COA3Q9Y2R0 106 aaPredicted RBP7.23□□□□□ -1.25
CTDNEP1-203ENST00000570385 PPIAL4EA0A075B759 164 aa7.22□□□□□ -1.25
CTDNEP1-203ENST00000570385 PPIAL4CA0A0B4J2A2 164 aa7.22□□□□□ -1.25
CTDNEP1-203ENST00000570385 BBIP1A8MTZ0 92 aa7.22□□□□□ -1.25
CTDNEP1-203ENST00000570385 PPIAL4DF5H284 164 aa7.22□□□□□ -1.25
CTDNEP1-203ENST00000570385 F5H5P2 479 aa7.22□□□□□ -1.25
CTDNEP1-203ENST00000570385 TMEM178BH3BS89 294 aa7.22□□□□□ -1.25
CTDNEP1-203ENST00000570385 CXCR6O00574 342 aa7.22□□□□□ -1.25
CTDNEP1-203ENST00000570385 SOCS2O14508 198 aa7.22□□□□□ -1.25
CTDNEP1-203ENST00000570385 GSTA4O15217 222 aa7.22□□□□□ -1.25
CTDNEP1-203ENST00000570385 SERPINA1P01009 418 aa7.22□□□□□ -1.25
CTDNEP1-203ENST00000570385 NPPAP01160 153 aa7.22□□□□□ -1.25
CTDNEP1-203ENST00000570385 WNT2P09544 360 aa7.22□□□□□ -1.25
CTDNEP1-203ENST00000570385 PPIAL4FP0DN26 164 aa7.22□□□□□ -1.25
CTDNEP1-203ENST00000570385 TROVE2P10155 538 aaKnown RBP eCLIP7.22□□□□□ -1.25
CTDNEP1-203ENST00000570385 COX5BP10606 129 aa7.22□□□□□ -1.25
CTDNEP1-203ENST00000570385 RPS2P15880 293 aaKnown RBP7.22□□□□□ -1.25
CTDNEP1-203ENST00000570385 NCK1P16333 377 aa7.22□□□□□ -1.25
CTDNEP1-203ENST00000570385 KITLGP21583 273 aa7.22□□□□□ -1.25
CTDNEP1-203ENST00000570385 OMGP23515 440 aa7.22□□□□□ -1.25
CTDNEP1-203ENST00000570385 MDH2P40926 338 aaKnown RBP7.22□□□□□ -1.25
CTDNEP1-203ENST00000570385 HOXA4Q00056 320 aaPredicted RBP7.22□□□□□ -1.25
CTDNEP1-203ENST00000570385 GUCY1A3Q02108 690 aa7.22□□□□□ -1.25
CTDNEP1-203ENST00000570385 KRR1Q13601 381 aaKnown RBP7.22□□□□□ -1.25
CTDNEP1-203ENST00000570385 MAPRE2Q15555 327 aa7.22□□□□□ -1.25
CTDNEP1-203ENST00000570385 MEP1BQ16820 701 aa7.22□□□□□ -1.25
CTDNEP1-203ENST00000570385 TMEM155Q4W5P6 130 aa7.22□□□□□ -1.25
CTDNEP1-203ENST00000570385 IFI44LQ53G44 452 aa7.22□□□□□ -1.25
CTDNEP1-203ENST00000570385 CCDC92Q53HC0 331 aaPredicted RBP7.22□□□□□ -1.25
CTDNEP1-203ENST00000570385 FGD3Q5JSP0 725 aa7.22□□□□□ -1.25
CTDNEP1-203ENST00000570385 CORO6Q6QEF8 472 aa7.22□□□□□ -1.25
CTDNEP1-203ENST00000570385 SHISA2Q6UWI4 295 aa7.22□□□□□ -1.25
CTDNEP1-203ENST00000570385 MBOAT2Q6ZWT7 520 aa7.22□□□□□ -1.25
CTDNEP1-203ENST00000570385 RRM2BQ7LG56 351 aa7.22□□□□□ -1.25
CTDNEP1-203ENST00000570385 FAM122BQ7Z309 247 aa7.22□□□□□ -1.25
CTDNEP1-203ENST00000570385 SYT9Q86SS6 491 aa7.22□□□□□ -1.25
CTDNEP1-203ENST00000570385 SLC15A3Q8IY34 581 aa7.22□□□□□ -1.25
CTDNEP1-203ENST00000570385 C19orf18Q8NEA5 215 aa7.22□□□□□ -1.25
CTDNEP1-203ENST00000570385 OR52E2Q8NGJ4 325 aa7.22□□□□□ -1.25
CTDNEP1-203ENST00000570385 OR1F12Q8NHA8 337 aa7.22□□□□□ -1.25
CTDNEP1-203ENST00000570385 ACOT11Q8WXI4 607 aaPredicted RBP7.22□□□□□ -1.25
CTDNEP1-203ENST00000570385 PTP4A1Q93096 173 aa7.22□□□□□ -1.25
CTDNEP1-203ENST00000570385 HSH2DQ96JZ2 352 aa7.22□□□□□ -1.25
CTDNEP1-203ENST00000570385 TSSK2Q96PF2 358 aa7.22□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms