RNA–Protein interactions for RNA: ENST00000567737.1

SMG1-213, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, human

TSL 3

Gene SMG1, Length 721 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SMG1-213	ENST00000567737	EGFEM1P	Q0D2K5	195 aa		11.28	□□□□□ -0.6
SMG1-213	ENST00000567737	KCNJ8	Q15842	424 aa		11.28	□□□□□ -0.6
SMG1-213	ENST00000567737	SGCA	Q16586	387 aa		11.28	□□□□□ -0.6
SMG1-213	ENST00000567737	CDON	Q4KMG0	1287 aa		11.28	□□□□□ -0.6
SMG1-213	ENST00000567737	C19orf18	Q8NEA5	215 aa		11.28	□□□□□ -0.6
SMG1-213	ENST00000567737	DPF1	Q92782	380 aa		11.28	□□□□□ -0.6
SMG1-213	ENST00000567737	TMEM43	Q9BTV4	400 aa		11.28	□□□□□ -0.6
SMG1-213	ENST00000567737	NPFFR1	Q9GZQ6	430 aa		11.28	□□□□□ -0.6
SMG1-213	ENST00000567737	RAB18	Q9NP72	206 aa		11.28	□□□□□ -0.6
SMG1-213	ENST00000567737	TBCCD1	Q9NVR7	557 aa		11.28	□□□□□ -0.6
SMG1-213	ENST00000567737	TAS2R5	Q9NYW4	299 aa		11.28	□□□□□ -0.6
SMG1-213	ENST00000567737	NDRG4	Q9ULP0	352 aa	Known RBP	11.28	□□□□□ -0.6
SMG1-213	ENST00000567737	TMCC3	Q9ULS5	477 aa		11.28	□□□□□ -0.6
SMG1-213	ENST00000567737	MAB21L2	Q9Y586	359 aa		11.28	□□□□□ -0.6
SMG1-213	ENST00000567737	KPTN	Q9Y664	436 aa		11.28	□□□□□ -0.6
SMG1-213	ENST00000567737	PF4V1	P10720	104 aa		11.27	□□□□□ -0.61
SMG1-213	ENST00000567737	HOXD3	P31249	432 aa	Predicted RBP	11.27	□□□□□ -0.61
SMG1-213	ENST00000567737	C10orf128	Q5T292	105 aa		11.27	□□□□□ -0.61
SMG1-213	ENST00000567737	OR11L1	Q8NGX0	322 aa		11.27	□□□□□ -0.61
SMG1-213	ENST00000567737	OR13G1	Q8NGZ3	307 aa		11.27	□□□□□ -0.61
SMG1-213	ENST00000567737	IFT81	Q8WYA0	676 aa		11.27	□□□□□ -0.61
SMG1-213	ENST00000567737	NSMAF	Q92636	917 aa		11.27	□□□□□ -0.61
SMG1-213	ENST00000567737	PTP4A1	Q93096	173 aa		11.27	□□□□□ -0.61
SMG1-213	ENST00000567737	NABP1	Q96AH0	204 aa		11.27	□□□□□ -0.61
SMG1-213	ENST00000567737	COG8	Q96MW5	612 aa		11.27	□□□□□ -0.61
SMG1-213	ENST00000567737	MEAF6	Q9HAF1	191 aa		11.27	□□□□□ -0.61
SMG1-213	ENST00000567737	TMEM27	Q9HBJ8	222 aa		11.27	□□□□□ -0.61
SMG1-213	ENST00000567737	TIMM10B	Q9Y5J6	103 aa		11.27	□□□□□ -0.61
SMG1-213	ENST00000567737		A0A0B4J2E0	115 aa		11.26	□□□□□ -0.61
SMG1-213	ENST00000567737		A0A1B0GX12	115 aa		11.26	□□□□□ -0.61
SMG1-213	ENST00000567737		A0A1W2PRD5	423 aa		11.26	□□□□□ -0.61
SMG1-213	ENST00000567737		A0A1W2PRF3	423 aa		11.26	□□□□□ -0.61
SMG1-213	ENST00000567737		A0A1W2PRM7	423 aa		11.26	□□□□□ -0.61
SMG1-213	ENST00000567737	CENPBD1	B2RD01	187 aa		11.26	□□□□□ -0.61
SMG1-213	ENST00000567737	MCIDAS	D6RGH6	385 aa		11.26	□□□□□ -0.61
SMG1-213	ENST00000567737	FBP2	O00757	339 aa		11.26	□□□□□ -0.61
SMG1-213	ENST00000567737	NPFF	O15130	113 aa		11.26	□□□□□ -0.61
SMG1-213	ENST00000567737	ADAM20	O43506	726 aa		11.26	□□□□□ -0.61
SMG1-213	ENST00000567737	OR10H3	O60404	316 aa		11.26	□□□□□ -0.61
SMG1-213	ENST00000567737	SLC2A10	O95528	541 aa		11.26	□□□□□ -0.61
SMG1-213	ENST00000567737	PF4	P02776	101 aa		11.26	□□□□□ -0.61
SMG1-213	ENST00000567737	FAH	P16930	419 aa		11.26	□□□□□ -0.61
SMG1-213	ENST00000567737	LMO1	P25800	156 aa		11.26	□□□□□ -0.61
SMG1-213	ENST00000567737	PMEL	P40967	661 aa		11.26	□□□□□ -0.61
SMG1-213	ENST00000567737	ERF	P50548	548 aa		11.26	□□□□□ -0.61
SMG1-213	ENST00000567737	PCBD1	P61457	104 aa		11.26	□□□□□ -0.61
SMG1-213	ENST00000567737	LRRC74A	Q0VAA2	488 aa		11.26	□□□□□ -0.61
SMG1-213	ENST00000567737	LY6E	Q16553	131 aa		11.26	□□□□□ -0.61
SMG1-213	ENST00000567737	METAP1D	Q6UB28	335 aa	Predicted RBP	11.26	□□□□□ -0.61
SMG1-213	ENST00000567737	LYPD4	Q6UWN0	246 aa		11.26	□□□□□ -0.61
SMG1-213	ENST00000567737	BTN2A1	Q7KYR7	527 aa		11.26	□□□□□ -0.61
SMG1-213	ENST00000567737	MEPCE	Q7L2J0	689 aa	Known RBP	11.26	□□□□□ -0.61
SMG1-213	ENST00000567737	HDDC2	Q7Z4H3	204 aa		11.26	□□□□□ -0.61
SMG1-213	ENST00000567737	OR8G5	Q8NG78	346 aa		11.26	□□□□□ -0.61
SMG1-213	ENST00000567737	MRPL13	Q9BYD1	178 aa	Known RBP	11.26	□□□□□ -0.61
SMG1-213	ENST00000567737	FAM234A	Q9H0X4	552 aa		11.26	□□□□□ -0.61
SMG1-213	ENST00000567737	PALMD	Q9NP74	551 aa		11.26	□□□□□ -0.61
SMG1-213	ENST00000567737	THUMPD1	Q9NXG2	353 aa	Known RBP	11.26	□□□□□ -0.61
SMG1-213	ENST00000567737	RPUSD1	Q9UJJ7	312 aa	Known RBP	11.26	□□□□□ -0.61
SMG1-213	ENST00000567737	MEIOC	A2RUB1	952 aa		11.25	□□□□□ -0.61
SMG1-213	ENST00000567737		F5H5P2	479 aa		11.25	□□□□□ -0.61
SMG1-213	ENST00000567737	PEX14	O75381	377 aa		11.25	□□□□□ -0.61
SMG1-213	ENST00000567737	ECD	O95905	644 aa	Predicted RBP	11.25	□□□□□ -0.61
SMG1-213	ENST00000567737	HIST1H2AB	P04908	130 aa		11.25	□□□□□ -0.61
SMG1-213	ENST00000567737	RAC2	P15153	192 aa		11.25	□□□□□ -0.61
SMG1-213	ENST00000567737	ALDH3A1	P30838	453 aa		11.25	□□□□□ -0.61
SMG1-213	ENST00000567737	PRKAR1B	P31321	381 aa		11.25	□□□□□ -0.61
SMG1-213	ENST00000567737	ZNF133	P52736	654 aa	Predicted RBP	11.25	□□□□□ -0.61
SMG1-213	ENST00000567737	MVD	P53602	400 aa		11.25	□□□□□ -0.61
SMG1-213	ENST00000567737	OR1Q1	Q15612	314 aa		11.25	□□□□□ -0.61
SMG1-213	ENST00000567737	FAM27B	Q5VT28	67 aa		11.25	□□□□□ -0.61
SMG1-213	ENST00000567737	HIST3H2A	Q7L7L0	130 aa		11.25	□□□□□ -0.61
SMG1-213	ENST00000567737	HIST1H2AC	Q93077	130 aa		11.25	□□□□□ -0.61
SMG1-213	ENST00000567737	PPP1R36	Q96LQ0	422 aa		11.25	□□□□□ -0.61
SMG1-213	ENST00000567737	ZNF582	Q96NG8	517 aa	Predicted RBP	11.25	□□□□□ -0.61
SMG1-213	ENST00000567737	ZIM3	Q96PE6	472 aa		11.25	□□□□□ -0.61
SMG1-213	ENST00000567737	OR52E6	Q96RD3	313 aa		11.25	□□□□□ -0.61
SMG1-213	ENST00000567737	SEPHS2	Q99611	448 aa		11.25	□□□□□ -0.61
SMG1-213	ENST00000567737	SSX3	Q99909	188 aa		11.25	□□□□□ -0.61
SMG1-213	ENST00000567737	GPR61	Q9BZJ8	451 aa		11.25	□□□□□ -0.61
SMG1-213	ENST00000567737	PCDHAC1	Q9H158	963 aa		11.25	□□□□□ -0.61
SMG1-213	ENST00000567737	SMURF1	Q9HCE7	757 aa		11.25	□□□□□ -0.61
SMG1-213	ENST00000567737	NANS	Q9NR45	359 aa		11.25	□□□□□ -0.61
SMG1-213	ENST00000567737	SIRT7	Q9NRC8	400 aa		11.25	□□□□□ -0.61
SMG1-213	ENST00000567737	ONECUT1	Q9UBC0	465 aa		11.25	□□□□□ -0.61
SMG1-213	ENST00000567737	NKX1-2	Q9UD57	310 aa	Predicted RBP	11.25	□□□□□ -0.61
SMG1-213	ENST00000567737	STARD10	Q9Y365	291 aa		11.25	□□□□□ -0.61
SMG1-213	ENST00000567737	UGT2A1	Q9Y4X1	527 aa		11.25	□□□□□ -0.61
SMG1-213	ENST00000567737		A0A1W2PRG6	482 aa		11.24	□□□□□ -0.61
SMG1-213	ENST00000567737		A0A1W2PRX2	142 aa		11.24	□□□□□ -0.61
SMG1-213	ENST00000567737	RIPK2	O43353	540 aa		11.24	□□□□□ -0.61
SMG1-213	ENST00000567737	TRMU	O75648	421 aa	Known RBP	11.24	□□□□□ -0.61
SMG1-213	ENST00000567737	ZFPL1	O95159	310 aa		11.24	□□□□□ -0.61
SMG1-213	ENST00000567737	CH25H	O95992	272 aa		11.24	□□□□□ -0.61
SMG1-213	ENST00000567737	CST2	P09228	141 aa		11.24	□□□□□ -0.61
SMG1-213	ENST00000567737	UMPS	P11172	480 aa		11.24	□□□□□ -0.61
SMG1-213	ENST00000567737	ACADS	P16219	412 aa		11.24	□□□□□ -0.61
SMG1-213	ENST00000567737	ZNF26	P17031	533 aa	Predicted RBP	11.24	□□□□□ -0.61
SMG1-213	ENST00000567737	LOR	P23490	312 aa	Predicted RBP	11.24	□□□□□ -0.61
SMG1-213	ENST00000567737	LAP3	P28838	519 aa		11.24	□□□□□ -0.61

Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms