RNA–Protein interactions for RNA: ENST00000567003.1

PALB2-205, Transcript of partner and localizer of BRCA2, humanhuman

TSL 3

Gene PALB2, Length 789 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-205ENST00000567003 SLC30A8Q8IWU4 369 aa12.93□□□□□ -0.34
PALB2-205ENST00000567003 ATG16L2Q8NAA4 619 aa12.93□□□□□ -0.34
PALB2-205ENST00000567003 LIPHQ8WWY8 451 aa12.93□□□□□ -0.34
PALB2-205ENST00000567003 CITED1Q99966 193 aa12.93□□□□□ -0.34
PALB2-205ENST00000567003 TMEM246Q9BRR3 403 aa12.93□□□□□ -0.34
PALB2-205ENST00000567003 CHIAQ9BZP6 476 aa12.93□□□□□ -0.34
PALB2-205ENST00000567003 BEX1Q9HBH7 125 aa12.93□□□□□ -0.34
PALB2-205ENST00000567003 POLE4Q9NR33 117 aa12.93□□□□□ -0.34
PALB2-205ENST00000567003 NDRG4Q9ULP0 352 aaKnown RBP12.93□□□□□ -0.34
PALB2-205ENST00000567003 HIF3AQ9Y2N7 669 aa12.93□□□□□ -0.34
PALB2-205ENST00000567003 MED31Q9Y3C7 131 aa12.93□□□□□ -0.34
PALB2-205ENST00000567003 TRAV27A0A087WT01 109 aa12.92□□□□□ -0.34
PALB2-205ENST00000567003 GMNCA6NCL1 334 aa12.92□□□□□ -0.34
PALB2-205ENST00000567003 C12orf71A8MTZ7 269 aa12.92□□□□□ -0.34
PALB2-205ENST00000567003 PPIAL4GP0DN37 164 aa12.92□□□□□ -0.34
PALB2-205ENST00000567003 NR2C1P13056 603 aa12.92□□□□□ -0.34
PALB2-205ENST00000567003 GZMMP51124 257 aa12.92□□□□□ -0.34
PALB2-205ENST00000567003 FGF12P61328 243 aa12.92□□□□□ -0.34
PALB2-205ENST00000567003 HOXA4Q00056 320 aaPredicted RBP12.92□□□□□ -0.34
PALB2-205ENST00000567003 NFYCQ13952 458 aa12.92□□□□□ -0.34
PALB2-205ENST00000567003 OCLNQ16625 522 aa12.92□□□□□ -0.34
PALB2-205ENST00000567003 OR2T2Q6IF00 324 aa12.92□□□□□ -0.34
PALB2-205ENST00000567003 SLC27A4Q6P1M0 643 aa12.92□□□□□ -0.34
PALB2-205ENST00000567003 ARL9Q6T311 187 aa12.92□□□□□ -0.34
PALB2-205ENST00000567003 VASH1Q7L8A9 365 aaPredicted RBP12.92□□□□□ -0.34
PALB2-205ENST00000567003 MOGAT3Q86VF5 341 aa12.92□□□□□ -0.34
PALB2-205ENST00000567003 DPP10Q8N608 796 aa12.92□□□□□ -0.34
PALB2-205ENST00000567003 LRRC75AQ8NAA5 344 aa12.92□□□□□ -0.34
PALB2-205ENST00000567003 OR4F5Q8NH21 305 aa12.92□□□□□ -0.34
PALB2-205ENST00000567003 HAVCR1Q96D42 359 aa12.92□□□□□ -0.34
PALB2-205ENST00000567003 NEIL1Q96FI4 390 aaPredicted RBP12.92□□□□□ -0.34
PALB2-205ENST00000567003 MEGF10Q96KG7 1140 aa12.92□□□□□ -0.34
PALB2-205ENST00000567003 NUDT16L1Q9BRJ7 211 aaKnown RBP12.92□□□□□ -0.34
PALB2-205ENST00000567003 CDADC1Q9BWV3 514 aa12.92□□□□□ -0.34
PALB2-205ENST00000567003 TBCCD1Q9NVR7 557 aa12.92□□□□□ -0.34
PALB2-205ENST00000567003 PTTG3PQ9NZH4 202 aa12.92□□□□□ -0.34
PALB2-205ENST00000567003 ARMCX1Q9P291 453 aa12.92□□□□□ -0.34
PALB2-205ENST00000567003 RAB21Q9UL25 225 aa12.92□□□□□ -0.34
PALB2-205ENST00000567003 NDUFAF1Q9Y375 327 aa12.92□□□□□ -0.34
PALB2-205ENST00000567003 M0QZ24 198 aa12.91□□□□□ -0.34
PALB2-205ENST00000567003 ANGPT2O15123 496 aa12.91□□□□□ -0.34
PALB2-205ENST00000567003 SURF4O15260 269 aa12.91□□□□□ -0.34
PALB2-205ENST00000567003 CRYBA1P05813 215 aa12.91□□□□□ -0.34
PALB2-205ENST00000567003 DBHP09172 617 aa12.91□□□□□ -0.34
PALB2-205ENST00000567003 IFI30P13284 250 aa12.91□□□□□ -0.34
PALB2-205ENST00000567003 PMELP40967 661 aa12.91□□□□□ -0.34
PALB2-205ENST00000567003 GUCA1AP43080 201 aaPredicted RBP12.91□□□□□ -0.34
PALB2-205ENST00000567003 VMACQ2NL98 169 aa12.91□□□□□ -0.34
PALB2-205ENST00000567003 INTS11Q5TA45 600 aaKnown RBP12.91□□□□□ -0.34
PALB2-205ENST00000567003 LYPD2Q6UXB3 125 aa12.91□□□□□ -0.34
PALB2-205ENST00000567003 CCDC80Q76M96 950 aa12.91□□□□□ -0.34
PALB2-205ENST00000567003 FITM2Q8N6M3 262 aa12.91□□□□□ -0.34
PALB2-205ENST00000567003 C19orf18Q8NEA5 215 aa12.91□□□□□ -0.34
PALB2-205ENST00000567003 OR51A7Q8NH64 312 aa12.91□□□□□ -0.34
PALB2-205ENST00000567003 MMP27Q9H306 513 aa12.91□□□□□ -0.34
PALB2-205ENST00000567003 TMBIM4Q9HC24 238 aa12.91□□□□□ -0.34
PALB2-205ENST00000567003 MIOXQ9UGB7 285 aa12.91□□□□□ -0.34
PALB2-205ENST00000567003 KIR2DS1A0A191URI9 304 aa12.9□□□□□ -0.34
PALB2-205ENST00000567003 C22orf46C9J442 243 aa12.9□□□□□ -0.34
PALB2-205ENST00000567003 F5H5P2 479 aa12.9□□□□□ -0.34
PALB2-205ENST00000567003 MLNRO43193 412 aa12.9□□□□□ -0.34
PALB2-205ENST00000567003 SGCEO43556 437 aa12.9□□□□□ -0.34
PALB2-205ENST00000567003 IGF2P01344 180 aa12.9□□□□□ -0.34
PALB2-205ENST00000567003 SFTPBP07988 381 aa12.9□□□□□ -0.34
PALB2-205ENST00000567003 MELTFP08582 738 aa12.9□□□□□ -0.34
PALB2-205ENST00000567003 COX5BP10606 129 aa12.9□□□□□ -0.34
PALB2-205ENST00000567003 PITPNBP48739 271 aa12.9□□□□□ -0.34
PALB2-205ENST00000567003 GUCY1A3Q02108 690 aa12.9□□□□□ -0.34
PALB2-205ENST00000567003 FHL1Q13642 323 aa12.9□□□□□ -0.34
PALB2-205ENST00000567003 ASPHD2Q6ICH7 369 aa12.9□□□□□ -0.34
PALB2-205ENST00000567003 SYT9Q86SS6 491 aa12.9□□□□□ -0.34
PALB2-205ENST00000567003 OR8B3Q8NGG8 313 aa12.9□□□□□ -0.34
PALB2-205ENST00000567003 LRRC8CQ8TDW0 803 aa12.9□□□□□ -0.34
PALB2-205ENST00000567003 OR8B2Q96RD0 313 aa12.9□□□□□ -0.34
PALB2-205ENST00000567003 RBM4BQ9BQ04 359 aaKnown RBP12.9□□□□□ -0.34
PALB2-205ENST00000567003 PCGF1Q9BSM1 259 aa12.9□□□□□ -0.34
PALB2-205ENST00000567003 PRDM13Q9H4Q3 707 aa12.9□□□□□ -0.34
PALB2-205ENST00000567003 DNAH3Q8TD57 4116 aa12.9□□□□□ -0.34
PALB2-205ENST00000567003 A0A1B0GUS0 222 aa12.89□□□□□ -0.35
PALB2-205ENST00000567003 CLPSL1A2RUU4 121 aa12.89□□□□□ -0.35
PALB2-205ENST00000567003 NDUFA7O95182 113 aa12.89□□□□□ -0.35
PALB2-205ENST00000567003 TSPAN15O95858 294 aa12.89□□□□□ -0.35
PALB2-205ENST00000567003 VIMP08670 466 aaKnown RBP12.89□□□□□ -0.35
PALB2-205ENST00000567003 SCRN3Q0VDG4 424 aa12.89□□□□□ -0.35
PALB2-205ENST00000567003 ZNF404Q494X3 552 aa12.89□□□□□ -0.35
PALB2-205ENST00000567003 RABL3Q5HYI8 236 aa12.89□□□□□ -0.35
PALB2-205ENST00000567003 ZNF362Q5T0B9 420 aaPredicted RBP12.89□□□□□ -0.35
PALB2-205ENST00000567003 GPR157Q5UAW9 335 aa12.89□□□□□ -0.35
PALB2-205ENST00000567003 Q6YL49 198 aa12.89□□□□□ -0.35
PALB2-205ENST00000567003 BHLHE23Q8NDY6 225 aa12.89□□□□□ -0.35
PALB2-205ENST00000567003 OR13C2Q8NGS9 318 aa12.89□□□□□ -0.35
PALB2-205ENST00000567003 RASSF5Q8WWW0 418 aa12.89□□□□□ -0.35
PALB2-205ENST00000567003 PTP4A1Q93096 173 aa12.89□□□□□ -0.35
PALB2-205ENST00000567003 UBE2FQ969M7 185 aa12.89□□□□□ -0.35
PALB2-205ENST00000567003 BPIFA2Q96DR5 249 aa12.89□□□□□ -0.35
PALB2-205ENST00000567003 PLEKHA8Q96JA3 519 aa12.89□□□□□ -0.35
PALB2-205ENST00000567003 ADAM18Q9Y3Q7 739 aa12.89□□□□□ -0.35
PALB2-205ENST00000567003 A6NIZ1 184 aa12.88□□□□□ -0.35
PALB2-205ENST00000567003 FBP2O00757 339 aa12.88□□□□□ -0.35
PALB2-205ENST00000567003 IMPA2O14732 288 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms