RNA–Protein interactions for RNA: ENST00000568338.1

KLHDC4-220, Transcript of kelch domain containing 4, humanhuman

TSL 4

Gene KLHDC4, Length 584 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KLHDC4-220ENST00000568338 TEX30Q5JUR7 227 aa7.54□□□□□ -1.2
KLHDC4-220ENST00000568338 TSPO2Q5TGU0 170 aa7.54□□□□□ -1.2
KLHDC4-220ENST00000568338 SLC18B1Q6NT16 456 aa7.54□□□□□ -1.2
KLHDC4-220ENST00000568338 FOXL2NBQ6ZUU3 175 aa7.54□□□□□ -1.2
KLHDC4-220ENST00000568338 NUFIP2Q7Z417 695 aaKnown RBP7.54□□□□□ -1.2
KLHDC4-220ENST00000568338 ZSCAN2Q7Z7L9 614 aaPredicted RBP7.54□□□□□ -1.2
KLHDC4-220ENST00000568338 LHFPL3Q86UP9 236 aa7.54□□□□□ -1.2
KLHDC4-220ENST00000568338 GCNT2Q8N0V5 402 aa7.54□□□□□ -1.2
KLHDC4-220ENST00000568338 NANOGP1Q8N7R0 232 aa7.54□□□□□ -1.2
KLHDC4-220ENST00000568338 OR6K3Q8NGY3 331 aa7.54□□□□□ -1.2
KLHDC4-220ENST00000568338 OR52N1Q8NH53 320 aa7.54□□□□□ -1.2
KLHDC4-220ENST00000568338 OTOSQ8NHW6 89 aa7.54□□□□□ -1.2
KLHDC4-220ENST00000568338 ASB17Q8WXJ9 295 aa7.54□□□□□ -1.2
KLHDC4-220ENST00000568338 C11orf40Q8WZ69 217 aa7.54□□□□□ -1.2
KLHDC4-220ENST00000568338 FOXN4Q96NZ1 517 aa7.54□□□□□ -1.2
KLHDC4-220ENST00000568338 ALG8Q9BVK2 526 aa7.54□□□□□ -1.2
KLHDC4-220ENST00000568338 RBM24Q9BX46 236 aaKnown RBP7.54□□□□□ -1.2
KLHDC4-220ENST00000568338 NELFAQ9H3P2 528 aa7.54□□□□□ -1.2
KLHDC4-220ENST00000568338 C12orf49Q9H741 205 aa7.54□□□□□ -1.2
KLHDC4-220ENST00000568338 SEC61A2Q9H9S3 476 aa7.54□□□□□ -1.2
KLHDC4-220ENST00000568338 CRLF2Q9HC73 371 aa7.54□□□□□ -1.2
KLHDC4-220ENST00000568338 GPR35Q9HC97 309 aa7.54□□□□□ -1.2
KLHDC4-220ENST00000568338 UPB1Q9UBR1 384 aa7.54□□□□□ -1.2
KLHDC4-220ENST00000568338 MALT1Q9UDY8 824 aa7.54□□□□□ -1.2
KLHDC4-220ENST00000568338 CLEC2DQ9UHP7 191 aa7.54□□□□□ -1.2
KLHDC4-220ENST00000568338 LAMP5Q9UJQ1 280 aa7.54□□□□□ -1.2
KLHDC4-220ENST00000568338 POLR1DQ9Y2S0 133 aa7.54□□□□□ -1.2
KLHDC4-220ENST00000568338 LSM2Q9Y333 95 aaKnown RBP7.54□□□□□ -1.2
KLHDC4-220ENST00000568338 UGT2A1Q9Y4X1 527 aa7.54□□□□□ -1.2
KLHDC4-220ENST00000568338 FAM215AQ9Y5M1 114 aa7.54□□□□□ -1.2
KLHDC4-220ENST00000568338 COL6A5A8TX70 2615 aa7.54□□□□□ -1.2
KLHDC4-220ENST00000568338 RPL36A-HNRNPH2H7BZ11 118 aa7.53□□□□□ -1.2
KLHDC4-220ENST00000568338 ZNF593O00488 134 aaPredicted RBP7.53□□□□□ -1.2
KLHDC4-220ENST00000568338 MPZL1O95297 269 aa7.53□□□□□ -1.2
KLHDC4-220ENST00000568338 MT-ND5P03915 603 aa7.53□□□□□ -1.2
KLHDC4-220ENST00000568338 TMIGD3P0DMS9 266 aaPredicted RBP7.53□□□□□ -1.2
KLHDC4-220ENST00000568338 CDAP32320 146 aa7.53□□□□□ -1.2
KLHDC4-220ENST00000568338 TIMP3P35625 211 aa7.53□□□□□ -1.2
KLHDC4-220ENST00000568338 TAS2R43P59537 309 aa7.53□□□□□ -1.2
KLHDC4-220ENST00000568338 LSM6P62312 80 aaKnown RBP7.53□□□□□ -1.2
KLHDC4-220ENST00000568338 SIRPAP78324 504 aa7.53□□□□□ -1.2
KLHDC4-220ENST00000568338 MRPS34P82930 218 aaKnown RBP7.53□□□□□ -1.2
KLHDC4-220ENST00000568338 ZNF85Q03923 595 aa7.53□□□□□ -1.2
KLHDC4-220ENST00000568338 RAB39AQ14964 217 aa7.53□□□□□ -1.2
KLHDC4-220ENST00000568338 MEP1BQ16820 701 aa7.53□□□□□ -1.2
KLHDC4-220ENST00000568338 PCK2Q16822 640 aa7.53□□□□□ -1.2
KLHDC4-220ENST00000568338 TIGD6Q17RP2 521 aa7.53□□□□□ -1.2
KLHDC4-220ENST00000568338 CEACAM16Q2WEN9 425 aa7.53□□□□□ -1.2
KLHDC4-220ENST00000568338 NRN1LQ496H8 165 aa7.53□□□□□ -1.2
KLHDC4-220ENST00000568338 CDONQ4KMG0 1287 aa7.53□□□□□ -1.2
KLHDC4-220ENST00000568338 SYT6Q5T7P8 510 aaPredicted RBP7.53□□□□□ -1.2
KLHDC4-220ENST00000568338 OR2G6Q5TZ20 316 aa7.53□□□□□ -1.2
KLHDC4-220ENST00000568338 RTL6Q6ICC9 239 aa7.53□□□□□ -1.2
KLHDC4-220ENST00000568338 MYO7BQ6PIF6 2116 aa7.53□□□□□ -1.2
KLHDC4-220ENST00000568338 ZNF322Q6U7Q0 402 aaPredicted RBP7.53□□□□□ -1.2
KLHDC4-220ENST00000568338 PAMR1Q6UXH9 720 aa7.53□□□□□ -1.2
KLHDC4-220ENST00000568338 ZC3HAV1Q7Z2W4 902 aaKnown RBP7.53□□□□□ -1.2
KLHDC4-220ENST00000568338 DPY19L4Q7Z388 723 aa7.53□□□□□ -1.2
KLHDC4-220ENST00000568338 FAM220AQ7Z4H9 259 aa7.53□□□□□ -1.2
KLHDC4-220ENST00000568338 GPR141Q7Z602 305 aa7.53□□□□□ -1.2
KLHDC4-220ENST00000568338 EGFL6Q8IUX8 553 aa7.53□□□□□ -1.2
KLHDC4-220ENST00000568338 SYS1Q8N2H4 156 aa7.53□□□□□ -1.2
KLHDC4-220ENST00000568338 UBE2J2Q8N2K1 259 aa7.53□□□□□ -1.2
KLHDC4-220ENST00000568338 RFLNBQ8N5W9 214 aa7.53□□□□□ -1.2
KLHDC4-220ENST00000568338 CNEP1R1Q8N9A8 125 aa7.53□□□□□ -1.2
KLHDC4-220ENST00000568338 SMAP2Q8WU79 429 aaPredicted RBP7.53□□□□□ -1.2
KLHDC4-220ENST00000568338 SNX33Q8WV41 574 aa7.53□□□□□ -1.2
KLHDC4-220ENST00000568338 FOXB1Q99853 325 aa7.53□□□□□ -1.2
KLHDC4-220ENST00000568338 ZNF649Q9BS31 505 aa7.53□□□□□ -1.2
KLHDC4-220ENST00000568338 TTYH2Q9BSA4 534 aa7.53□□□□□ -1.2
KLHDC4-220ENST00000568338 CDADC1Q9BWV3 514 aa7.53□□□□□ -1.2
KLHDC4-220ENST00000568338 POLE4Q9NR33 117 aa7.53□□□□□ -1.2
KLHDC4-220ENST00000568338 SLC7A10Q9NS82 523 aa7.53□□□□□ -1.2
KLHDC4-220ENST00000568338 COPS3Q9UNS2 423 aa7.53□□□□□ -1.2
KLHDC4-220ENST00000568338 ZGRF1Q86YA3 2104 aa7.52□□□□□ -1.2
KLHDC4-220ENST00000568338 PRRC2AP48634 2157 aaKnown RBP7.52□□□□□ -1.21
KLHDC4-220ENST00000568338 NCOA6Q14686 2063 aaPredicted RBP7.52□□□□□ -1.21
KLHDC4-220ENST00000568338 HSPB2A8KAH6 182 aa7.52□□□□□ -1.21
KLHDC4-220ENST00000568338 RNF212BA8MTL3 300 aa7.52□□□□□ -1.21
KLHDC4-220ENST00000568338 SEC14L2O76054 403 aa7.52□□□□□ -1.21
KLHDC4-220ENST00000568338 INMTO95050 263 aa7.52□□□□□ -1.21
KLHDC4-220ENST00000568338 FARS2O95363 451 aaKnown RBP7.52□□□□□ -1.21
KLHDC4-220ENST00000568338 CNOT4O95628 575 aaKnown RBP7.52□□□□□ -1.21
KLHDC4-220ENST00000568338 IGHV3-9P01782 118 aa7.52□□□□□ -1.21
KLHDC4-220ENST00000568338 KRT8P05787 483 aa7.52□□□□□ -1.21
KLHDC4-220ENST00000568338 TACSTD2P09758 323 aa7.52□□□□□ -1.21
KLHDC4-220ENST00000568338 HSMCR30P0CW71 290 aa7.52□□□□□ -1.21
KLHDC4-220ENST00000568338 ALOX5APP20292 161 aa7.52□□□□□ -1.21
KLHDC4-220ENST00000568338 EDNRAP25101 427 aa7.52□□□□□ -1.21
KLHDC4-220ENST00000568338 RPS27P42677 84 aaKnown RBP7.52□□□□□ -1.21
KLHDC4-220ENST00000568338 KIR2DL2P43627 348 aaPredicted RBP7.52□□□□□ -1.21
KLHDC4-220ENST00000568338 HCCSP53701 268 aa7.52□□□□□ -1.21
KLHDC4-220ENST00000568338 GP2P55259 537 aaKnown RBP7.52□□□□□ -1.21
KLHDC4-220ENST00000568338 SH3BGRP55822 239 aaPredicted RBP7.52□□□□□ -1.21
KLHDC4-220ENST00000568338 BDH1Q02338 343 aa7.52□□□□□ -1.21
KLHDC4-220ENST00000568338 EGR3Q06889 387 aa7.52□□□□□ -1.21
KLHDC4-220ENST00000568338 FAPQ12884 760 aa7.52□□□□□ -1.21
KLHDC4-220ENST00000568338 MLLT11Q13015 90 aaPredicted RBP7.52□□□□□ -1.21
KLHDC4-220ENST00000568338 AQP6Q13520 282 aa7.52□□□□□ -1.21
KLHDC4-220ENST00000568338 EIF2B1Q14232 305 aaKnown RBP7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms