RNA–Protein interactions for RNA: ENST00000569924.1

CNOT1-221, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 2

Gene CNOT1, Length 493 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-221ENST00000569924 HAT1O14929 419 aa2.68□□□□□ -1.98
CNOT1-221ENST00000569924 PFDN6O15212 129 aa2.68□□□□□ -1.98
CNOT1-221ENST00000569924 SURF4O15260 269 aa2.68□□□□□ -1.98
CNOT1-221ENST00000569924 TM9SF1O15321 606 aa2.68□□□□□ -1.98
CNOT1-221ENST00000569924 TAPBPO15533 448 aa2.68□□□□□ -1.98
CNOT1-221ENST00000569924 PSIP1O75475 530 aaKnown RBP2.68□□□□□ -1.98
CNOT1-221ENST00000569924 KHDRBS3O75525 346 aaKnown RBP2.68□□□□□ -1.98
CNOT1-221ENST00000569924 LRATO95237 230 aa2.68□□□□□ -1.98
CNOT1-221ENST00000569924 NSA2O95478 260 aaKnown RBP2.68□□□□□ -1.98
CNOT1-221ENST00000569924 TOMM40O96008 361 aa2.68□□□□□ -1.98
CNOT1-221ENST00000569924 NGFP01138 241 aa2.68□□□□□ -1.98
CNOT1-221ENST00000569924 CATP04040 527 aaKnown RBP2.68□□□□□ -1.98
CNOT1-221ENST00000569924 CRYGCP07315 174 aa2.68□□□□□ -1.98
CNOT1-221ENST00000569924 SP1P08047 785 aa2.68□□□□□ -1.98
CNOT1-221ENST00000569924 UBTFL6P0CB48 400 aaPredicted RBP2.68□□□□□ -1.98
CNOT1-221ENST00000569924 CD99P14209 185 aa2.68□□□□□ -1.98
CNOT1-221ENST00000569924 ABOP16442 354 aa2.68□□□□□ -1.98
CNOT1-221ENST00000569924 ZNF24P17028 368 aa2.68□□□□□ -1.98
CNOT1-221ENST00000569924 PRKACAP17612 351 aa2.68□□□□□ -1.98
CNOT1-221ENST00000569924 EDNRAP25101 427 aa2.68□□□□□ -1.98
CNOT1-221ENST00000569924 CHRNB4P30926 498 aa2.68□□□□□ -1.98
CNOT1-221ENST00000569924 OTX1P32242 354 aaPredicted RBP2.68□□□□□ -1.98
CNOT1-221ENST00000569924 GPR183P32249 361 aa2.68□□□□□ -1.98
CNOT1-221ENST00000569924 RPA3P35244 121 aaPredicted RBP2.68□□□□□ -1.98
CNOT1-221ENST00000569924 SAA4P35542 130 aa2.68□□□□□ -1.98
CNOT1-221ENST00000569924 NUP62P37198 522 aaPredicted RBP2.68□□□□□ -1.98
CNOT1-221ENST00000569924 ID1P41134 155 aa2.68□□□□□ -1.98
CNOT1-221ENST00000569924 XCR1P46094 333 aa2.68□□□□□ -1.98
CNOT1-221ENST00000569924 EMDP50402 254 aa2.68□□□□□ -1.98
CNOT1-221ENST00000569924 ART1P52961 327 aa2.68□□□□□ -1.98
CNOT1-221ENST00000569924 XGP55808 180 aa2.68□□□□□ -1.98
CNOT1-221ENST00000569924 TFF3Q07654 80 aa2.68□□□□□ -1.98
CNOT1-221ENST00000569924 CRMP1Q14194 572 aa2.68□□□□□ -1.98
CNOT1-221ENST00000569924 FASTKQ14296 549 aaKnown RBP2.68□□□□□ -1.98
CNOT1-221ENST00000569924 SPA17Q15506 151 aa2.68□□□□□ -1.98
CNOT1-221ENST00000569924 UBE2V2Q15819 145 aa2.68□□□□□ -1.98
CNOT1-221ENST00000569924 ALKBH6Q3KRA9 238 aa2.68□□□□□ -1.98
CNOT1-221ENST00000569924 SPINK14Q6IE38 97 aa2.68□□□□□ -1.98
CNOT1-221ENST00000569924 SLC25A25Q6KCM7 469 aa2.68□□□□□ -1.98
CNOT1-221ENST00000569924 NIPAL1Q6NVV3 410 aa2.68□□□□□ -1.98
CNOT1-221ENST00000569924 NEPROQ6NW34 567 aa2.68□□□□□ -1.98
CNOT1-221ENST00000569924 CREB3L2Q70SY1 520 aa2.68□□□□□ -1.98
CNOT1-221ENST00000569924 CYS1Q717R9 158 aa2.68□□□□□ -1.98
CNOT1-221ENST00000569924 EIF3MQ7L2H7 374 aaKnown RBP2.68□□□□□ -1.98
CNOT1-221ENST00000569924 H2BFWTQ7Z2G1 175 aa2.68□□□□□ -1.98
CNOT1-221ENST00000569924 VN1R4Q7Z5H5 301 aa2.68□□□□□ -1.98
CNOT1-221ENST00000569924 RPS19BP1Q86WX3 136 aaKnown RBP2.68□□□□□ -1.98
CNOT1-221ENST00000569924 TGIF2LYQ8IUE0 185 aa2.68□□□□□ -1.98
CNOT1-221ENST00000569924 CRLF3Q8IUI8 442 aa2.68□□□□□ -1.98
CNOT1-221ENST00000569924 KRT222Q8N1A0 295 aa2.68□□□□□ -1.98
CNOT1-221ENST00000569924 CLEC4FQ8N1N0 589 aa2.68□□□□□ -1.98
CNOT1-221ENST00000569924 Q8N1X5 172 aa2.68□□□□□ -1.98
CNOT1-221ENST00000569924 UBL4BQ8N7F7 174 aa2.68□□□□□ -1.98
CNOT1-221ENST00000569924 PLPP5Q8NEB5 264 aa2.68□□□□□ -1.98
CNOT1-221ENST00000569924 OR1K1Q8NGR3 316 aa2.68□□□□□ -1.98
CNOT1-221ENST00000569924 OR9A4Q8NGU2 314 aa2.68□□□□□ -1.98
CNOT1-221ENST00000569924 LILRB4Q8NHJ6 448 aa2.68□□□□□ -1.98
CNOT1-221ENST00000569924 FAM57AQ8TBR7 257 aa2.68□□□□□ -1.98
CNOT1-221ENST00000569924 MCOLN3Q8TDD5 553 aa2.68□□□□□ -1.98
CNOT1-221ENST00000569924 CA5BP1Q8WTZ4 195 aa2.68□□□□□ -1.98
CNOT1-221ENST00000569924 SKA2Q8WVK7 121 aaPredicted RBP2.68□□□□□ -1.98
CNOT1-221ENST00000569924 SLCO2A1Q92959 643 aa2.68□□□□□ -1.98
CNOT1-221ENST00000569924 RPL36ALQ969Q0 106 aaKnown RBP2.68□□□□□ -1.98
CNOT1-221ENST00000569924 ZNF778Q96MU6 729 aa2.68□□□□□ -1.98
CNOT1-221ENST00000569924 FAM218AQ96MZ4 157 aa2.68□□□□□ -1.98
CNOT1-221ENST00000569924 BIRC8Q96P09 236 aa2.68□□□□□ -1.98
CNOT1-221ENST00000569924 SIGLEC12Q96PQ1 595 aa2.68□□□□□ -1.98
CNOT1-221ENST00000569924 PANX2Q96RD6 677 aa2.68□□□□□ -1.98
CNOT1-221ENST00000569924 FOXC2Q99958 501 aa2.68□□□□□ -1.98
CNOT1-221ENST00000569924 OVOL2Q9BRP0 275 aa2.68□□□□□ -1.98
CNOT1-221ENST00000569924 TMEM121Q9BTD3 319 aa2.68□□□□□ -1.98
CNOT1-221ENST00000569924 HES7Q9BYE0 225 aa2.68□□□□□ -1.98
CNOT1-221ENST00000569924 FRMD8P1Q9BZ68 369 aaPredicted RBP2.68□□□□□ -1.98
CNOT1-221ENST00000569924 IL22Q9GZX6 179 aa2.68□□□□□ -1.98
CNOT1-221ENST00000569924 NARFLQ9H6Q4 476 aa2.68□□□□□ -1.98
CNOT1-221ENST00000569924 TRIM45Q9H8W5 580 aaPredicted RBP2.68□□□□□ -1.98
CNOT1-221ENST00000569924 MTHFD2LQ9H903 347 aaPredicted RBP2.68□□□□□ -1.98
CNOT1-221ENST00000569924 SLC17A5Q9NRA2 495 aa2.68□□□□□ -1.98
CNOT1-221ENST00000569924 CHRAC1Q9NRG0 131 aa2.68□□□□□ -1.98
CNOT1-221ENST00000569924 TREX1Q9NSU2 369 aa2.68□□□□□ -1.98
CNOT1-221ENST00000569924 STOX2Q9P2F5 926 aaPredicted RBP2.68□□□□□ -1.98
CNOT1-221ENST00000569924 PCYOX1Q9UHG3 505 aa2.68□□□□□ -1.98
CNOT1-221ENST00000569924 ZNF221Q9UK13 617 aa2.68□□□□□ -1.98
CNOT1-221ENST00000569924 ABCG2Q9UNQ0 655 aa2.68□□□□□ -1.98
CNOT1-221ENST00000569924 TCF19Q9Y242 345 aa2.68□□□□□ -1.98
CNOT1-221ENST00000569924 GMPPBQ9Y5P6 360 aa2.68□□□□□ -1.98
CNOT1-221ENST00000569924 PRRC2AP48634 2157 aaKnown RBP2.68□□□□□ -1.98
CNOT1-221ENST00000569924 DNAJC13O75165 2243 aa2.68□□□□□ -1.98
CNOT1-221ENST00000569924 DOCK7Q96N67 2140 aa2.68□□□□□ -1.98
CNOT1-221ENST00000569924 ZNF407Q9C0G0 2248 aa2.67□□□□□ -1.98
CNOT1-221ENST00000569924 IGHV3-20A0A0C4DH32 117 aa2.67□□□□□ -1.98
CNOT1-221ENST00000569924 LOC100653049A0A140TA62 436 aa2.67□□□□□ -1.98
CNOT1-221ENST00000569924 A0A1B0GTH9 108 aa2.67□□□□□ -1.98
CNOT1-221ENST00000569924 SMCO3A2RU48 225 aa2.67□□□□□ -1.98
CNOT1-221ENST00000569924 USP27XA6NNY8 438 aa2.67□□□□□ -1.98
CNOT1-221ENST00000569924 C16orf97H3BN30 126 aa2.67□□□□□ -1.98
CNOT1-221ENST00000569924 KLRC4-KLRK1H3BQV0 150 aa2.67□□□□□ -1.98
CNOT1-221ENST00000569924 GFYI3L273 518 aa2.67□□□□□ -1.98
CNOT1-221ENST00000569924 LSM1O15116 133 aaKnown RBP2.67□□□□□ -1.98
CNOT1-221ENST00000569924 TNFSF12O43508 249 aa2.67□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms