RNA–Protein interactions for RNA: ENST00000568294.5

HDGFL3-206, Transcript of HDGF like 3, humanhuman

TSL 4

Gene HDGFL3, Length 3,397 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-206ENST00000568294 A0A0G2JNG1 304 aa8.04□□□□□ -1.12
HDGFL3-206ENST00000568294 D6RAR5 112 aa8.04□□□□□ -1.12
HDGFL3-206ENST00000568294 NPIPB9F8W1W9 429 aa8.04□□□□□ -1.12
HDGFL3-206ENST00000568294 G3V3Y1 287 aa8.04□□□□□ -1.12
HDGFL3-206ENST00000568294 KIR2DS3K7RE56 304 aa8.04□□□□□ -1.12
HDGFL3-206ENST00000568294 SLC33A1O00400 549 aaPredicted RBP8.04□□□□□ -1.12
HDGFL3-206ENST00000568294 ZNHIT1O43257 154 aa8.04□□□□□ -1.12
HDGFL3-206ENST00000568294 KNG1P01042 644 aa8.04□□□□□ -1.12
HDGFL3-206ENST00000568294 ABOP16442 354 aa8.04□□□□□ -1.12
HDGFL3-206ENST00000568294 SLC37A1P57057 533 aa8.04□□□□□ -1.12
HDGFL3-206ENST00000568294 RPS4XP62701 263 aaKnown RBP8.04□□□□□ -1.12
HDGFL3-206ENST00000568294 KIR2DS5Q14953 304 aa8.04□□□□□ -1.12
HDGFL3-206ENST00000568294 EEF1A1P5Q5VTE0 462 aa8.04□□□□□ -1.12
HDGFL3-206ENST00000568294 SLC36A1Q7Z2H8 476 aa8.04□□□□□ -1.12
HDGFL3-206ENST00000568294 WDFY1Q8IWB7 410 aa8.04□□□□□ -1.12
HDGFL3-206ENST00000568294 ZNF679Q8IYX0 411 aa8.04□□□□□ -1.12
HDGFL3-206ENST00000568294 SPICQ8N5J4 248 aa8.04□□□□□ -1.12
HDGFL3-206ENST00000568294 BHLHE23Q8NDY6 225 aa8.04□□□□□ -1.12
HDGFL3-206ENST00000568294 BVESQ8NE79 360 aa8.04□□□□□ -1.12
HDGFL3-206ENST00000568294 OR6N1Q8NGY5 312 aa8.04□□□□□ -1.12
HDGFL3-206ENST00000568294 MARCH1Q8TCQ1 289 aa8.04□□□□□ -1.12
HDGFL3-206ENST00000568294 TMED6Q8WW62 240 aa8.04□□□□□ -1.12
HDGFL3-206ENST00000568294 ASB5Q8WWX0 329 aa8.04□□□□□ -1.12
HDGFL3-206ENST00000568294 ST6GALNAC5Q9BVH7 336 aa8.04□□□□□ -1.12
HDGFL3-206ENST00000568294 SLC6A15Q9H2J7 730 aa8.04□□□□□ -1.12
HDGFL3-206ENST00000568294 EXOSC3Q9NQT5 275 aaKnown RBP8.04□□□□□ -1.12
HDGFL3-206ENST00000568294 POLE3Q9NRF9 147 aa8.04□□□□□ -1.12
HDGFL3-206ENST00000568294 COPS7AQ9UBW8 275 aa8.04□□□□□ -1.12
HDGFL3-206ENST00000568294 VSIG4Q9Y279 399 aa8.04□□□□□ -1.12
HDGFL3-206ENST00000568294 ETV7Q9Y603 341 aa8.04□□□□□ -1.12
HDGFL3-206ENST00000568294 TRAV14DV4A0A0A6YYC5 116 aa8.04□□□□□ -1.12
HDGFL3-206ENST00000568294 SPTY2D1-AS1A0A0U1RR47 76 aa8.04□□□□□ -1.12
HDGFL3-206ENST00000568294 A0A1W2PNR3 127 aa8.04□□□□□ -1.12
HDGFL3-206ENST00000568294 PRAMEF26H0Y7S4 382 aa8.04□□□□□ -1.12
HDGFL3-206ENST00000568294 SLC17A2O00624 439 aa8.04□□□□□ -1.12
HDGFL3-206ENST00000568294 ADAP1O75689 374 aa8.04□□□□□ -1.12
HDGFL3-206ENST00000568294 HCKP08631 526 aa8.04□□□□□ -1.12
HDGFL3-206ENST00000568294 ACTBP60709 375 aa8.04□□□□□ -1.12
HDGFL3-206ENST00000568294 ACTG1P63261 375 aa8.04□□□□□ -1.12
HDGFL3-206ENST00000568294 ARFRP1Q13795 201 aa8.04□□□□□ -1.12
HDGFL3-206ENST00000568294 CCINQ13939 588 aa8.04□□□□□ -1.12
HDGFL3-206ENST00000568294 ZNF684Q5T5D7 378 aa8.04□□□□□ -1.12
HDGFL3-206ENST00000568294 C1orf140Q5VVS0 124 aa8.04□□□□□ -1.12
HDGFL3-206ENST00000568294 KCTD18Q6PI47 426 aaPredicted RBP8.04□□□□□ -1.12
HDGFL3-206ENST00000568294 CLEC9AQ6UXN8 241 aa8.04□□□□□ -1.12
HDGFL3-206ENST00000568294 OR1S2Q8NGQ3 325 aa8.04□□□□□ -1.12
HDGFL3-206ENST00000568294 GPBAR1Q8TDU6 330 aa8.04□□□□□ -1.12
HDGFL3-206ENST00000568294 ELP5Q8TE02 316 aa8.04□□□□□ -1.12
HDGFL3-206ENST00000568294 CCDC107Q8WV48 283 aa8.04□□□□□ -1.12
HDGFL3-206ENST00000568294 SCARF2Q96GP6 870 aaPredicted RBP8.04□□□□□ -1.12
HDGFL3-206ENST00000568294 CNTD2Q9H8S5 307 aa8.04□□□□□ -1.12
HDGFL3-206ENST00000568294 KIF25Q9UIL4 384 aa8.04□□□□□ -1.12
HDGFL3-206ENST00000568294 GMEB2Q9UKD1 530 aa8.04□□□□□ -1.12
HDGFL3-206ENST00000568294 OR52A1Q9UKL2 312 aa8.04□□□□□ -1.12
HDGFL3-206ENST00000568294 PCOLCE2Q9UKZ9 415 aa8.04□□□□□ -1.12
HDGFL3-206ENST00000568294 C2orf16Q68DN1 1984 aa8.04□□□□□ -1.12
HDGFL3-206ENST00000568294 TRBV5-5A0A0J9YX44 114 aa8.04□□□□□ -1.12
HDGFL3-206ENST00000568294 SNRPGP15A8MWD9 76 aa8.04□□□□□ -1.12
HDGFL3-206ENST00000568294 SYT7O43581 403 aa8.04□□□□□ -1.12
HDGFL3-206ENST00000568294 SULT1B1O43704 296 aa8.04□□□□□ -1.12
HDGFL3-206ENST00000568294 SCGB1D2O95969 90 aa8.04□□□□□ -1.12
HDGFL3-206ENST00000568294 SFTPBP07988 381 aa8.04□□□□□ -1.12
HDGFL3-206ENST00000568294 ERCC1P07992 297 aaPredicted RBP8.04□□□□□ -1.12
HDGFL3-206ENST00000568294 GIMD1P0DJR0 217 aa8.04□□□□□ -1.12
HDGFL3-206ENST00000568294 PGAM2P15259 253 aa8.04□□□□□ -1.12
HDGFL3-206ENST00000568294 CSNK1EP49674 416 aaKnown RBP8.04□□□□□ -1.12
HDGFL3-206ENST00000568294 RPL27P61353 136 aaKnown RBP8.04□□□□□ -1.12
HDGFL3-206ENST00000568294 MRPS10P82664 201 aaKnown RBP8.04□□□□□ -1.12
HDGFL3-206ENST00000568294 GLO1Q04760 184 aa8.04□□□□□ -1.12
HDGFL3-206ENST00000568294 CHAF1BQ13112 559 aa8.04□□□□□ -1.12
HDGFL3-206ENST00000568294 ABHD12BQ7Z5M8 362 aaPredicted RBP8.04□□□□□ -1.12
HDGFL3-206ENST00000568294 SLC51BQ86UW2 128 aa8.04□□□□□ -1.12
HDGFL3-206ENST00000568294 C9orf40Q8IXQ3 194 aa8.04□□□□□ -1.12
HDGFL3-206ENST00000568294 INO80EQ8NBZ0 244 aaPredicted RBP8.04□□□□□ -1.12
HDGFL3-206ENST00000568294 CLEC1AQ8NC01 280 aa8.04□□□□□ -1.12
HDGFL3-206ENST00000568294 OR10R2Q8NGX6 335 aa8.04□□□□□ -1.12
HDGFL3-206ENST00000568294 THAP6Q8TBB0 222 aa8.04□□□□□ -1.12
HDGFL3-206ENST00000568294 C8orf44Q96CB5 159 aa8.04□□□□□ -1.12
HDGFL3-206ENST00000568294 HRH4Q9H3N8 390 aa8.04□□□□□ -1.12
HDGFL3-206ENST00000568294 FBXO9Q9UK97 447 aaPredicted RBP8.04□□□□□ -1.12
HDGFL3-206ENST00000568294 HHLA2Q9UM44 414 aa8.04□□□□□ -1.12
HDGFL3-206ENST00000568294 FAM96BQ9Y3D0 163 aa8.04□□□□□ -1.12
HDGFL3-206ENST00000568294 CLDN16Q9Y5I7 305 aa8.04□□□□□ -1.12
HDGFL3-206ENST00000568294 PCNX3Q9H6A9 2034 aa8.03□□□□□ -1.12
HDGFL3-206ENST00000568294 STK17BO94768 372 aa8.03□□□□□ -1.12
HDGFL3-206ENST00000568294 HOXB5P09067 269 aa8.03□□□□□ -1.12
HDGFL3-206ENST00000568294 CPN1P15169 458 aa8.03□□□□□ -1.12
HDGFL3-206ENST00000568294 CD96P40200 585 aa8.03□□□□□ -1.12
HDGFL3-206ENST00000568294 SLC6A9P48067 706 aa8.03□□□□□ -1.12
HDGFL3-206ENST00000568294 LBX1P52954 281 aa8.03□□□□□ -1.12
HDGFL3-206ENST00000568294 BIDP55957 195 aa8.03□□□□□ -1.12
HDGFL3-206ENST00000568294 TLE3Q04726 772 aa8.03□□□□□ -1.12
HDGFL3-206ENST00000568294 TOMM20Q15388 145 aa8.03□□□□□ -1.12
HDGFL3-206ENST00000568294 LCN10Q6JVE6 187 aa8.03□□□□□ -1.12
HDGFL3-206ENST00000568294 RTL10Q7L3V2 364 aa8.03□□□□□ -1.12
HDGFL3-206ENST00000568294 SLC29A4Q7RTT9 530 aa8.03□□□□□ -1.12
HDGFL3-206ENST00000568294 OR2W3Q7Z3T1 314 aa8.03□□□□□ -1.12
HDGFL3-206ENST00000568294 LRRC75AQ8NAA5 344 aa8.03□□□□□ -1.12
HDGFL3-206ENST00000568294 OR51E1Q8TCB6 317 aa8.03□□□□□ -1.12
HDGFL3-206ENST00000568294 MRPS24Q96EL2 167 aaKnown RBP8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms